RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 ADARB2-AS1A8MUL3 147 aa8.89□□□□□ -0.99
RBM39-202ENST00000338163 TRBV12-3P01733 135 aa8.89□□□□□ -0.99
RBM39-202ENST00000338163 SAA4P35542 130 aa8.89□□□□□ -0.99
RBM39-202ENST00000338163 SUMO4Q6EEV6 95 aa8.89□□□□□ -0.99
RBM39-202ENST00000338163 SBSPONQ8IVN8 264 aa8.89□□□□□ -0.99
RBM39-202ENST00000338163 EBI3Q14213 229 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 MINOS1Q5TGZ0 78 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 C11orf71Q6IPW1 123 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 MINOS1-NBL1R4GNA1 71 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 MUC4Q99102 2169 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 CENPVL3A0A0U1RRI6 287 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 IGHV3-11P01762 117 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 IGHV3-33P01772 117 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 PRSS2P07478 247 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 NDUFV3P56181 108 aaKnown RBP8.88□□□□□ -0.99
RBM39-202ENST00000338163 MUSTN1Q8IVN3 82 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 LENEPQ9Y5L5 61 aa8.88□□□□□ -0.99
RBM39-202ENST00000338163 VPS13CQ709C8 3753 aa8.87□□□□□ -0.99
RBM39-202ENST00000338163 IGHV1-69DA0A0B4J2H0 117 aa8.87□□□□□ -0.99
RBM39-202ENST00000338163 OOSP1A8MZH6 123 aa8.87□□□□□ -0.99
RBM39-202ENST00000338163 VCYO14598 125 aa8.87□□□□□ -0.99
RBM39-202ENST00000338163 NHLRC4P0CG21 123 aaPredicted RBP8.87□□□□□ -0.99
RBM39-202ENST00000338163 Q8N1Y9 231 aa8.87□□□□□ -0.99
RBM39-202ENST00000338163 CCL19Q99731 98 aa8.87□□□□□ -0.99
RBM39-202ENST00000338163 CITED1Q99966 193 aa8.87□□□□□ -0.99
RBM39-202ENST00000338163 ANKRD17O75179 2603 aaKnown RBP8.87□□□□□ -0.99
RBM39-202ENST00000338163 IGHV3OR16-10A0A075B7F0 116 aa8.87□□□□□ -0.99
RBM39-202ENST00000338163 FAM159AQ6UWV7 190 aa8.87□□□□□ -0.99
RBM39-202ENST00000338163 ZNF580Q9UK33 172 aa8.87□□□□□ -0.99
RBM39-202ENST00000338163 CCDC179H3BU77 68 aa8.86□□□□□ -0.99
RBM39-202ENST00000338163 OVOL1O14753 267 aa8.86□□□□□ -0.99
RBM39-202ENST00000338163 EIF4EBP3O60516 100 aaPredicted RBP8.86□□□□□ -0.99
RBM39-202ENST00000338163 KRTAP10-9P60411 292 aa8.86□□□□□ -0.99
RBM39-202ENST00000338163 ZNF56Q15929 161 aa8.86□□□□□ -0.99
RBM39-202ENST00000338163 TMEM141Q96I45 108 aa8.86□□□□□ -0.99
RBM39-202ENST00000338163 RHODO00212 210 aa8.86□□□□□ -0.99
RBM39-202ENST00000338163 ZNF876PQ49A33 203 aa8.86□□□□□ -0.99
RBM39-202ENST00000338163 AMELXQ99217 191 aa8.86□□□□□ -0.99
RBM39-202ENST00000338163 U3KQE9 123 aa8.86□□□□□ -0.99
RBM39-202ENST00000338163 IGKV3-20P01619 116 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 NPC2P61916 151 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 SHISA2Q6UWI4 295 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 TRAV8-4A0A0B4J246 113 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 TRAV12-3A0A0B4J271 114 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 GAGE12JA6NER3 117 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 GAGE7O76087 117 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 GAGE12FP0CL80 117 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 GAGE12GP0CL81 117 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 GAGE12IP0CL82 117 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 IFITM1P13164 125 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 POLR2KP53803 58 aaKnown RBP8.85□□□□□ -0.99
RBM39-202ENST00000338163 GAGE4Q13068 117 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 ATXN8Q156A1 80 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 TMEM263Q8WUH6 116 aaKnown RBP8.85□□□□□ -0.99
RBM39-202ENST00000338163 TIMM17AQ99595 171 aa8.85□□□□□ -0.99
RBM39-202ENST00000338163 TRAV41A0A0B4J266 112 aa8.84□□□□□ -0.99
RBM39-202ENST00000338163 LINC00315P59091 139 aa8.84□□□□□ -0.99
RBM39-202ENST00000338163 C15orf53Q8NAA6 179 aa8.84□□□□□ -0.99
RBM39-202ENST00000338163 SORL1Q92673 2214 aa8.84□□□□□ -0.99
RBM39-202ENST00000338163 A0A0J9YXV3 536 aa8.84□□□□□ -1
RBM39-202ENST00000338163 SPXQ9BT56 116 aa8.84□□□□□ -1
RBM39-202ENST00000338163 KIF25-AS1Q9Y6Z4 181 aa8.83□□□□□ -1
RBM39-202ENST00000338163 TRIAP1O43715 76 aa8.83□□□□□ -1
RBM39-202ENST00000338163 SMIM20Q8N5G0 67 aa8.83□□□□□ -1
RBM39-202ENST00000338163 SIRPDQ9H106 197 aa8.83□□□□□ -1
RBM39-202ENST00000338163 IGHV4OR15-8A0A075B7B6 117 aa8.82□□□□□ -1
RBM39-202ENST00000338163 A0A087WW49 117 aa8.82□□□□□ -1
RBM39-202ENST00000338163 H3BMM0 161 aa8.82□□□□□ -1
RBM39-202ENST00000338163 ATP5J2P56134 94 aa8.82□□□□□ -1
RBM39-202ENST00000338163 C2orf82Q6UX34 121 aa8.82□□□□□ -1
RBM39-202ENST00000338163 UBE2WQ96B02 151 aa8.82□□□□□ -1
RBM39-202ENST00000338163 TMEM223A0PJW6 202 aa8.82□□□□□ -1
RBM39-202ENST00000338163 LEPROTO15243 131 aa8.82□□□□□ -1
RBM39-202ENST00000338163 MED14OSP0DP75 135 aa8.82□□□□□ -1
RBM39-202ENST00000338163 UBE2E1P51965 193 aa8.82□□□□□ -1
RBM39-202ENST00000338163 TRAV12-2A0A075B6T6 113 aa8.81□□□□□ -1
RBM39-202ENST00000338163 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.81□□□□□ -1
RBM39-202ENST00000338163 A0A0B4J2C4 111 aa8.81□□□□□ -1
RBM39-202ENST00000338163 RNASE13Q5GAN3 156 aaKnown RBP8.81□□□□□ -1
RBM39-202ENST00000338163 Q6ZSV7 163 aa8.81□□□□□ -1
RBM39-202ENST00000338163 C5orf56Q8N8D9 126 aa8.81□□□□□ -1
RBM39-202ENST00000338163 RHPN1-AS1Q9BWJ2 59 aa8.81□□□□□ -1
RBM39-202ENST00000338163 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.81□□□□□ -12e-9■■■□□ 15
RBM39-202ENST00000338163 SOCS3O14543 225 aa8.81□□□□□ -1
RBM39-202ENST00000338163 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
RBM39-202ENST00000338163 C3orf56Q8N813 242 aa8.81□□□□□ -1
RBM39-202ENST00000338163 TRBV27A0A0K0K1C4 114 aa8.8□□□□□ -1
RBM39-202ENST00000338163 ODF3Q96PU9 254 aa8.8□□□□□ -1
RBM39-202ENST00000338163 TRAV8-3A0A0A6YYJ7 113 aa8.8□□□□□ -1
RBM39-202ENST00000338163 M0R2P5 195 aa8.8□□□□□ -1
RBM39-202ENST00000338163 P0DMU3 169 aa8.8□□□□□ -1
RBM39-202ENST00000338163 FAM231AP0DMU4 169 aa8.8□□□□□ -1
RBM39-202ENST00000338163 FAM231CP0DMU5 169 aa8.8□□□□□ -1
RBM39-202ENST00000338163 EDN2P20800 178 aa8.8□□□□□ -1
RBM39-202ENST00000338163 MDFICQ9P1T7 246 aa8.8□□□□□ -1
RBM39-202ENST00000338163 A0A0J9YXY3 114 aa8.79□□□□□ -1
RBM39-202ENST00000338163 CLEC2BQ92478 149 aa8.79□□□□□ -1
RBM39-202ENST00000338163 BAHCC1Q9P281 2608 aa8.79□□□□□ -1
RBM39-202ENST00000338163 TRBV10-2A0A0K0K1G8 114 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms