RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ACACBO00763 2458 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 IGHV3-49A0A0A0MS15 119 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 IGHV3-74A0A0B4J1X5 117 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 FABP5P3A8MUU1 101 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 A8MWP6 167 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 PSMB8P28062 276 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 HBBP68871 147 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 FAM162BQ5T6X4 162 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 TMEM78Q5T7P6 136 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 SAMD13Q5VXD3 122 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 LINC00322Q6ZN03 302 aaPredicted RBP2.61□□□□□ -1.99
SMCO3-201ENST00000316048 TCF24Q7RTU0 167 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 GPHB5Q86YW7 130 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 TMEM86BQ8N661 226 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 Q8N976 141 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 HIST1H2BLQ99880 126 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 NIT2Q9NQR4 276 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 DAZ1Q9NQZ3 744 aaKnown RBP2.61□□□□□ -1.99
SMCO3-201ENST00000316048 WNK2Q9Y3S1 2297 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 DOPEY1Q5JWR5 2465 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 IGSF10Q6WRI0 2623 aa2.61□□□□□ -1.99
SMCO3-201ENST00000316048 IGKV2-40A0A087WW87 121 aaPredicted RBP2.6□□□□□ -1.99
SMCO3-201ENST00000316048 IGHV7-4-1A0A0J9YVY3 117 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 A0A1B0GUT8 65 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 TINCRA0A1B0GVN0 87 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 ZNF705FA8MVS1 300 aaPredicted RBP2.6□□□□□ -1.99
SMCO3-201ENST00000316048 OVOL1O14753 267 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 IGKV2D-40P01614 121 aaPredicted RBP2.6□□□□□ -1.99
SMCO3-201ENST00000316048 DNAH10OSP0CZ25 163 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 ZNF25P17030 456 aaPredicted RBP2.6□□□□□ -1.99
SMCO3-201ENST00000316048 TAL2Q16559 108 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 DNLZQ5SXM8 178 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 UNQ9165/PRO28630Q6UXU0 137 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 UBE2E2Q96LR5 201 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 LINC00477Q96M19 166 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 RHPN1-AS1Q9BWJ2 59 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 SS18L2Q9UHA2 77 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 A0A1B0GXF2 115 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 GRIFINA4D1Z8 144 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 SH2D1AO60880 128 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 TRBV12-3P01733 135 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 ESDP10768 282 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 HLA-DMBP28068 263 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 SRIP30626 198 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 CRIP1P50238 77 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 HIST1H1AQ02539 215 aaPredicted RBP2.6□□□□□ -1.99
SMCO3-201ENST00000316048 TMEM256Q8N2U0 113 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 RNF182Q8N6D2 247 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 SIGLECL1Q8N7X8 197 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 WFDC11Q8NEX6 87 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 SAMD10Q9BYL1 202 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 AGPAT4-IT1Q9H0P7 198 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 LENEPQ9Y5L5 61 aa2.6□□□□□ -1.99
SMCO3-201ENST00000316048 SMIM26A0A096LP01 95 aa2.59□□□□□ -1.99
SMCO3-201ENST00000316048 TRAV8-2A0A0B4J237 113 aa2.59□□□□□ -1.99
SMCO3-201ENST00000316048 F2Z2F3 143 aa2.59□□□□□ -1.99
SMCO3-201ENST00000316048 TSTD3H0UI37 97 aa2.59□□□□□ -1.99
SMCO3-201ENST00000316048 LGALS9O00182 355 aa2.59□□□□□ -1.99
SMCO3-201ENST00000316048 LGALS1P09382 135 aaKnown RBP2.59□□□□□ -1.99
SMCO3-201ENST00000316048 GZMBP10144 247 aa2.59□□□□□ -1.99
SMCO3-201ENST00000316048 ERCC8Q13216 396 aa2.59□□□□□ -1.99
SMCO3-201ENST00000316048 JOSD1Q15040 202 aaPredicted RBP2.59□□□□□ -1.99
SMCO3-201ENST00000316048 RBMY1FQ15415 496 aaKnown RBP2.59□□□□□ -1.99
SMCO3-201ENST00000316048 C4orf26Q17RF5 130 aa2.59□□□□□ -1.99
SMCO3-201ENST00000316048 PYY3Q5JQD4 70 aa2.59□□□□□ -1.99
SMCO3-201ENST00000316048 Q8N2B8 174 aa2.59□□□□□ -1.99
SMCO3-201ENST00000316048 USP24Q9UPU5 2620 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 TMSB15BA0A087X1C1 80 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 A0A096LNJ9 63 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 LOC102724200A0A096LPH7 203 aaPredicted RBP2.59□□□□□ -2
SMCO3-201ENST00000316048 GPX1P07203 203 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 PRB4P10163 310 aaPredicted RBP2.59□□□□□ -2
SMCO3-201ENST00000316048 KRTAP10-5P60370 271 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 IQCJQ1A5X6 159 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 GDF5OSQ5U4N7 250 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 LYZL1Q6UWQ5 148 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 FER1L6-AS1Q8NA97 138 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 Q8TAT8 98 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 C18orf32Q8TCD1 76 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 VPS25Q9BRG1 176 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 MED13LQ71F56 2210 aa2.59□□□□□ -2
SMCO3-201ENST00000316048 DCHS2Q6V1P9 2916 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 NACAE9PAV3 2078 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 ABCA2Q9BZC7 2435 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 IGKV3-7A0A075B6H7 116 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 A0A0J9YXV3 536 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 A0A1B0GVX0 72 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 A6NDN8 102 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 H0Y9J4 135 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 NUPR1O60356 82 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 ARMS2P0C7Q2 107 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 ZNF80P51504 273 aaPredicted RBP2.58□□□□□ -2
SMCO3-201ENST00000316048 SNRPD3P62318 126 aaKnown RBP2.58□□□□□ -2
SMCO3-201ENST00000316048 C10orf99Q6UWK7 81 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 NIT1Q86X76 327 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 GATD1Q8NB37 220 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 OR8A1Q8NGG7 326 aa2.58□□□□□ -2
SMCO3-201ENST00000316048 MYOZ3Q8TDC0 251 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms