RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 IGHV1-69P01742 117 aa12.16□□□□□ -0.46
UPK3B-202ENST00000334348 JPT2Q9H910 190 aa12.16□□□□□ -0.46
UPK3B-202ENST00000334348 CSMD2Q7Z408 3487 aa12.16□□□□□ -0.46
UPK3B-202ENST00000334348 TRAV8-4A0A0B4J246 113 aa12.15□□□□□ -0.46
UPK3B-202ENST00000334348 TRBV10-2A0A0K0K1G8 114 aa12.15□□□□□ -0.46
UPK3B-202ENST00000334348 ELANEP08246 267 aa12.15□□□□□ -0.46
UPK3B-202ENST00000334348 UBE2E1P51965 193 aa12.15□□□□□ -0.46
UPK3B-202ENST00000334348 ODF3Q96PU9 254 aa12.15□□□□□ -0.46
UPK3B-202ENST00000334348 A0A0J9YX75 114 aa12.15□□□□□ -0.46
UPK3B-202ENST00000334348 FAM223BA6NKX1 122 aa12.15□□□□□ -0.46
UPK3B-202ENST00000334348 F6UB75 175 aa12.15□□□□□ -0.46
UPK3B-202ENST00000334348 UNQ9165/PRO28630Q6UXU0 137 aa12.15□□□□□ -0.46
UPK3B-202ENST00000334348 FAM223AQ8IWN6 122 aa12.15□□□□□ -0.46
UPK3B-202ENST00000334348 TRBV30A0A0K0K1B3 111 aa12.14□□□□□ -0.47
UPK3B-202ENST00000334348 F5H697 171 aa12.14□□□□□ -0.47
UPK3B-202ENST00000334348 M0R2P5 195 aa12.14□□□□□ -0.47
UPK3B-202ENST00000334348 LGALS9O00182 355 aa12.14□□□□□ -0.47
UPK3B-202ENST00000334348 Q1RN00 199 aa12.14□□□□□ -0.47
UPK3B-202ENST00000334348 A0A087WWL8 130 aa12.14□□□□□ -0.47
UPK3B-202ENST00000334348 TEX49A0A1B0GTD5 131 aa12.14□□□□□ -0.47
UPK3B-202ENST00000334348 CCDC179H3BU77 68 aa12.14□□□□□ -0.47
UPK3B-202ENST00000334348 GRNP28799 593 aaKnown RBP12.14□□□□□ -0.47
UPK3B-202ENST00000334348 CELSR2Q9HCU4 2923 aa12.14□□□□□ -0.47
UPK3B-202ENST00000334348 NDUFA4O00483 81 aa12.13□□□□□ -0.47
UPK3B-202ENST00000334348 IGHV4-39P01824 125 aa12.13□□□□□ -0.47
UPK3B-202ENST00000334348 ZNF22P17026 224 aaPredicted RBP12.13□□□□□ -0.47
UPK3B-202ENST00000334348 C5orf56Q8N8D9 126 aa12.13□□□□□ -0.47
UPK3B-202ENST00000334348 RHOHQ15669 191 aa12.13□□□□□ -0.47
UPK3B-202ENST00000334348 NSUN5P1Q3KNT7 163 aa12.13□□□□□ -0.47
UPK3B-202ENST00000334348 KLLNB2CW77 178 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 SAA4P35542 130 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 CDSNQ15517 529 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 C11orf71Q6IPW1 123 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 FAM159AQ6UWV7 190 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 C15orf53Q8NAA6 179 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 OPRPNQ99935 248 aaPredicted RBP12.12□□□□□ -0.47
UPK3B-202ENST00000334348 TRAV41A0A0B4J266 112 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 H3BMM0 161 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 FBXL19-AS1Q494R0 122 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 C19orf54Q5BKX5 351 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 UBE2WQ96B02 151 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 SPANXA1Q9NS26 97 aa12.12□□□□□ -0.47
UPK3B-202ENST00000334348 MUC4Q99102 2169 aa12.11□□□□□ -0.47
UPK3B-202ENST00000334348 TRIAP1O43715 76 aa12.11□□□□□ -0.47
UPK3B-202ENST00000334348 MDFICQ9P1T7 246 aa12.11□□□□□ -0.47
UPK3B-202ENST00000334348 ZNF256Q9Y2P7 627 aaPredicted RBP12.11□□□□□ -0.47
UPK3B-202ENST00000334348 A0A0J9YXY3 114 aa12.1□□□□□ -0.47
UPK3B-202ENST00000334348 CCL21O00585 134 aa12.1□□□□□ -0.47
UPK3B-202ENST00000334348 TRBV12-3P01733 135 aa12.1□□□□□ -0.47
UPK3B-202ENST00000334348 RPL11P62913 178 aaKnown RBP12.1□□□□□ -0.47
UPK3B-202ENST00000334348 MRPL23Q16540 153 aaKnown RBP12.1□□□□□ -0.47
UPK3B-202ENST00000334348 VPS13CQ709C8 3753 aa12.1□□□□□ -0.47
UPK3B-202ENST00000334348 IGHV3-64A0A075B6Q5 118 aa12.1□□□□□ -0.47
UPK3B-202ENST00000334348 BEX4Q9NWD9 120 aaPredicted RBP12.1□□□□□ -0.47
UPK3B-202ENST00000334348 DOPEY1Q5JWR5 2465 aa12.09□□□□□ -0.47
UPK3B-202ENST00000334348 USP9YO00507 2555 aaPredicted RBP12.09□□□□□ -0.47
UPK3B-202ENST00000334348 ABCA4P78363 2273 aa12.09□□□□□ -0.47
UPK3B-202ENST00000334348 M0QY20 66 aa12.08□□□□□ -0.47
UPK3B-202ENST00000334348 C2orf82Q6UX34 121 aa12.08□□□□□ -0.47
UPK3B-202ENST00000334348 HRNRQ86YZ3 2850 aaPredicted RBP12.08□□□□□ -0.48
UPK3B-202ENST00000334348 A0A0J9YXV3 536 aa12.08□□□□□ -0.48
UPK3B-202ENST00000334348 C20orf203Q8NBC4 194 aa12.08□□□□□ -0.48
UPK3B-202ENST00000334348 FAM110AQ9BQ89 295 aa12.08□□□□□ -0.48
UPK3B-202ENST00000334348 LINC00527Q9UJ94 153 aa12.08□□□□□ -0.48
UPK3B-202ENST00000334348 LITAFQ99732 161 aa12.07□□□□□ -0.48
UPK3B-202ENST00000334348 H3BT86 120 aa12.07□□□□□ -0.48
UPK3B-202ENST00000334348 H7C423 109 aa12.07□□□□□ -0.48
UPK3B-202ENST00000334348 ADORA2A-AS1P86434 159 aa12.07□□□□□ -0.48
UPK3B-202ENST00000334348 FAM74A4Q5TZK3 123 aa12.07□□□□□ -0.48
UPK3B-202ENST00000334348 C9orf85Q96MD7 179 aa12.06□□□□□ -0.48
UPK3B-202ENST00000334348 ICOSQ9Y6W8 199 aa12.06□□□□□ -0.48
UPK3B-202ENST00000334348 MAP1AP78559 2803 aaPredicted RBP12.06□□□□□ -0.48
UPK3B-202ENST00000334348 IGKV3-7A0A075B6H7 116 aa12.06□□□□□ -0.48
UPK3B-202ENST00000334348 IGLV4-3A0A075B6K6 122 aa12.06□□□□□ -0.48
UPK3B-202ENST00000334348 ZNF580Q9UK33 172 aa12.06□□□□□ -0.48
UPK3B-202ENST00000334348 MOB4Q9Y3A3 225 aa12.06□□□□□ -0.48
UPK3B-202ENST00000334348 NPFFO15130 113 aa12.05□□□□□ -0.48
UPK3B-202ENST00000334348 IGHV3-30-3P0DP02 117 aa12.05□□□□□ -0.48
UPK3B-202ENST00000334348 ZNF56Q15929 161 aa12.05□□□□□ -0.48
UPK3B-202ENST00000334348 TMEM219Q86XT9 240 aa12.05□□□□□ -0.48
UPK3B-202ENST00000334348 RHPN1-AS1Q9BWJ2 59 aa12.05□□□□□ -0.48
UPK3B-202ENST00000334348 FAM240AA0A1B0GVK7 77 aa12.05□□□□□ -0.48
UPK3B-202ENST00000334348 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
UPK3B-202ENST00000334348 IGHV3-16A0A0C4DH30 117 aa12.04□□□□□ -0.48
UPK3B-202ENST00000334348 COX6CP09669 75 aa12.04□□□□□ -0.48
UPK3B-202ENST00000334348 DEFB121Q5J5C9 76 aa12.04□□□□□ -0.48
UPK3B-202ENST00000334348 SPANXDQ9BXN6 97 aa12.04□□□□□ -0.48
UPK3B-202ENST00000334348 SPANXCQ9NY87 97 aa12.04□□□□□ -0.48
UPK3B-202ENST00000334348 ASH1LQ9NR48 2969 aaKnown RBP12.04□□□□□ -0.48
UPK3B-202ENST00000334348 I3L3M4 83 aa12.04□□□□□ -0.48
UPK3B-202ENST00000334348 TIMM21Q9BVV7 248 aa12.04□□□□□ -0.48
UPK3B-202ENST00000334348 USMG5Q96IX5 58 aa12.03□□□□□ -0.48
UPK3B-202ENST00000334348 PRSS2P07478 247 aa12.03□□□□□ -0.48
UPK3B-202ENST00000334348 SMIM20Q8N5G0 67 aa12.03□□□□□ -0.48
UPK3B-202ENST00000334348 SPXQ9BT56 116 aa12.03□□□□□ -0.48
UPK3B-202ENST00000334348 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
UPK3B-202ENST00000334348 ADARB2-AS1A8MUL3 147 aa12.02□□□□□ -0.49
UPK3B-202ENST00000334348 HECTD1Q9ULT8 2610 aa12.02□□□□□ -0.49
UPK3B-202ENST00000334348 PLA2G2AP14555 144 aa12.01□□□□□ -0.49
UPK3B-202ENST00000334348 ADAMTSL4-AS1Q5T5F5 129 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms