RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 GATCO43716 136 aaKnown RBP18.54■□□□□ 0.56
ATPAF1-201ENST00000329231 LYZL1Q6UWQ5 148 aa18.54■□□□□ 0.56
ATPAF1-201ENST00000329231 NEXN-AS1Q8NBZ9 246 aa18.54■□□□□ 0.56
ATPAF1-201ENST00000329231 KIF25-AS1Q9Y6Z4 181 aa18.54■□□□□ 0.56
ATPAF1-201ENST00000329231 CDK2AP2O75956 126 aa18.53■□□□□ 0.56
ATPAF1-201ENST00000329231 Q8N3U1 123 aa18.53■□□□□ 0.56
ATPAF1-201ENST00000329231 URGCP-MRPS24S4R325 110 aa18.53■□□□□ 0.56
ATPAF1-201ENST00000329231 CTRLP40313 264 aa18.52■□□□□ 0.56
ATPAF1-201ENST00000329231 TMEM241Q24JQ0 296 aa18.52■□□□□ 0.56
ATPAF1-201ENST00000329231 CDPF1Q6NVV7 123 aa18.52■□□□□ 0.56
ATPAF1-201ENST00000329231 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.52■□□□□ 0.56
ATPAF1-201ENST00000329231 WDR73Q6P4I2 378 aa18.51■□□□□ 0.55
ATPAF1-201ENST00000329231 CT83Q5H943 113 aa18.5■□□□□ 0.55
ATPAF1-201ENST00000329231 DAZ4Q86SG3 579 aaKnown RBP18.5■□□□□ 0.55
ATPAF1-201ENST00000329231 NIT1Q86X76 327 aa18.5■□□□□ 0.55
ATPAF1-201ENST00000329231 DAZ3Q9NR90 486 aaKnown RBP18.5■□□□□ 0.55
ATPAF1-201ENST00000329231 TRAV8-3A0A0A6YYJ7 113 aa18.49■□□□□ 0.55
ATPAF1-201ENST00000329231 A8MWL6 223 aa18.49■□□□□ 0.55
ATPAF1-201ENST00000329231 TM2D2Q9BX73 214 aa18.49■□□□□ 0.55
ATPAF1-201ENST00000329231 TRGC1P0CF51 173 aa18.48■□□□□ 0.55
ATPAF1-201ENST00000329231 GTSF1Q8WW33 167 aa18.48■□□□□ 0.55
ATPAF1-201ENST00000329231 CNFNQ9BYD5 112 aa18.48■□□□□ 0.55
ATPAF1-201ENST00000329231 OSTCQ9NRP0 149 aa18.48■□□□□ 0.55
ATPAF1-201ENST00000329231 NAT8Q9UHE5 227 aa18.48■□□□□ 0.55
ATPAF1-201ENST00000329231 LRP1BQ9NZR2 4599 aa18.48■□□□□ 0.55
ATPAF1-201ENST00000329231 MGPP08493 103 aa18.47■□□□□ 0.55
ATPAF1-201ENST00000329231 NTF3P20783 257 aa18.47■□□□□ 0.55
ATPAF1-201ENST00000329231 KCNIP4Q6PIL6 250 aa18.47■□□□□ 0.55
ATPAF1-201ENST00000329231 CHCHD7Q9BUK0 85 aa18.47■□□□□ 0.55
ATPAF1-201ENST00000329231 A0A087WX48 190 aa18.46■□□□□ 0.55
ATPAF1-201ENST00000329231 TRBV6-8A0A0A6YYG3 113 aa18.46■□□□□ 0.55
ATPAF1-201ENST00000329231 H7C1H1 209 aa18.46■□□□□ 0.55
ATPAF1-201ENST00000329231 RPL23P62829 140 aaKnown RBP18.46■□□□□ 0.55
ATPAF1-201ENST00000329231 CLLU1Q5K131 121 aa18.46■□□□□ 0.55
ATPAF1-201ENST00000329231 IFITM2Q01629 132 aa18.45■□□□□ 0.54
ATPAF1-201ENST00000329231 C15orf54Q8N8G6 183 aa18.45■□□□□ 0.54
ATPAF1-201ENST00000329231 ISOC2Q96AB3 205 aa18.45■□□□□ 0.54
ATPAF1-201ENST00000329231 LRCOL1A6NCL2 159 aa18.44■□□□□ 0.54
ATPAF1-201ENST00000329231 FUSP35637 526 aaKnown RBP eCLIP18.44■□□□□ 0.54
ATPAF1-201ENST00000329231 TMEM97Q5BJF2 176 aa18.44■□□□□ 0.54
ATPAF1-201ENST00000329231 RYR1P21817 5038 aa18.43■□□□□ 0.54
ATPAF1-201ENST00000329231 M0QY20 66 aa18.43■□□□□ 0.54
ATPAF1-201ENST00000329231 FOXA3P55318 350 aaPredicted RBP18.43■□□□□ 0.54
ATPAF1-201ENST00000329231 ELOBQ15370 118 aa18.43■□□□□ 0.54
ATPAF1-201ENST00000329231 TWIST1Q15672 202 aa18.43■□□□□ 0.54
ATPAF1-201ENST00000329231 ADIRFQ15847 76 aa18.43■□□□□ 0.54
ATPAF1-201ENST00000329231 DNAJC30Q96LL9 226 aa18.43■□□□□ 0.54
ATPAF1-201ENST00000329231 DPH3P1Q9H4G8 78 aa18.43■□□□□ 0.54
ATPAF1-201ENST00000329231 SUMO4Q6EEV6 95 aa18.42■□□□□ 0.54
ATPAF1-201ENST00000329231 TSKUQ8WUA8 353 aa18.42■□□□□ 0.54
ATPAF1-201ENST00000329231 GFRA4Q9GZZ7 299 aa18.42■□□□□ 0.54
ATPAF1-201ENST00000329231 TMEM262E9PQX1 116 aa18.41■□□□□ 0.54
ATPAF1-201ENST00000329231 RMI2Q96E14 147 aa18.41■□□□□ 0.54
ATPAF1-201ENST00000329231 KLK12Q9UKR0 248 aa18.41■□□□□ 0.54
ATPAF1-201ENST00000329231 COX11Q9Y6N1 276 aa18.41■□□□□ 0.54
ATPAF1-201ENST00000329231 FAM231BA6NCW3 169 aa18.4■□□□□ 0.54
ATPAF1-201ENST00000329231 PGLYRP4Q96LB8 373 aa18.4■□□□□ 0.54
ATPAF1-201ENST00000329231 V9GYV3 84 aa18.4■□□□□ 0.54
ATPAF1-201ENST00000329231 PKIAP61925 76 aa18.39■□□□□ 0.53
ATPAF1-201ENST00000329231 RASL11AQ6T310 242 aa18.38■□□□□ 0.53
ATPAF1-201ENST00000329231 NTN5Q8WTR8 489 aaPredicted RBP18.38■□□□□ 0.53
ATPAF1-201ENST00000329231 CHCHD5Q9BSY4 110 aa18.38■□□□□ 0.53
ATPAF1-201ENST00000329231 DNAH5Q8TE73 4624 aa18.37■□□□□ 0.53
ATPAF1-201ENST00000329231 Q8N814 137 aa18.37■□□□□ 0.53
ATPAF1-201ENST00000329231 BORCS7Q96B45 105 aa18.37■□□□□ 0.53
ATPAF1-201ENST00000329231 HIGD1CA8MV81 97 aa18.36■□□□□ 0.53
ATPAF1-201ENST00000329231 NTM-AS1Q6ZSK4 140 aa18.36■□□□□ 0.53
ATPAF1-201ENST00000329231 UBE2WQ96B02 151 aa18.36■□□□□ 0.53
ATPAF1-201ENST00000329231 SMIM15Q7Z3B0 74 aa18.35■□□□□ 0.53
ATPAF1-201ENST00000329231 MAPKAPK5-AS1Q8N8E1 139 aa18.35■□□□□ 0.53
ATPAF1-201ENST00000329231 HSPG2P98160 4391 aa18.35■□□□□ 0.53
ATPAF1-201ENST00000329231 TRBV25-1A0A075B6N4 114 aa18.34■□□□□ 0.53
ATPAF1-201ENST00000329231 IGLV5-52A0A0A0MRZ9 124 aa18.34■□□□□ 0.53
ATPAF1-201ENST00000329231 GCSHP23434 173 aa18.34■□□□□ 0.53
ATPAF1-201ENST00000329231 Q0VG73 95 aa18.34■□□□□ 0.53
ATPAF1-201ENST00000329231 NIT2Q9NQR4 276 aa18.34■□□□□ 0.53
ATPAF1-201ENST00000329231 IGKV2D-24A0A075B6R9 120 aa18.33■□□□□ 0.52
ATPAF1-201ENST00000329231 A0A1B0GUT8 65 aa18.33■□□□□ 0.52
ATPAF1-201ENST00000329231 MPV17L2Q567V2 206 aa18.33■□□□□ 0.52
ATPAF1-201ENST00000329231 IGHV1-24A0A0C4DH33 117 aa18.31■□□□□ 0.52
ATPAF1-201ENST00000329231 KRTAP10-1P60331 282 aa18.31■□□□□ 0.52
ATPAF1-201ENST00000329231 IQCJQ1A5X6 159 aa18.31■□□□□ 0.52
ATPAF1-201ENST00000329231 CRPP02741 224 aa18.3■□□□□ 0.52
ATPAF1-201ENST00000329231 ANGP03950 147 aaKnown RBP18.3■□□□□ 0.52
ATPAF1-201ENST00000329231 ATRAIDQ6UW56 229 aa18.3■□□□□ 0.52
ATPAF1-201ENST00000329231 NUP35Q8NFH5 326 aa18.3■□□□□ 0.52
ATPAF1-201ENST00000329231 FRZBQ92765 325 aa18.3■□□□□ 0.52
ATPAF1-201ENST00000329231 NAT8BQ9UHF3 227 aa18.3■□□□□ 0.52
ATPAF1-201ENST00000329231 APOBP04114 4563 aaKnown RBP18.29■□□□□ 0.52
ATPAF1-201ENST00000329231 WFDC2Q14508 124 aa18.29■□□□□ 0.52
ATPAF1-201ENST00000329231 SMIM27A0A1W2PRY6 76 aa18.28■□□□□ 0.52
ATPAF1-201ENST00000329231 GAGE6Q13070 117 aa18.28■□□□□ 0.52
ATPAF1-201ENST00000329231 UQCC3Q6UW78 93 aa18.28■□□□□ 0.52
ATPAF1-201ENST00000329231 BAALCQ8WXS3 180 aa18.28■□□□□ 0.52
ATPAF1-201ENST00000329231 LECT2O14960 151 aa18.27■□□□□ 0.52
ATPAF1-201ENST00000329231 RIGQ13278 110 aa18.27■□□□□ 0.52
ATPAF1-201ENST00000329231 ENHOQ6UWT2 76 aa18.27■□□□□ 0.52
ATPAF1-201ENST00000329231 Q8N1X5 172 aa18.27■□□□□ 0.52
ATPAF1-201ENST00000329231 Q8N976 141 aa18.27■□□□□ 0.52
ATPAF1-201ENST00000329231 GATD1Q8NB37 220 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms