RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 PIK3CD-AS1Q5SR53 167 aa6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 CLUHP3Q96NS8 147 aa6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 SPANXA1Q9NS26 97 aa6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 PMVKQ15126 192 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 Q6ZS46 218 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 NIT1Q86X76 327 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 POLQO75417 2590 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 PRAC2D3DTV9 90 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 PAM16Q9Y3D7 125 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 TRAV8-2A0A0B4J237 113 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 IGHV3-38A0A0C4DH36 116 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 COX7A2LO14548 114 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 LINC00518Q8N0U6 118 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 C18orf32Q8TCD1 76 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 IGLV2-11P01706 119 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 HIST1H2BLQ99880 126 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 TP53TG1Q9Y2A0 90 aa6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 TET2Q6N021 2002 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-201ENST00000317968 ZFAND6Q6FIF0 208 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 TRBV10-1A0A0K0K1A3 114 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 A0A1B0GXF2 115 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 IGLC6P0CF74 106 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 AMTNQ6UX39 209 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 IGSF10Q6WRI0 2623 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 NDUFA1O15239 70 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 AMN1Q8IY45 258 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 PROK1P58294 105 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 LGALS9BQ3B8N2 356 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 KRTAP1-3Q8IUG1 177 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 DCANP1Q8TF63 244 aa6.41□□□□□ -1.38
PDLIM5-201ENST00000317968 CXCL5P42830 114 aa6.4□□□□□ -1.38
PDLIM5-201ENST00000317968 DEFB4AO15263 64 aa6.4□□□□□ -1.38
PDLIM5-201ENST00000317968 SNAI2O43623 268 aa6.4□□□□□ -1.38
PDLIM5-201ENST00000317968 CRYGDP07320 174 aa6.4□□□□□ -1.38
PDLIM5-201ENST00000317968 TDRG1Q3Y452 100 aa6.4□□□□□ -1.38
PDLIM5-201ENST00000317968 TRBV7-3A0A075B6L6 115 aa6.4□□□□□ -1.39
PDLIM5-201ENST00000317968 hDV102S1A0JD36 115 aa6.4□□□□□ -1.39
PDLIM5-201ENST00000317968 FAM222AQ5U5X8 452 aa6.4□□□□□ -1.39
PDLIM5-201ENST00000317968 YPEL4Q96NS1 127 aa6.4□□□□□ -1.39
PDLIM5-201ENST00000317968 KLLNB2CW77 178 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 ESDP10768 282 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 MRPL51Q4U2R6 128 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 ZFAND2AQ8N6M9 145 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 SNHG12Q9BXW3 62 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 IGHV3-64A0A075B6Q5 118 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 GAGE10A6NGK3 116 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 CCL25O15444 150 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 NXPH4O95158 308 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 MAJINQ3KP22 176 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 GNRH2O43555 120 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 ZNF25P17030 456 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 XCL1P47992 114 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 UBE2AP49459 152 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 GATD1Q8NB37 220 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 CHAC1Q9BUX1 264 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 CNFNQ9BYD5 112 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 PRB4P10163 310 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 ORAOV1Q8WV07 137 aa6.39□□□□□ -1.39
PDLIM5-201ENST00000317968 IGHV4-4A0A075B6R2 117 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 SOCS3O14543 225 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 C2orf66Q6UXQ4 117 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 GTSF1Q8WW33 167 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 CLPSL2Q6UWE3 100 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 LAMTOR3Q9UHA4 124 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 FHL3Q13643 280 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 TAL2Q16559 108 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 C10orf99Q6UWK7 81 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 SMIM2Q9BVW6 85 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 A0A0U1RRA0 63 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 ETDCA0A1B0GVM5 59 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 HERV-K104P63124 156 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 OXLD1Q5BKU9 147 aa6.38□□□□□ -1.39
PDLIM5-201ENST00000317968 TRAV26-1A0A087WT03 109 aa6.37□□□□□ -1.39
PDLIM5-201ENST00000317968 SIVA1O15304 175 aa6.37□□□□□ -1.39
PDLIM5-201ENST00000317968 IGLV1-51P01701 117 aa6.37□□□□□ -1.39
PDLIM5-201ENST00000317968 ZFP2Q6ZN57 461 aa6.37□□□□□ -1.39
PDLIM5-201ENST00000317968 ATXN8Q156A1 80 aa6.37□□□□□ -1.39
PDLIM5-201ENST00000317968 Q8N1Y9 231 aa6.37□□□□□ -1.39
PDLIM5-201ENST00000317968 NOTCH3Q9UM47 2321 aa6.37□□□□□ -1.39
PDLIM5-201ENST00000317968 IGHV4-30-4P0DP06 118 aa6.37□□□□□ -1.39
PDLIM5-201ENST00000317968 RPL32P62910 135 aaKnown RBP6.37□□□□□ -1.39
PDLIM5-201ENST00000317968 IGHV4-28A0A0C4DH34 117 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 H7C423 109 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 SLC25A29Q8N8R3 303 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 SPATA3Q8NHX4 192 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 VSIG2Q96IQ7 327 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 C20orf173Q96LM9 149 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 VPS25Q9BRG1 176 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 GTSF1LQ9H1H1 148 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 MGAQ8IWI9 3026 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 LINC00467Q9BRT7 94 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 ESM1Q9NQ30 184 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 B9D2Q9BPU9 175 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 ERG28Q9UKR5 140 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 MTORP42345 2549 aa6.36□□□□□ -1.39
PDLIM5-201ENST00000317968 ZNF80P51504 273 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-201ENST00000317968 GAGE2BQ13066 116 aa6.35□□□□□ -1.39
PDLIM5-201ENST00000317968 PTH2Q96A98 100 aa6.35□□□□□ -1.39
PDLIM5-201ENST00000317968 HELZ2Q9BYK8 2649 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms