RNA–Protein interactions for RNA: ENST00000301305.7

SLC39A4-202, Transcript of solute carrier family 39 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A4, Length 2,174 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-202ENST00000301305 SPINK13Q1W4C9 94 aa16.41■□□□□ 0.22
SLC39A4-202ENST00000301305 TMEM95Q3KNT9 176 aa16.41■□□□□ 0.22
SLC39A4-202ENST00000301305 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.4■□□□□ 0.22
SLC39A4-202ENST00000301305 TCL1BO95988 128 aa16.4■□□□□ 0.22
SLC39A4-202ENST00000301305 IGLV4-3A0A075B6K6 122 aa16.4■□□□□ 0.22
SLC39A4-202ENST00000301305 A8MWV9 139 aa16.4■□□□□ 0.22
SLC39A4-202ENST00000301305 A0A1B0GV72 72 aa16.39■□□□□ 0.21
SLC39A4-202ENST00000301305 IGHV4-59P01825 116 aa16.39■□□□□ 0.21
SLC39A4-202ENST00000301305 IGKV3-20P01619 116 aa16.38■□□□□ 0.21
SLC39A4-202ENST00000301305 DEFB112Q30KQ8 113 aa16.38■□□□□ 0.21
SLC39A4-202ENST00000301305 TCTEX1D4Q5JR98 221 aa16.38■□□□□ 0.21
SLC39A4-202ENST00000301305 LINC01356Q8N9X3 169 aa16.38■□□□□ 0.21
SLC39A4-202ENST00000301305 ZNF418Q8TF45 676 aaPredicted RBP16.37■□□□□ 0.21
SLC39A4-202ENST00000301305 PTH2Q96A98 100 aa16.37■□□□□ 0.21
SLC39A4-202ENST00000301305 A8MTW9 85 aa16.37■□□□□ 0.21
SLC39A4-202ENST00000301305 SCGB1C2P0DMR2 95 aa16.37■□□□□ 0.21
SLC39A4-202ENST00000301305 UBE2E2Q96LR5 201 aa16.37■□□□□ 0.21
SLC39A4-202ENST00000301305 A4D1N5 150 aa16.36■□□□□ 0.21
SLC39A4-202ENST00000301305 SYNJ2BPP57105 145 aa16.36■□□□□ 0.21
SLC39A4-202ENST00000301305 DEFB104AQ8WTQ1 72 aa16.36■□□□□ 0.21
SLC39A4-202ENST00000301305 M0R2P5 195 aa16.36■□□□□ 0.21
SLC39A4-202ENST00000301305 TMEM263Q8WUH6 116 aaKnown RBP16.36■□□□□ 0.21
SLC39A4-202ENST00000301305 TRAV2A0A0B4J234 112 aa16.35■□□□□ 0.21
SLC39A4-202ENST00000301305 IGHV3-33P01772 117 aa16.35■□□□□ 0.21
SLC39A4-202ENST00000301305 Q5PR19 223 aa16.35■□□□□ 0.21
SLC39A4-202ENST00000301305 OPRPNQ99935 248 aaPredicted RBP16.35■□□□□ 0.21
SLC39A4-202ENST00000301305 ERG28Q9UKR5 140 aa16.35■□□□□ 0.21
SLC39A4-202ENST00000301305 MRPS36P82909 103 aaKnown RBP16.34■□□□□ 0.21
SLC39A4-202ENST00000301305 AKAP6Q13023 2319 aa16.34■□□□□ 0.21
SLC39A4-202ENST00000301305 A0A0J9YXV3 536 aa16.34■□□□□ 0.21
SLC39A4-202ENST00000301305 SFTA2Q6UW10 78 aa16.34■□□□□ 0.21
SLC39A4-202ENST00000301305 CDIP1Q9H305 208 aa16.34■□□□□ 0.21
SLC39A4-202ENST00000301305 HOXD3P31249 432 aaPredicted RBP16.33■□□□□ 0.2
SLC39A4-202ENST00000301305 C10orf99Q6UWK7 81 aa16.32■□□□□ 0.2
SLC39A4-202ENST00000301305 VPREB3Q9UKI3 123 aa16.32■□□□□ 0.2
SLC39A4-202ENST00000301305 CD28P10747 220 aa16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 MUSTN1Q8IVN3 82 aa16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 CARD19Q96LW7 228 aa16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 LINC01600Q96MT4 127 aa16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 TIMM21Q9BVV7 248 aa16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 SPTAN1Q13813 2472 aaKnown RBP16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 ASH1LQ9NR48 2969 aaKnown RBP16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 A0A0J9YXY3 114 aa16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 TMEM262E9PQX1 116 aa16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 SPANXA1Q9NS26 97 aa16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 TNFRSF18Q9Y5U5 241 aa16.31■□□□□ 0.2
SLC39A4-202ENST00000301305 IGHV3-30-3P0DP02 117 aa16.3■□□□□ 0.2
SLC39A4-202ENST00000301305 LINC00467Q9BRT7 94 aa16.29■□□□□ 0.2
SLC39A4-202ENST00000301305 ZNF415Q09FC8 603 aa16.28■□□□□ 0.2
SLC39A4-202ENST00000301305 IGHV1-58A0A0C4DH39 117 aa16.28■□□□□ 0.2
SLC39A4-202ENST00000301305 TINCRA0A1B0GVN0 87 aa16.28■□□□□ 0.2
SLC39A4-202ENST00000301305 SLC25A20O43772 301 aa16.28■□□□□ 0.2
SLC39A4-202ENST00000301305 DNAJC30Q96LL9 226 aa16.28■□□□□ 0.2
SLC39A4-202ENST00000301305 SPANXDQ9BXN6 97 aa16.28■□□□□ 0.2
SLC39A4-202ENST00000301305 SPANXCQ9NY87 97 aa16.28■□□□□ 0.2
SLC39A4-202ENST00000301305 RNF183Q96D59 192 aa16.27■□□□□ 0.2
SLC39A4-202ENST00000301305 CHD8Q9HCK8 2581 aa16.27■□□□□ 0.2
SLC39A4-202ENST00000301305 ATXN8Q156A1 80 aa16.27■□□□□ 0.19
SLC39A4-202ENST00000301305 ANKRD29Q8N6D5 301 aa16.27■□□□□ 0.19
SLC39A4-202ENST00000301305 ZNF702PQ9H963 129 aa16.27■□□□□ 0.19
SLC39A4-202ENST00000301305 TRBV30A0A0K0K1B3 111 aa16.26■□□□□ 0.19
SLC39A4-202ENST00000301305 RBMY1A1P0DJD3 496 aaKnown RBP16.26■□□□□ 0.19
SLC39A4-202ENST00000301305 RBMY1CP0DJD4 496 aa16.26■□□□□ 0.19
SLC39A4-202ENST00000301305 RBMY1FQ15415 496 aaKnown RBP16.26■□□□□ 0.19
SLC39A4-202ENST00000301305 DUX5Q96PT3 197 aa16.26■□□□□ 0.19
SLC39A4-202ENST00000301305 H3BMM0 161 aa16.26■□□□□ 0.19
SLC39A4-202ENST00000301305 EIF4EBP3O60516 100 aaPredicted RBP16.26■□□□□ 0.19
SLC39A4-202ENST00000301305 Q6YL49 198 aa16.26■□□□□ 0.19
SLC39A4-202ENST00000301305 Q6ZUT4 128 aa16.26■□□□□ 0.19
SLC39A4-202ENST00000301305 RAX2Q96IS3 184 aa16.26■□□□□ 0.19
SLC39A4-202ENST00000301305 NCOR2Q9Y618 2525 aa16.25■□□□□ 0.19
SLC39A4-202ENST00000301305 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■■□□ 16.3
SLC39A4-202ENST00000301305 SPINK8P0C7L1 97 aa16.25■□□□□ 0.19
SLC39A4-202ENST00000301305 FAM104AQ969W3 186 aa16.25■□□□□ 0.19
SLC39A4-202ENST00000301305 A0A096LNT2 108 aa16.24■□□□□ 0.19
SLC39A4-202ENST00000301305 SPXQ9BT56 116 aa16.24■□□□□ 0.19
SLC39A4-202ENST00000301305 IGHV3-64A0A075B6Q5 118 aa16.24■□□□□ 0.19
SLC39A4-202ENST00000301305 FSHBP01225 129 aa16.24■□□□□ 0.19
SLC39A4-202ENST00000301305 CKS1BP61024 79 aa16.24■□□□□ 0.19
SLC39A4-202ENST00000301305 DUX3Q96PT4 197 aa16.24■□□□□ 0.19
SLC39A4-202ENST00000301305 LITAFQ99732 161 aa16.24■□□□□ 0.19
SLC39A4-202ENST00000301305 DEFB131AP59861 70 aa16.23■□□□□ 0.19
SLC39A4-202ENST00000301305 PEMTQ9UBM1 199 aa16.23■□□□□ 0.19
SLC39A4-202ENST00000301305 KNCNA6PVL3 124 aa16.23■□□□□ 0.19
SLC39A4-202ENST00000301305 C9JAW5 83 aa16.23■□□□□ 0.19
SLC39A4-202ENST00000301305 TIMM17BO60830 172 aa16.23■□□□□ 0.19
SLC39A4-202ENST00000301305 CHCHD7Q9BUK0 85 aa16.22■□□□□ 0.19
SLC39A4-202ENST00000301305 YAE1D1Q9NRH1 226 aa16.22■□□□□ 0.19
SLC39A4-202ENST00000301305 UBE2D4Q9Y2X8 147 aa16.22■□□□□ 0.19
SLC39A4-202ENST00000301305 FHL3Q13643 280 aa16.21■□□□□ 0.19
SLC39A4-202ENST00000301305 Q1RN00 199 aa16.21■□□□□ 0.19
SLC39A4-202ENST00000301305 VSIG2Q96IQ7 327 aa16.21■□□□□ 0.19
SLC39A4-202ENST00000301305 NDUFA12Q9UI09 145 aa16.21■□□□□ 0.19
SLC39A4-202ENST00000301305 SVEP1Q4LDE5 3571 aa16.21■□□□□ 0.19
SLC39A4-202ENST00000301305 TGFAP01135 160 aa16.21■□□□□ 0.19
SLC39A4-202ENST00000301305 IGHV3-53P01767 116 aa16.2■□□□□ 0.18
SLC39A4-202ENST00000301305 MIAQ16674 131 aa16.2■□□□□ 0.18
SLC39A4-202ENST00000301305 LINC01620Q4KN68 170 aa16.2■□□□□ 0.18
SLC39A4-202ENST00000301305 XGP55808 180 aa16.19■□□□□ 0.18
SLC39A4-202ENST00000301305 BEAN1Q3B7T3 259 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms