RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 UBE2BP63146 152 aa12.17□□□□□ -0.46
USP42-201ENST00000306177 TINCRA0A1B0GVN0 87 aa12.17□□□□□ -0.46
USP42-201ENST00000306177 CCL25O15444 150 aa12.16□□□□□ -0.46
USP42-201ENST00000306177 CCL18P55774 89 aa12.16□□□□□ -0.46
USP42-201ENST00000306177 ORMDL1Q9P0S3 153 aa12.16□□□□□ -0.46
USP42-201ENST00000306177 LRRC75A-AS1Q8N1F1 130 aa12.16□□□□□ -0.46
USP42-201ENST00000306177 COX7B2Q8TF08 81 aa12.16□□□□□ -0.46
USP42-201ENST00000306177 TDRG1Q3Y452 100 aa12.16□□□□□ -0.46
USP42-201ENST00000306177 MUSTN1Q8IVN3 82 aa12.16□□□□□ -0.46
USP42-201ENST00000306177 GAGE12HA6NDE8 117 aa12.15□□□□□ -0.46
USP42-201ENST00000306177 DNAJC9-AS1A6NH13 148 aa12.15□□□□□ -0.46
USP42-201ENST00000306177 IGLL5B9A064 214 aa12.15□□□□□ -0.46
USP42-201ENST00000306177 BAALC-AS2P0C853 105 aa12.15□□□□□ -0.46
USP42-201ENST00000306177 SND1-IT1Q9HBX3 110 aa12.15□□□□□ -0.46
USP42-201ENST00000306177 IGHV3-30P01768 117 aa12.15□□□□□ -0.46
USP42-201ENST00000306177 IGHV3-33P01772 117 aa12.15□□□□□ -0.46
USP42-201ENST00000306177 FRMD6-AS1P0C7T7 363 aa12.15□□□□□ -0.46
USP42-201ENST00000306177 IGHV3-30-3P0DP02 117 aa12.15□□□□□ -0.46
USP42-201ENST00000306177 IGHV3-30-5P0DP03 117 aa12.15□□□□□ -0.46
USP42-201ENST00000306177 EIF4EBP1Q13541 118 aaPredicted RBP12.15□□□□□ -0.47
USP42-201ENST00000306177 C1orf229Q6ZS94 237 aaPredicted RBP12.15□□□□□ -0.47
USP42-201ENST00000306177 ESM1Q9NQ30 184 aa12.15□□□□□ -0.47
USP42-201ENST00000306177 MDFICQ9P1T7 246 aa12.15□□□□□ -0.47
USP42-201ENST00000306177 PKIGQ9Y2B9 76 aa12.14□□□□□ -0.47
USP42-201ENST00000306177 LINC01548A6NM66 108 aa12.14□□□□□ -0.47
USP42-201ENST00000306177 IGF1P05019 195 aa12.14□□□□□ -0.47
USP42-201ENST00000306177 HIST2H2BCQ6DN03 193 aa12.14□□□□□ -0.47
USP42-201ENST00000306177 TLN1Q9Y490 2541 aaKnown RBP12.14□□□□□ -0.47
USP42-201ENST00000306177 A4D1N5 150 aa12.14□□□□□ -0.47
USP42-201ENST00000306177 INSL3P51460 131 aa12.14□□□□□ -0.47
USP42-201ENST00000306177 DEFB135Q30KP9 77 aa12.14□□□□□ -0.47
USP42-201ENST00000306177 ZNF295-AS1Q8N0V1 137 aa12.14□□□□□ -0.47
USP42-201ENST00000306177 TMEM263Q8WUH6 116 aaKnown RBP12.14□□□□□ -0.47
USP42-201ENST00000306177 MKI67P46013 3256 aaKnown RBP12.14□□□□□ -0.47
USP42-201ENST00000306177 HIGD1BQ9P298 99 aa12.13□□□□□ -0.47
USP42-201ENST00000306177 MAP6D1Q9H9H5 199 aa12.13□□□□□ -0.47
USP42-201ENST00000306177 RPL18AQ02543 176 aaKnown RBP12.13□□□□□ -0.47
USP42-201ENST00000306177 E9PLD3 99 aa12.12□□□□□ -0.47
USP42-201ENST00000306177 ANKRD29Q8N6D5 301 aa12.12□□□□□ -0.47
USP42-201ENST00000306177 H0YGX0 51 aa12.12□□□□□ -0.47
USP42-201ENST00000306177 NUP210LQ5VU65 1888 aa12.12□□□□□ -0.47
USP42-201ENST00000306177 PLA2G5P39877 138 aa12.12□□□□□ -0.47
USP42-201ENST00000306177 C11orf86A6NJI1 115 aa12.11□□□□□ -0.47
USP42-201ENST00000306177 HIVEP3Q5T1R4 2406 aa12.11□□□□□ -0.47
USP42-201ENST00000306177 TNRC6AQ8NDV7 1962 aaKnown RBP12.11□□□□□ -0.47
USP42-201ENST00000306177 WDR87Q6ZQQ6 2873 aa12.11□□□□□ -0.47
USP42-201ENST00000306177 IGLV2-8P01709 118 aa12.11□□□□□ -0.47
USP42-201ENST00000306177 ZNF80P51504 273 aaPredicted RBP12.11□□□□□ -0.47
USP42-201ENST00000306177 C15orf53Q8NAA6 179 aa12.11□□□□□ -0.47
USP42-201ENST00000306177 VSIG2Q96IQ7 327 aa12.11□□□□□ -0.47
USP42-201ENST00000306177 DSCAMO60469 2012 aa12.11□□□□□ -0.47
USP42-201ENST00000306177 ARHGAP21Q5T5U3 1957 aa12.11□□□□□ -0.47
USP42-201ENST00000306177 A0A1B0GXF2 115 aa12.11□□□□□ -0.47
USP42-201ENST00000306177 CRYGBP07316 175 aa12.11□□□□□ -0.47
USP42-201ENST00000306177 NAV3Q8IVL0 2385 aa12.1□□□□□ -0.47
USP42-201ENST00000306177 C20orf203Q8NBC4 194 aa12.1□□□□□ -0.47
USP42-201ENST00000306177 ODF1Q14990 250 aa12.1□□□□□ -0.47
USP42-201ENST00000306177 Q6YL49 198 aa12.1□□□□□ -0.47
USP42-201ENST00000306177 NACAE9PAV3 2078 aa12.1□□□□□ -0.47
USP42-201ENST00000306177 ETDCA0A1B0GVM5 59 aa12.1□□□□□ -0.47
USP42-201ENST00000306177 TTTY13Q9BZ97 58 aa12.1□□□□□ -0.47
USP42-201ENST00000306177 PTPRSQ13332 1948 aa12.1□□□□□ -0.47
USP42-201ENST00000306177 EBI3Q14213 229 aa12.09□□□□□ -0.47
USP42-201ENST00000306177 ODF3Q96PU9 254 aa12.09□□□□□ -0.47
USP42-201ENST00000306177 TRBV10-1A0A0K0K1A3 114 aa12.09□□□□□ -0.47
USP42-201ENST00000306177 IGHV4-31P0DP07 118 aa12.09□□□□□ -0.47
USP42-201ENST00000306177 FXYD2P54710 66 aa12.09□□□□□ -0.47
USP42-201ENST00000306177 LINC00322Q6ZN03 302 aaPredicted RBP12.09□□□□□ -0.47
USP42-201ENST00000306177 DEFB105AQ8NG35 78 aa12.09□□□□□ -0.47
USP42-201ENST00000306177 SMAD5-AS1Q9Y6J3 95 aa12.09□□□□□ -0.47
USP42-201ENST00000306177 F8W735 103 aaPredicted RBP12.08□□□□□ -0.47
USP42-201ENST00000306177 LGALS9O00182 355 aa12.08□□□□□ -0.47
USP42-201ENST00000306177 LY6LH3BQJ8 138 aa12.08□□□□□ -0.48
USP42-201ENST00000306177 DEFB4AO15263 64 aa12.08□□□□□ -0.48
USP42-201ENST00000306177 NDUFA1O15239 70 aa12.08□□□□□ -0.48
USP42-201ENST00000306177 CXCL5P42830 114 aa12.08□□□□□ -0.48
USP42-201ENST00000306177 CRYBA4P53673 196 aa12.08□□□□□ -0.48
USP42-201ENST00000306177 PRO0255Q9UI72 69 aa12.07□□□□□ -0.48
USP42-201ENST00000306177 MLST8Q9BVC4 326 aa12.07□□□□□ -0.48
USP42-201ENST00000306177 C11orf71Q6IPW1 123 aa12.07□□□□□ -0.48
USP42-201ENST00000306177 ACYP1P07311 99 aa12.07□□□□□ -0.48
USP42-201ENST00000306177 DAND5Q8N907 189 aa12.07□□□□□ -0.48
USP42-201ENST00000306177 IGHV4-4A0A075B6R2 117 aa12.06□□□□□ -0.48
USP42-201ENST00000306177 hADV29S1A0JD25 119 aa12.06□□□□□ -0.48
USP42-201ENST00000306177 OPRPNQ99935 248 aaPredicted RBP12.06□□□□□ -0.48
USP42-201ENST00000306177 IGLC6P0CF74 106 aa12.06□□□□□ -0.48
USP42-201ENST00000306177 IGHV1-58A0A0C4DH39 117 aa12.06□□□□□ -0.48
USP42-201ENST00000306177 TIRAPP58753 221 aa12.06□□□□□ -0.48
USP42-201ENST00000306177 K7EQG2 157 aa12.05□□□□□ -0.48
USP42-201ENST00000306177 NDUFA11Q86Y39 141 aa12.05□□□□□ -0.48
USP42-201ENST00000306177 TRACP01848 142 aa12.04□□□□□ -0.48
USP42-201ENST00000306177 ABCA2Q9BZC7 2435 aa12.04□□□□□ -0.48
USP42-201ENST00000306177 WFDC11Q8NEX6 87 aa12.04□□□□□ -0.48
USP42-201ENST00000306177 SPAG11BQ08648 103 aa12.04□□□□□ -0.48
USP42-201ENST00000306177 SPATA12Q7Z6I5 190 aa12.04□□□□□ -0.48
USP42-201ENST00000306177 TP53TG3Q9ULZ0 132 aa12.04□□□□□ -0.48
USP42-201ENST00000306177 FUSP35637 526 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP42-201ENST00000306177 LINC01620Q4KN68 170 aa12.03□□□□□ -0.48
USP42-201ENST00000306177 KLK12Q9UKR0 248 aa12.03□□□□□ -0.48
USP42-201ENST00000306177 TMEM258P61165 79 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms