RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 SIRPDQ9H106 197 aa12.79□□□□□ -0.36
SATB1-201ENST00000338745 SPAG11BQ08648 103 aa12.78□□□□□ -0.36
SATB1-201ENST00000338745 IGKV4-1P06312 121 aa12.78□□□□□ -0.36
SATB1-201ENST00000338745 C4orf3Q8WVX3 66 aa12.78□□□□□ -0.36
SATB1-201ENST00000338745 TEX49A0A1B0GTD5 131 aa12.78□□□□□ -0.36
SATB1-201ENST00000338745 SPTBN1Q01082 2364 aaKnown RBP12.78□□□□□ -0.36
SATB1-201ENST00000338745 MT-ATP8P03928 68 aa12.78□□□□□ -0.36
SATB1-201ENST00000338745 TM2D2Q9BX73 214 aa12.78□□□□□ -0.36
SATB1-201ENST00000338745 KLK12Q9UKR0 248 aa12.77□□□□□ -0.36
SATB1-201ENST00000338745 NDUFV3P56181 108 aaKnown RBP12.76□□□□□ -0.37
SATB1-201ENST00000338745 DEFB135Q30KP9 77 aa12.76□□□□□ -0.37
SATB1-201ENST00000338745 ATG2AQ2TAZ0 1938 aa12.76□□□□□ -0.37
SATB1-201ENST00000338745 H3BT86 120 aa12.76□□□□□ -0.37
SATB1-201ENST00000338745 MED14OSP0DP75 135 aa12.76□□□□□ -0.37
SATB1-201ENST00000338745 CEP290O15078 2479 aa12.76□□□□□ -0.37
SATB1-201ENST00000338745 TMEM263Q8WUH6 116 aaKnown RBP12.75□□□□□ -0.37
SATB1-201ENST00000338745 COX7BP24311 80 aa12.75□□□□□ -0.37
SATB1-201ENST00000338745 J3QKU1 62 aa12.75□□□□□ -0.37
SATB1-201ENST00000338745 MED13Q9UHV7 2174 aa12.75□□□□□ -0.37
SATB1-201ENST00000338745 ZFP36P26651 326 aaKnown RBP12.75□□□□□ -0.37
SATB1-201ENST00000338745 UNQ9165/PRO28630Q6UXU0 137 aa12.75□□□□□ -0.37
SATB1-201ENST00000338745 WT1P19544 449 aaPredicted RBP12.75□□□□□ -0.37
SATB1-201ENST00000338745 C4orf48Q5BLP8 95 aa12.75□□□□□ -0.37
SATB1-201ENST00000338745 LYPD6Q86Y78 171 aa12.75□□□□□ -0.37
SATB1-201ENST00000338745 MLST8Q9BVC4 326 aa12.74□□□□□ -0.37
SATB1-201ENST00000338745 TP73-AS1Q9UF72 201 aa12.74□□□□□ -0.37
SATB1-201ENST00000338745 C19orf71A6NCJ1 209 aa12.74□□□□□ -0.37
SATB1-201ENST00000338745 CXCL5P42830 114 aa12.74□□□□□ -0.37
SATB1-201ENST00000338745 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
SATB1-201ENST00000338745 TRBV6-1A0A0K0K1D8 114 aa12.73□□□□□ -0.37
SATB1-201ENST00000338745 GDF5OSQ5U4N7 250 aa12.73□□□□□ -0.37
SATB1-201ENST00000338745 SLPIP03973 132 aa12.73□□□□□ -0.37
SATB1-201ENST00000338745 FANCD2OSQ96PS1 177 aa12.73□□□□□ -0.37
SATB1-201ENST00000338745 A0A0J9YXY3 114 aa12.73□□□□□ -0.37
SATB1-201ENST00000338745 A0A0U1RQV1 116 aa12.72□□□□□ -0.37
SATB1-201ENST00000338745 IGLC6P0CF74 106 aa12.72□□□□□ -0.37
SATB1-201ENST00000338745 Q8N7P7 452 aa12.72□□□□□ -0.37
SATB1-201ENST00000338745 PIK3CD-AS1Q5SR53 167 aa12.71□□□□□ -0.37
SATB1-201ENST00000338745 LINC00322Q6ZN03 302 aaPredicted RBP12.71□□□□□ -0.37
SATB1-201ENST00000338745 RNF138Q8WVD3 245 aa12.71□□□□□ -0.37
SATB1-201ENST00000338745 ZNF80P51504 273 aaPredicted RBP12.71□□□□□ -0.38
SATB1-201ENST00000338745 PCNX2A6NKB5 2137 aa12.71□□□□□ -0.38
SATB1-201ENST00000338745 LINC00643Q86TS7 51 aa12.7□□□□□ -0.38
SATB1-201ENST00000338745 ENHOQ6UWT2 76 aa12.7□□□□□ -0.38
SATB1-201ENST00000338745 PIP4P1Q86T03 277 aa12.7□□□□□ -0.38
SATB1-201ENST00000338745 COL4A3Q01955 1670 aa12.7□□□□□ -0.38
SATB1-201ENST00000338745 B9D2Q9BPU9 175 aa12.7□□□□□ -0.38
SATB1-201ENST00000338745 Q6ZSR3 168 aa12.69□□□□□ -0.38
SATB1-201ENST00000338745 CACNA1EQ15878 2313 aa12.69□□□□□ -0.38
SATB1-201ENST00000338745 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
SATB1-201ENST00000338745 BPY2O14599 106 aa12.68□□□□□ -0.38
SATB1-201ENST00000338745 GPHB5Q86YW7 130 aa12.68□□□□□ -0.38
SATB1-201ENST00000338745 K7EMT4 169 aa12.68□□□□□ -0.38
SATB1-201ENST00000338745 LINC00467Q9BRT7 94 aa12.68□□□□□ -0.38
SATB1-201ENST00000338745 COL6A6A6NMZ7 2263 aa12.68□□□□□ -0.38
SATB1-201ENST00000338745 C11orf1Q9H5F2 150 aa12.68□□□□□ -0.38
SATB1-201ENST00000338745 USF3Q68DE3 2245 aa12.67□□□□□ -0.38
SATB1-201ENST00000338745 ADORA2A-AS1P86434 159 aa12.67□□□□□ -0.38
SATB1-201ENST00000338745 C3orf22Q8N5N4 141 aa12.67□□□□□ -0.38
SATB1-201ENST00000338745 ZFAND2AQ8N6M9 145 aa12.67□□□□□ -0.38
SATB1-201ENST00000338745 SPANXB1Q9NS25 103 aaPredicted RBP12.67□□□□□ -0.38
SATB1-201ENST00000338745 IGKV1D-37A0A075B6S9 117 aa12.67□□□□□ -0.38
SATB1-201ENST00000338745 MAP6D1Q9H9H5 199 aa12.67□□□□□ -0.38
SATB1-201ENST00000338745 C20orf203Q8NBC4 194 aa12.67□□□□□ -0.38
SATB1-201ENST00000338745 FAM236DA0A1B0GTK5 79 aa12.66□□□□□ -0.38
SATB1-201ENST00000338745 A0A1B0GXF2 115 aa12.66□□□□□ -0.38
SATB1-201ENST00000338745 FAM236CP0DP71 79 aa12.66□□□□□ -0.38
SATB1-201ENST00000338745 WFDC10BQ8IUB3 73 aa12.66□□□□□ -0.38
SATB1-201ENST00000338745 HIST2H2BDQ6DRA6 164 aa12.66□□□□□ -0.38
SATB1-201ENST00000338745 C10orf105Q8TEF2 133 aa12.66□□□□□ -0.38
SATB1-201ENST00000338745 A0A0J9YWU9 116 aa12.65□□□□□ -0.38
SATB1-201ENST00000338745 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
SATB1-201ENST00000338745 MED12LQ86YW9 2145 aa12.65□□□□□ -0.38
SATB1-201ENST00000338745 C20orf197Q8N268 126 aa12.65□□□□□ -0.38
SATB1-201ENST00000338745 IGLV2-8P01709 118 aa12.65□□□□□ -0.38
SATB1-201ENST00000338745 A0A0J9YX75 114 aa12.65□□□□□ -0.39
SATB1-201ENST00000338745 TMEM223A0PJW6 202 aa12.65□□□□□ -0.39
SATB1-201ENST00000338745 IGKV2-24A0A0C4DH68 120 aa12.64□□□□□ -0.39
SATB1-201ENST00000338745 CASC2Q6XLA1 102 aa12.64□□□□□ -0.39
SATB1-201ENST00000338745 NEXN-AS1Q8NBZ9 246 aa12.64□□□□□ -0.39
SATB1-201ENST00000338745 TRIOBPQ9H2D6 2365 aa12.63□□□□□ -0.39
SATB1-201ENST00000338745 IGFL2Q6UWQ7 119 aa12.63□□□□□ -0.39
SATB1-201ENST00000338745 UQCRQO14949 82 aa12.63□□□□□ -0.39
SATB1-201ENST00000338745 PKDREJQ9NTG1 2253 aa12.63□□□□□ -0.39
SATB1-201ENST00000338745 NDUFC2-KCTD14E9PQ53 114 aa12.63□□□□□ -0.39
SATB1-201ENST00000338745 CCDC140Q96MF4 163 aa12.62□□□□□ -0.39
SATB1-201ENST00000338745 REG3AQ06141 175 aa12.62□□□□□ -0.39
SATB1-201ENST00000338745 MAPKAPK5-AS1Q8N8E1 139 aa12.62□□□□□ -0.39
SATB1-201ENST00000338745 PDE6GP18545 87 aa12.61□□□□□ -0.39
SATB1-201ENST00000338745 TRIAP1O43715 76 aa12.61□□□□□ -0.39
SATB1-201ENST00000338745 DCANP1Q8TF63 244 aa12.61□□□□□ -0.39
SATB1-201ENST00000338745 A0A096LNI7 61 aa12.61□□□□□ -0.39
SATB1-201ENST00000338745 SNURFQ9Y675 71 aa12.6□□□□□ -0.39
SATB1-201ENST00000338745 LINC01548A6NM66 108 aa12.6□□□□□ -0.39
SATB1-201ENST00000338745 IGLV1-47P01700 117 aa12.6□□□□□ -0.39
SATB1-201ENST00000338745 Q6ZTI0 123 aa12.6□□□□□ -0.39
SATB1-201ENST00000338745 FREM1Q5H8C1 2179 aa12.59□□□□□ -0.39
SATB1-201ENST00000338745 PRO0255Q9UI72 69 aa12.59□□□□□ -0.39
SATB1-201ENST00000338745 CPAMD8Q8IZJ3 1885 aa12.59□□□□□ -0.39
SATB1-201ENST00000338745 RAI1Q7Z5J4 1906 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms