RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 ZNF469Q96JG9 3925 aaPredicted RBP12.03□□□□□ -0.48
CRAT-201ENST00000318080 TEX49A0A1B0GTD5 131 aa12.02□□□□□ -0.48
CRAT-201ENST00000318080 PLA2G2AP14555 144 aa12.02□□□□□ -0.48
CRAT-201ENST00000318080 KRTAP10-9P60411 292 aa12.02□□□□□ -0.48
CRAT-201ENST00000318080 CSDC2Q9Y534 153 aaKnown RBP12.02□□□□□ -0.48
CRAT-201ENST00000318080 LINC01619G3V211 115 aa12.02□□□□□ -0.49
CRAT-201ENST00000318080 GAGE2BQ13066 116 aa12.02□□□□□ -0.49
CRAT-201ENST00000318080 GAGE2EQ4V326 116 aa12.02□□□□□ -0.49
CRAT-201ENST00000318080 MEIG1Q5JSS6 88 aa12.02□□□□□ -0.49
CRAT-201ENST00000318080 MRPL53Q96EL3 112 aaKnown RBP12.02□□□□□ -0.49
CRAT-201ENST00000318080 DPH3P1Q9H4G8 78 aa12.02□□□□□ -0.49
CRAT-201ENST00000318080 GAGE2DQ9UEU5 116 aa12.02□□□□□ -0.49
CRAT-201ENST00000318080 TRBV7-1A0A0A6YYK4 115 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 TRAV2A0A0B4J234 112 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 ADARB2-AS1A8MUL3 147 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 UBE2E1P51965 193 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 RPL11P62913 178 aaKnown RBP12.01□□□□□ -0.49
CRAT-201ENST00000318080 TTC32Q5I0X7 151 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 ZNRF2Q8NHG8 242 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 CCDC168Q8NDH2 2452 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 RNASE3P12724 160 aaKnown RBP12.01□□□□□ -0.49
CRAT-201ENST00000318080 SRD5A1P18405 259 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 C5orf56Q8N8D9 126 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 SORL1Q92673 2214 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 IGHV3-11P01762 117 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 ASIPP42127 132 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 KLK9Q2XQG4 91 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 PRO1854Q9UHT4 67 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 KLK9Q9UKQ9 250 aa12.01□□□□□ -0.49
CRAT-201ENST00000318080 A0A087WWL8 130 aa12□□□□□ -0.49
CRAT-201ENST00000318080 EDN2P20800 178 aa12□□□□□ -0.49
CRAT-201ENST00000318080 IFITM1P13164 125 aa11.99□□□□□ -0.49
CRAT-201ENST00000318080 Q1RN00 199 aa11.99□□□□□ -0.49
CRAT-201ENST00000318080 Q6ZSV7 163 aa11.99□□□□□ -0.49
CRAT-201ENST00000318080 Q8N1Y9 231 aa11.99□□□□□ -0.49
CRAT-201ENST00000318080 ABCA2Q9BZC7 2435 aa11.99□□□□□ -0.49
CRAT-201ENST00000318080 TRAV25A0A0B4J276 109 aa11.99□□□□□ -0.49
CRAT-201ENST00000318080 TRAV21A0A0B4J279 112 aa11.99□□□□□ -0.49
CRAT-201ENST00000318080 C5orf47Q569G3 176 aa11.99□□□□□ -0.49
CRAT-201ENST00000318080 SOCS3O14543 225 aa11.98□□□□□ -0.49
CRAT-201ENST00000318080 SNCGO76070 127 aa11.98□□□□□ -0.49
CRAT-201ENST00000318080 C9orf139Q6ZV77 190 aa11.98□□□□□ -0.49
CRAT-201ENST00000318080 SBSPONQ8IVN8 264 aa11.98□□□□□ -0.49
CRAT-201ENST00000318080 OR10J6PQ8NGY7 276 aa11.98□□□□□ -0.49
CRAT-201ENST00000318080 CCL19Q99731 98 aa11.98□□□□□ -0.49
CRAT-201ENST00000318080 TRAV41A0A0B4J266 112 aa11.98□□□□□ -0.49
CRAT-201ENST00000318080 NPC2P61916 151 aa11.98□□□□□ -0.49
CRAT-201ENST00000318080 LINC00315P59091 139 aa11.97□□□□□ -0.49
CRAT-201ENST00000318080 LINC00477Q96M19 166 aa11.97□□□□□ -0.49
CRAT-201ENST00000318080 BPESC1Q9GZL8 116 aa11.97□□□□□ -0.49
CRAT-201ENST00000318080 BRD3OSQ6XYD6 125 aa11.97□□□□□ -0.49
CRAT-201ENST00000318080 NPFFO15130 113 aa11.96□□□□□ -0.49
CRAT-201ENST00000318080 MUSTN1Q8IVN3 82 aa11.96□□□□□ -0.49
CRAT-201ENST00000318080 LOC107984640A0A0U1RRK4 108 aa11.96□□□□□ -0.49
CRAT-201ENST00000318080 J3QKU1 62 aa11.96□□□□□ -0.49
CRAT-201ENST00000318080 SLC25A29Q8N8R3 303 aa11.96□□□□□ -0.49
CRAT-201ENST00000318080 AMELXQ99217 191 aa11.96□□□□□ -0.49
CRAT-201ENST00000318080 ZNF256Q9Y2P7 627 aaPredicted RBP11.96□□□□□ -0.49
CRAT-201ENST00000318080 UNC79Q9P2D8 2635 aa11.96□□□□□ -0.49
CRAT-201ENST00000318080 F5H697 171 aa11.96□□□□□ -0.5
CRAT-201ENST00000318080 LMO4P61968 165 aa11.96□□□□□ -0.5
CRAT-201ENST00000318080 J3QQQ9 107 aa11.95□□□□□ -0.5
CRAT-201ENST00000318080 ODF3Q96PU9 254 aa11.95□□□□□ -0.5
CRAT-201ENST00000318080 KIF25-AS1Q9Y6Z4 181 aa11.95□□□□□ -0.5
CRAT-201ENST00000318080 IGHV3-33P01772 117 aa11.95□□□□□ -0.5
CRAT-201ENST00000318080 C15orf53Q8NAA6 179 aa11.95□□□□□ -0.5
CRAT-201ENST00000318080 LENEPQ9Y5L5 61 aa11.95□□□□□ -0.5
CRAT-201ENST00000318080 IGIPA6NJ69 53 aa11.94□□□□□ -0.5
CRAT-201ENST00000318080 FAM74A4Q5TZK3 123 aa11.94□□□□□ -0.5
CRAT-201ENST00000318080 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
CRAT-201ENST00000318080 LY6EQ16553 131 aa11.94□□□□□ -0.5
CRAT-201ENST00000318080 C19orf54Q5BKX5 351 aa11.94□□□□□ -0.5
CRAT-201ENST00000318080 LYRM7Q5U5X0 104 aa11.94□□□□□ -0.5
CRAT-201ENST00000318080 NOTCH2Q04721 2471 aa11.94□□□□□ -0.5
CRAT-201ENST00000318080 LGALS3P17931 250 aaKnown RBP11.93□□□□□ -0.5
CRAT-201ENST00000318080 HERVK_113P61574 105 aa11.93□□□□□ -0.5
CRAT-201ENST00000318080 SUMO4Q6EEV6 95 aa11.93□□□□□ -0.5
CRAT-201ENST00000318080 OVOL1O14753 267 aa11.93□□□□□ -0.5
CRAT-201ENST00000318080 PMVKQ15126 192 aa11.93□□□□□ -0.5
CRAT-201ENST00000318080 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
CRAT-201ENST00000318080 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
CRAT-201ENST00000318080 DUX3Q96PT4 197 aa11.92□□□□□ -0.5
CRAT-201ENST00000318080 TLN2Q9Y4G6 2542 aa11.92□□□□□ -0.5
CRAT-201ENST00000318080 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.92□□□□□ -0.56e-7■■■■□ 21.3
CRAT-201ENST00000318080 LINC00694P0DN24 101 aa11.91□□□□□ -0.5
CRAT-201ENST00000318080 MRPL23Q16540 153 aaKnown RBP11.91□□□□□ -0.5
CRAT-201ENST00000318080 CHCHD5Q9BSY4 110 aa11.91□□□□□ -0.5
CRAT-201ENST00000318080 POLR2KP53803 58 aaKnown RBP11.91□□□□□ -0.5
CRAT-201ENST00000318080 LINC01620Q4KN68 170 aa11.9□□□□□ -0.5
CRAT-201ENST00000318080 RHPN1-AS1Q9BWJ2 59 aa11.9□□□□□ -0.5
CRAT-201ENST00000318080 TEX15Q9BXT5 2789 aa11.9□□□□□ -0.5
CRAT-201ENST00000318080 AKAP9Q99996 3911 aa11.9□□□□□ -0.5
CRAT-201ENST00000318080 PDZD2O15018 2839 aa11.9□□□□□ -0.5
CRAT-201ENST00000318080 CSPG4Q6UVK1 2322 aa11.9□□□□□ -0.5
CRAT-201ENST00000318080 IGHV4-30-2A0A087WSY4 118 aa11.9□□□□□ -0.5
CRAT-201ENST00000318080 TRAV8-4A0A0B4J246 113 aa11.9□□□□□ -0.5
CRAT-201ENST00000318080 A8MZ25 164 aa11.9□□□□□ -0.5
CRAT-201ENST00000318080 PRSS2P07478 247 aa11.9□□□□□ -0.5
CRAT-201ENST00000318080 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms