RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 SMIM15Q7Z3B0 74 aa14.31□□□□□ -0.12
YBX1-202ENST00000332220 MT-ND4LP03901 98 aa14.3□□□□□ -0.12
YBX1-202ENST00000332220 RIGQ13278 110 aa14.3□□□□□ -0.12
YBX1-202ENST00000332220 KRTAP1-5Q9BYS1 174 aa14.3□□□□□ -0.12
YBX1-202ENST00000332220 TRAV26-2A0A0B4J265 109 aa14.29□□□□□ -0.12
YBX1-202ENST00000332220 LELP1Q5T871 98 aa14.29□□□□□ -0.12
YBX1-202ENST00000332220 ANAPC16Q96DE5 110 aa14.29□□□□□ -0.12
YBX1-202ENST00000332220 H7C1H1 209 aa14.28□□□□□ -0.12
YBX1-202ENST00000332220 C10orf91Q5T1B1 145 aa14.28□□□□□ -0.12
YBX1-202ENST00000332220 RASL11AQ6T310 242 aa14.28□□□□□ -0.12
YBX1-202ENST00000332220 GATD1Q8NB37 220 aa14.28□□□□□ -0.12
YBX1-202ENST00000332220 TMEM191AQ9H0A3 160 aa14.28□□□□□ -0.12
YBX1-202ENST00000332220 IGHV3-38A0A0C4DH36 116 aa14.27□□□□□ -0.13
YBX1-202ENST00000332220 OR10J3Q5JRS4 329 aa14.27□□□□□ -0.13
YBX1-202ENST00000332220 DNAH17Q9UFH2 4485 aa14.26□□□□□ -0.13
YBX1-202ENST00000332220 MRPL54Q6P161 138 aaKnown RBP14.26□□□□□ -0.13
YBX1-202ENST00000332220 RNF185Q96GF1 192 aa14.26□□□□□ -0.13
YBX1-202ENST00000332220 DNAJC30Q96LL9 226 aa14.26□□□□□ -0.13
YBX1-202ENST00000332220 AMN1Q8IY45 258 aa14.25□□□□□ -0.13
YBX1-202ENST00000332220 NIT2Q9NQR4 276 aa14.25□□□□□ -0.13
YBX1-202ENST00000332220 CARHSP1Q9Y2V2 147 aaKnown RBP14.25□□□□□ -0.13
YBX1-202ENST00000332220 TNFRSF18Q9Y5U5 241 aa14.25□□□□□ -0.13
YBX1-202ENST00000332220 TRAV8-6A0A0B4J262 113 aa14.24□□□□□ -0.13
YBX1-202ENST00000332220 A0A1B0GXF2 115 aa14.24□□□□□ -0.13
YBX1-202ENST00000332220 DNAH10OSP0CZ25 163 aa14.24□□□□□ -0.13
YBX1-202ENST00000332220 CAMPP49913 170 aa14.24□□□□□ -0.13
YBX1-202ENST00000332220 TTC32Q5I0X7 151 aa14.24□□□□□ -0.13
YBX1-202ENST00000332220 RPL39LQ96EH5 51 aaKnown RBP14.24□□□□□ -0.13
YBX1-202ENST00000332220 A0A087WWC5 75 aa14.23□□□□□ -0.13
YBX1-202ENST00000332220 GAS8-AS1O95177 125 aa14.23□□□□□ -0.13
YBX1-202ENST00000332220 RAB4AP20338 218 aa14.23□□□□□ -0.13
YBX1-202ENST00000332220 A0A1B0GW15 77 aa14.22□□□□□ -0.13
YBX1-202ENST00000332220 RTL8CO15255 209 aa14.21□□□□□ -0.13
YBX1-202ENST00000332220 HBBP68871 147 aa14.21□□□□□ -0.13
YBX1-202ENST00000332220 NTM-AS1Q6ZSK4 140 aa14.21□□□□□ -0.13
YBX1-202ENST00000332220 DAZ4Q86SG3 579 aaKnown RBP14.21□□□□□ -0.13
YBX1-202ENST00000332220 Q8N3U1 123 aa14.21□□□□□ -0.13
YBX1-202ENST00000332220 DAZ3Q9NR90 486 aaKnown RBP14.21□□□□□ -0.13
YBX1-202ENST00000332220 FAT2Q9NYQ8 4349 aa14.2□□□□□ -0.14
YBX1-202ENST00000332220 TRBV6-8A0A0A6YYG3 113 aa14.2□□□□□ -0.14
YBX1-202ENST00000332220 LINC01556Q5JQF7 62 aa14.2□□□□□ -0.14
YBX1-202ENST00000332220 C1orf134Q5TEV5 83 aa14.2□□□□□ -0.14
YBX1-202ENST00000332220 FAM104BQ5XKR9 115 aa14.2□□□□□ -0.14
YBX1-202ENST00000332220 SMKR1H3BMG3 65 aa14.19□□□□□ -0.14
YBX1-202ENST00000332220 ATP5L2Q7Z4Y8 100 aa14.19□□□□□ -0.14
YBX1-202ENST00000332220 FRZBQ92765 325 aa14.19□□□□□ -0.14
YBX1-202ENST00000332220 CTDSP1Q9GZU7 261 aa14.19□□□□□ -0.14
YBX1-202ENST00000332220 C7orf77A4D0Y5 90 aa14.18□□□□□ -0.14
YBX1-202ENST00000332220 NCR2O95944 276 aa14.18□□□□□ -0.14
YBX1-202ENST00000332220 IGHV3-30P01768 117 aa14.18□□□□□ -0.14
YBX1-202ENST00000332220 IGHV3-33P01772 117 aa14.18□□□□□ -0.14
YBX1-202ENST00000332220 IGHV3-30-3P0DP02 117 aa14.18□□□□□ -0.14
YBX1-202ENST00000332220 IGHV3-30-5P0DP03 117 aa14.18□□□□□ -0.14
YBX1-202ENST00000332220 RPS10P46783 165 aaKnown RBP14.18□□□□□ -0.14
YBX1-202ENST00000332220 MRPL51Q4U2R6 128 aaKnown RBP14.18□□□□□ -0.14
YBX1-202ENST00000332220 C6orf223Q8N319 242 aa14.18□□□□□ -0.14
YBX1-202ENST00000332220 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.18□□□□□ -0.14
YBX1-202ENST00000332220 CLRN3Q8NCR9 226 aa14.18□□□□□ -0.14
YBX1-202ENST00000332220 DEFB104AQ8WTQ1 72 aa14.18□□□□□ -0.14
YBX1-202ENST00000332220 MRAP2Q96G30 205 aa14.18□□□□□ -0.14
YBX1-202ENST00000332220 S100A8P05109 93 aa14.17□□□□□ -0.14
YBX1-202ENST00000332220 TRBV6-5A0A0K0K1A5 114 aa14.16□□□□□ -0.14
YBX1-202ENST00000332220 APOC3P02656 99 aa14.16□□□□□ -0.14
YBX1-202ENST00000332220 NIT1Q86X76 327 aa14.16□□□□□ -0.14
YBX1-202ENST00000332220 IMMP2LQ96T52 175 aa14.16□□□□□ -0.14
YBX1-202ENST00000332220 TRAV9-2A0A087WT02 112 aa14.15□□□□□ -0.14
YBX1-202ENST00000332220 TMEM97Q5BJF2 176 aa14.15□□□□□ -0.14
YBX1-202ENST00000332220 SLC7A5P1Q8MH63 180 aa14.15□□□□□ -0.14
YBX1-202ENST00000332220 BTF3L4Q96K17 158 aa14.15□□□□□ -0.14
YBX1-202ENST00000332220 SDHAF1A6NFY7 115 aa14.14□□□□□ -0.15
YBX1-202ENST00000332220 RHEBQ15382 184 aa14.14□□□□□ -0.15
YBX1-202ENST00000332220 NRACQ8N912 160 aa14.14□□□□□ -0.15
YBX1-202ENST00000332220 K7EP13 123 aa14.13□□□□□ -0.15
YBX1-202ENST00000332220 C10orf126Q8N4M7 172 aa14.13□□□□□ -0.15
YBX1-202ENST00000332220 RPS10P5Q9NQ39 176 aa14.13□□□□□ -0.15
YBX1-202ENST00000332220 TRBV25-1A0A075B6N4 114 aa14.12□□□□□ -0.15
YBX1-202ENST00000332220 IGHV1-24A0A0C4DH33 117 aa14.12□□□□□ -0.15
YBX1-202ENST00000332220 IQCJQ1A5X6 159 aa14.12□□□□□ -0.15
YBX1-202ENST00000332220 KCNIP4Q6PIL6 250 aa14.12□□□□□ -0.15
YBX1-202ENST00000332220 CHCHD5Q9BSY4 110 aa14.12□□□□□ -0.15
YBX1-202ENST00000332220 ST20Q9HBF5 79 aa14.12□□□□□ -0.15
YBX1-202ENST00000332220 TMEM242Q9NWH2 141 aa14.12□□□□□ -0.15
YBX1-202ENST00000332220 COTL1Q14019 142 aa14.11□□□□□ -0.15
YBX1-202ENST00000332220 NDUFA5Q16718 116 aa14.11□□□□□ -0.15
YBX1-202ENST00000332220 LINC00336Q6ZUF6 198 aa14.11□□□□□ -0.15
YBX1-202ENST00000332220 TMEM70Q9BUB7 260 aa14.11□□□□□ -0.15
YBX1-202ENST00000332220 URGCP-MRPS24S4R325 110 aa14.11□□□□□ -0.15
YBX1-202ENST00000332220 IBA57-AS1B1ANH7 110 aa14.1□□□□□ -0.15
YBX1-202ENST00000332220 BTF3P20290 206 aaKnown RBP14.1□□□□□ -0.15
YBX1-202ENST00000332220 CKS2P33552 79 aa14.1□□□□□ -0.15
YBX1-202ENST00000332220 POLR2KP53803 58 aaKnown RBP14.1□□□□□ -0.15
YBX1-202ENST00000332220 Q6ZRN7 208 aaPredicted RBP14.1□□□□□ -0.15
YBX1-202ENST00000332220 TRAV9-1A0A075B6T8 112 aa14.09□□□□□ -0.15
YBX1-202ENST00000332220 PRSS29PA6NIE9 313 aa14.09□□□□□ -0.15
YBX1-202ENST00000332220 D6R8Y8 96 aa14.09□□□□□ -0.15
YBX1-202ENST00000332220 TMEM262E9PQX1 116 aa14.09□□□□□ -0.15
YBX1-202ENST00000332220 GAGE6Q13070 117 aa14.09□□□□□ -0.15
YBX1-202ENST00000332220 MPV17L2Q567V2 206 aa14.09□□□□□ -0.15
YBX1-202ENST00000332220 SVBPQ8N300 66 aa14.09□□□□□ -0.15
YBX1-202ENST00000332220 EPPK1P58107 5090 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms