RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 TRGC1P0CF51 173 aa12.49□□□□□ -0.41
HLA-F-217ENST00000334668 NEXN-AS1Q8NBZ9 246 aa12.49□□□□□ -0.41
HLA-F-217ENST00000334668 PKD1P98161 4303 aa12.49□□□□□ -0.41
HLA-F-217ENST00000334668 BIRC6Q9NR09 4857 aa12.48□□□□□ -0.41
HLA-F-217ENST00000334668 FAM231BA6NCW3 169 aa12.48□□□□□ -0.41
HLA-F-217ENST00000334668 EVI2AP22794 236 aa12.48□□□□□ -0.41
HLA-F-217ENST00000334668 UBE2D3P61077 147 aa12.48□□□□□ -0.41
HLA-F-217ENST00000334668 UBE2D2P62837 147 aa12.48□□□□□ -0.41
HLA-F-217ENST00000334668 RPL36AP83881 106 aaKnown RBP12.48□□□□□ -0.41
HLA-F-217ENST00000334668 TSKUQ8WUA8 353 aa12.48□□□□□ -0.41
HLA-F-217ENST00000334668 RPL36ALQ969Q0 106 aaKnown RBP12.48□□□□□ -0.41
HLA-F-217ENST00000334668 GFRA4Q9GZZ7 299 aa12.48□□□□□ -0.41
HLA-F-217ENST00000334668 V9GYV3 84 aa12.48□□□□□ -0.41
HLA-F-217ENST00000334668 PKHD1P08F94 4074 aa12.47□□□□□ -0.41
HLA-F-217ENST00000334668 A0A087WWC5 75 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 TRAV8-6A0A0B4J262 113 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 IGHV3-38A0A0C4DH36 116 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 A0A1B0GVY2 172 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 PRSS29PA6NIE9 313 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 F5H697 171 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 M0QY20 66 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 LINC01556Q5JQF7 62 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 C15orf54Q8N8G6 183 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 KRTAP9-2Q9BYQ4 174 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 DPH3P1Q9H4G8 78 aa12.46□□□□□ -0.41
HLA-F-217ENST00000334668 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.45□□□□□ -0.42
HLA-F-217ENST00000334668 TWIST1Q15672 202 aa12.45□□□□□ -0.42
HLA-F-217ENST00000334668 ADIRFQ15847 76 aa12.45□□□□□ -0.42
HLA-F-217ENST00000334668 OR10J3Q5JRS4 329 aa12.45□□□□□ -0.42
HLA-F-217ENST00000334668 PGLYRP4Q96LB8 373 aa12.45□□□□□ -0.42
HLA-F-217ENST00000334668 DNAH11Q96DT5 4516 aa12.44□□□□□ -0.42
HLA-F-217ENST00000334668 TRAV9-2A0A087WT02 112 aa12.44□□□□□ -0.42
HLA-F-217ENST00000334668 HIGD1CA8MV81 97 aa12.44□□□□□ -0.42
HLA-F-217ENST00000334668 SUMO4Q6EEV6 95 aa12.44□□□□□ -0.42
HLA-F-217ENST00000334668 MGPP08493 103 aa12.43□□□□□ -0.42
HLA-F-217ENST00000334668 Q6ZRN7 208 aaPredicted RBP12.43□□□□□ -0.42
HLA-F-217ENST00000334668 C10orf126Q8N4M7 172 aa12.43□□□□□ -0.42
HLA-F-217ENST00000334668 H7C1H1 209 aa12.42□□□□□ -0.42
HLA-F-217ENST00000334668 DNAJC30Q96LL9 226 aa12.42□□□□□ -0.42
HLA-F-217ENST00000334668 A0A1B0GUT8 65 aa12.41□□□□□ -0.42
HLA-F-217ENST00000334668 KRTAP9-6A0A140TA67 174 aa12.4□□□□□ -0.42
HLA-F-217ENST00000334668 RASL11AQ6T310 242 aa12.4□□□□□ -0.42
HLA-F-217ENST00000334668 DAZ4Q86SG3 579 aaKnown RBP12.4□□□□□ -0.42
HLA-F-217ENST00000334668 NUP35Q8NFH5 326 aa12.4□□□□□ -0.42
HLA-F-217ENST00000334668 DAZ3Q9NR90 486 aaKnown RBP12.4□□□□□ -0.42
HLA-F-217ENST00000334668 SMIM27A0A1W2PRY6 76 aa12.39□□□□□ -0.43
HLA-F-217ENST00000334668 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
HLA-F-217ENST00000334668 TNFRSF18Q9Y5U5 241 aa12.39□□□□□ -0.43
HLA-F-217ENST00000334668 TRBV6-8A0A0A6YYG3 113 aa12.38□□□□□ -0.43
HLA-F-217ENST00000334668 IBA57-AS1B1ANH7 110 aa12.38□□□□□ -0.43
HLA-F-217ENST00000334668 SMIM15Q7Z3B0 74 aa12.38□□□□□ -0.43
HLA-F-217ENST00000334668 NFE4Q86UQ8 179 aa12.38□□□□□ -0.43
HLA-F-217ENST00000334668 NIT1Q86X76 327 aa12.38□□□□□ -0.43
HLA-F-217ENST00000334668 GATD1Q8NB37 220 aa12.38□□□□□ -0.43
HLA-F-217ENST00000334668 FRZBQ92765 325 aa12.38□□□□□ -0.43
HLA-F-217ENST00000334668 NIT2Q9NQR4 276 aa12.38□□□□□ -0.43
HLA-F-217ENST00000334668 NAT8BQ9UHF3 227 aa12.38□□□□□ -0.43
HLA-F-217ENST00000334668 TMEM97Q5BJF2 176 aa12.37□□□□□ -0.43
HLA-F-217ENST00000334668 UQCC3Q6UW78 93 aa12.37□□□□□ -0.43
HLA-F-217ENST00000334668 TMEM191AQ9H0A3 160 aa12.37□□□□□ -0.43
HLA-F-217ENST00000334668 IGHV3-30P01768 117 aa12.36□□□□□ -0.43
HLA-F-217ENST00000334668 IGHV3-33P01772 117 aa12.36□□□□□ -0.43
HLA-F-217ENST00000334668 IGHV3-30-3P0DP02 117 aa12.36□□□□□ -0.43
HLA-F-217ENST00000334668 IGHV3-30-5P0DP03 117 aa12.36□□□□□ -0.43
HLA-F-217ENST00000334668 PNRC1Q12796 327 aaPredicted RBP12.36□□□□□ -0.43
HLA-F-217ENST00000334668 NTM-AS1Q6ZSK4 140 aa12.36□□□□□ -0.43
HLA-F-217ENST00000334668 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.36□□□□□ -0.43
HLA-F-217ENST00000334668 CHCHD7Q9BUK0 85 aa12.36□□□□□ -0.43
HLA-F-217ENST00000334668 DYNC1H1Q14204 4646 aaKnown RBP12.35□□□□□ -0.43
HLA-F-217ENST00000334668 RIGQ13278 110 aa12.35□□□□□ -0.43
HLA-F-217ENST00000334668 LAGE3Q14657 143 aa12.35□□□□□ -0.43
HLA-F-217ENST00000334668 TRAV26-2A0A0B4J265 109 aa12.34□□□□□ -0.43
HLA-F-217ENST00000334668 RNF185Q96GF1 192 aa12.34□□□□□ -0.43
HLA-F-217ENST00000334668 IQCJQ1A5X6 159 aa12.33□□□□□ -0.44
HLA-F-217ENST00000334668 TMEM218A2RU14 115 aa12.32□□□□□ -0.44
HLA-F-217ENST00000334668 PPP1R2P9O14990 202 aa12.32□□□□□ -0.44
HLA-F-217ENST00000334668 A0A1B0GW15 77 aa12.31□□□□□ -0.44
HLA-F-217ENST00000334668 ADCYAP1P18509 176 aa12.31□□□□□ -0.44
HLA-F-217ENST00000334668 RAB4AP20338 218 aa12.31□□□□□ -0.44
HLA-F-217ENST00000334668 RPL39LQ96EH5 51 aaKnown RBP12.31□□□□□ -0.44
HLA-F-217ENST00000334668 TRBV25-1A0A075B6N4 114 aa12.3□□□□□ -0.44
HLA-F-217ENST00000334668 TRBV6-5A0A0K0K1A5 114 aa12.3□□□□□ -0.44
HLA-F-217ENST00000334668 LINC00862A6NCI5 91 aa12.3□□□□□ -0.44
HLA-F-217ENST00000334668 PKIAP61925 76 aa12.3□□□□□ -0.44
HLA-F-217ENST00000334668 KCNIP4Q6PIL6 250 aa12.3□□□□□ -0.44
HLA-F-217ENST00000334668 AMN1Q8IY45 258 aa12.3□□□□□ -0.44
HLA-F-217ENST00000334668 URGCP-MRPS24S4R325 110 aa12.3□□□□□ -0.44
HLA-F-217ENST00000334668 A0A087WX48 190 aa12.29□□□□□ -0.44
HLA-F-217ENST00000334668 IGHV1-24A0A0C4DH33 117 aa12.29□□□□□ -0.44
HLA-F-217ENST00000334668 A0A1B0GXF2 115 aa12.29□□□□□ -0.44
HLA-F-217ENST00000334668 GAS8-AS1O95177 125 aa12.29□□□□□ -0.44
HLA-F-217ENST00000334668 ANAPC16Q96DE5 110 aa12.29□□□□□ -0.44
HLA-F-217ENST00000334668 MRAP2Q96G30 205 aa12.29□□□□□ -0.44
HLA-F-217ENST00000334668 TRAV8-3A0A0A6YYJ7 113 aa12.28□□□□□ -0.44
HLA-F-217ENST00000334668 MT-ND4LP03901 98 aa12.28□□□□□ -0.44
HLA-F-217ENST00000334668 COMMD7Q86VX2 200 aa12.28□□□□□ -0.44
HLA-F-217ENST00000334668 CHCHD5Q9BSY4 110 aa12.28□□□□□ -0.44
HLA-F-217ENST00000334668 DNAH5Q8TE73 4624 aa12.28□□□□□ -0.44
HLA-F-217ENST00000334668 TMEM262E9PQX1 116 aa12.27□□□□□ -0.45
HLA-F-217ENST00000334668 ELOBQ15370 118 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms