RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 PMCHL1Q16048 86 aa16.08■□□□□ 0.16
IRF3-201ENST00000309877 Q8NAQ8 132 aa16.08■□□□□ 0.16
IRF3-201ENST00000309877 K7EIL1 84 aa16.07■□□□□ 0.16
IRF3-201ENST00000309877 CIDEAO60543 219 aa16.07■□□□□ 0.16
IRF3-201ENST00000309877 DEFB121Q5J5C9 76 aa16.07■□□□□ 0.16
IRF3-201ENST00000309877 Q6ZSN1 163 aa16.07■□□□□ 0.16
IRF3-201ENST00000309877 IGLV2-18A0A075B6J9 118 aa16.06■□□□□ 0.16
IRF3-201ENST00000309877 IGHV1-24A0A0C4DH33 117 aa16.06■□□□□ 0.16
IRF3-201ENST00000309877 TRBV6-5A0A0K0K1A5 114 aa16.06■□□□□ 0.16
IRF3-201ENST00000309877 FAM222AQ5U5X8 452 aa16.06■□□□□ 0.16
IRF3-201ENST00000309877 LINC00612Q8N6U2 182 aa16.05■□□□□ 0.16
IRF3-201ENST00000309877 RETNQ9HD89 108 aa16.05■□□□□ 0.16
IRF3-201ENST00000309877 LINC01546A6NGU7 62 aa16.05■□□□□ 0.16
IRF3-201ENST00000309877 SDHAF1A6NFY7 115 aa16.04■□□□□ 0.16
IRF3-201ENST00000309877 P0DMU3 169 aa16.04■□□□□ 0.16
IRF3-201ENST00000309877 FAM231AP0DMU4 169 aa16.04■□□□□ 0.16
IRF3-201ENST00000309877 FAM231CP0DMU5 169 aa16.04■□□□□ 0.16
IRF3-201ENST00000309877 RPL32P62910 135 aaKnown RBP16.04■□□□□ 0.16
IRF3-201ENST00000309877 TMEM70Q9BUB7 260 aa16.04■□□□□ 0.16
IRF3-201ENST00000309877 DKK2Q9UBU2 259 aa16.04■□□□□ 0.16
IRF3-201ENST00000309877 TNFRSF18Q9Y5U5 241 aa16.04■□□□□ 0.16
IRF3-201ENST00000309877 VCYO14598 125 aa16.03■□□□□ 0.16
IRF3-201ENST00000309877 POLR2KP53803 58 aaKnown RBP16.03■□□□□ 0.16
IRF3-201ENST00000309877 KRTAP21-3Q3LHN1 58 aa16.03■□□□□ 0.16
IRF3-201ENST00000309877 DNAH3Q8TD57 4116 aa16.02■□□□□ 0.16
IRF3-201ENST00000309877 TRGV4A0A0C4DH28 118 aa16.02■□□□□ 0.16
IRF3-201ENST00000309877 TCAPO15273 167 aa16.02■□□□□ 0.16
IRF3-201ENST00000309877 LAGE3Q14657 143 aa16.02■□□□□ 0.16
IRF3-201ENST00000309877 NEGR1Q7Z3B1 354 aa16.02■□□□□ 0.15
IRF3-201ENST00000309877 C18orf15Q96N68 181 aa16.02■□□□□ 0.15
IRF3-201ENST00000309877 NACAE9PAV3 2078 aa16.01■□□□□ 0.15
IRF3-201ENST00000309877 SBSPONQ8IVN8 264 aa16.01■□□□□ 0.15
IRF3-201ENST00000309877 DNAJC30Q96LL9 226 aa16.01■□□□□ 0.15
IRF3-201ENST00000309877 NBEAL2Q6ZNJ1 2754 aa16■□□□□ 0.15
IRF3-201ENST00000309877 K7EMI3 77 aa16■□□□□ 0.15
IRF3-201ENST00000309877 K7EQD1 137 aa16■□□□□ 0.15
IRF3-201ENST00000309877 LEPROTL1O95214 131 aa16■□□□□ 0.15
IRF3-201ENST00000309877 HBDP02042 147 aa16■□□□□ 0.15
IRF3-201ENST00000309877 SPART-AS1P0CW21 52 aa16■□□□□ 0.15
IRF3-201ENST00000309877 NEXN-AS1Q8NBZ9 246 aa16■□□□□ 0.15
IRF3-201ENST00000309877 KIR2DL4Q99706 377 aa16■□□□□ 0.15
IRF3-201ENST00000309877 ORMDL2Q53FV1 153 aa15.99■□□□□ 0.15
IRF3-201ENST00000309877 TRBV27A0A0K0K1C4 114 aa15.99■□□□□ 0.15
IRF3-201ENST00000309877 FCER1GP30273 86 aa15.99■□□□□ 0.15
IRF3-201ENST00000309877 DAD1P61803 113 aa15.99■□□□□ 0.15
IRF3-201ENST00000309877 SLC25A29Q8N8R3 303 aa15.99■□□□□ 0.15
IRF3-201ENST00000309877 TRBV10-1A0A0K0K1A3 114 aa15.98■□□□□ 0.15
IRF3-201ENST00000309877 FHL2Q14192 279 aa15.98■□□□□ 0.15
IRF3-201ENST00000309877 Q9UF83 564 aa15.98■□□□□ 0.15
IRF3-201ENST00000309877 CELA1Q9UNI1 258 aa15.98■□□□□ 0.15
IRF3-201ENST00000309877 NOTCH1P46531 2555 aa15.97■□□□□ 0.15
IRF3-201ENST00000309877 A0A096LNJ9 63 aa15.97■□□□□ 0.15
IRF3-201ENST00000309877 I3L3M4 83 aa15.97■□□□□ 0.15
IRF3-201ENST00000309877 NUDT3O95989 172 aa15.97■□□□□ 0.15
IRF3-201ENST00000309877 MRAPQ8TCY5 172 aa15.97■□□□□ 0.15
IRF3-201ENST00000309877 HSPB8Q9UJY1 196 aa15.97■□□□□ 0.15
IRF3-201ENST00000309877 MGAM2Q2M2H8 2515 aa15.96■□□□□ 0.15
IRF3-201ENST00000309877 TEX48A0A1B0GUV7 120 aa15.96■□□□□ 0.15
IRF3-201ENST00000309877 TRBV6-4A0A1B0GX49 114 aa15.96■□□□□ 0.15
IRF3-201ENST00000309877 SPATA25Q9BR10 227 aa15.96■□□□□ 0.15
IRF3-201ENST00000309877 BTF3P20290 206 aaKnown RBP15.95■□□□□ 0.14
IRF3-201ENST00000309877 KRTDAPP60985 99 aa15.95■□□□□ 0.14
IRF3-201ENST00000309877 RPL36AP83881 106 aaKnown RBP15.95■□□□□ 0.14
IRF3-201ENST00000309877 DEFB104AQ8WTQ1 72 aa15.95■□□□□ 0.14
IRF3-201ENST00000309877 RPL36ALQ969Q0 106 aaKnown RBP15.95■□□□□ 0.14
IRF3-201ENST00000309877 ZNRF2Q8NHG8 242 aa15.95■□□□□ 0.14
IRF3-201ENST00000309877 RHOHQ15669 191 aa15.94■□□□□ 0.14
IRF3-201ENST00000309877 TRBV7-3A0A075B6L6 115 aa15.93■□□□□ 0.14
IRF3-201ENST00000309877 LINC00173Q6ZV60 143 aa15.93■□□□□ 0.14
IRF3-201ENST00000309877 PRADC1Q9BSG0 188 aa15.93■□□□□ 0.14
IRF3-201ENST00000309877 HHLA3Q9XRX5 114 aa15.93■□□□□ 0.14
IRF3-201ENST00000309877 C11orf68Q9H3H3 251 aaKnown RBP15.92■□□□□ 0.14
IRF3-201ENST00000309877 C3orf79P0CE67 100 aa15.92■□□□□ 0.14
IRF3-201ENST00000309877 G0S2P27469 103 aa15.92■□□□□ 0.14
IRF3-201ENST00000309877 PYY3Q5JQD4 70 aa15.92■□□□□ 0.14
IRF3-201ENST00000309877 TM2D3Q9BRN9 247 aa15.92■□□□□ 0.14
IRF3-201ENST00000309877 NBEAL1Q6ZS30 2694 aa15.91■□□□□ 0.14
IRF3-201ENST00000309877 GAGE12JA6NER3 117 aa15.91■□□□□ 0.14
IRF3-201ENST00000309877 TSHBP01222 138 aa15.91■□□□□ 0.14
IRF3-201ENST00000309877 ATP5G1P05496 136 aa15.91■□□□□ 0.14
IRF3-201ENST00000309877 SMIM6P0DI80 62 aa15.91■□□□□ 0.14
IRF3-201ENST00000309877 GAGE1Q13065 139 aa15.91■□□□□ 0.14
IRF3-201ENST00000309877 GAGE4Q13068 117 aa15.91■□□□□ 0.14
IRF3-201ENST00000309877 GAGE5Q13069 117 aa15.91■□□□□ 0.14
IRF3-201ENST00000309877 JOSD1Q15040 202 aaPredicted RBP15.91■□□□□ 0.14
IRF3-201ENST00000309877 GAGE13Q4V321 117 aa15.91■□□□□ 0.14
IRF3-201ENST00000309877 SCGB1D1O95968 90 aa15.9■□□□□ 0.14
IRF3-201ENST00000309877 PHLDA1Q8WV24 401 aaPredicted RBP15.9■□□□□ 0.14
IRF3-201ENST00000309877 MAP1LC3CQ9BXW4 147 aa15.9■□□□□ 0.14
IRF3-201ENST00000309877 PRO0255Q9UI72 69 aa15.89■□□□□ 0.13
IRF3-201ENST00000309877 IGHV3-38A0A0C4DH36 116 aa15.89■□□□□ 0.13
IRF3-201ENST00000309877 A0A0J9YWU9 116 aa15.88■□□□□ 0.13
IRF3-201ENST00000309877 LOC100131303A0A0U1RQF7 123 aa15.88■□□□□ 0.13
IRF3-201ENST00000309877 C2orf66Q6UXQ4 117 aa15.88■□□□□ 0.13
IRF3-201ENST00000309877 TOMM6Q96B49 74 aa15.88■□□□□ 0.13
IRF3-201ENST00000309877 CRYBA4P53673 196 aa15.87■□□□□ 0.13
IRF3-201ENST00000309877 UBE2D3P61077 147 aa15.87■□□□□ 0.13
IRF3-201ENST00000309877 UBE2D2P62837 147 aa15.87■□□□□ 0.13
IRF3-201ENST00000309877 COTL1Q14019 142 aa15.87■□□□□ 0.13
IRF3-201ENST00000309877 DAZ4Q86SG3 579 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms