RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 IGHV1-69DA0A0B4J2H0 117 aa10.97□□□□□ -0.65
COL6A2-201ENST00000300527 H3BMM0 161 aa10.97□□□□□ -0.65
COL6A2-201ENST00000300527 TRIAP1O43715 76 aa10.97□□□□□ -0.65
COL6A2-201ENST00000300527 UBE2WQ96B02 151 aa10.97□□□□□ -0.65
COL6A2-201ENST00000300527 POLR2KP53803 58 aaKnown RBP10.97□□□□□ -0.65
COL6A2-201ENST00000300527 RHODO00212 210 aa10.96□□□□□ -0.65
COL6A2-201ENST00000300527 CITED1Q99966 193 aa10.96□□□□□ -0.65
COL6A2-201ENST00000300527 HRNRQ86YZ3 2850 aaPredicted RBP10.96□□□□□ -0.65
COL6A2-201ENST00000300527 BSNQ9UPA5 3926 aa10.96□□□□□ -0.65
COL6A2-201ENST00000300527 LINC00315P59091 139 aa10.96□□□□□ -0.66
COL6A2-201ENST00000300527 HERV-K104P63124 156 aa10.96□□□□□ -0.66
COL6A2-201ENST00000300527 SIRPDQ9H106 197 aa10.96□□□□□ -0.66
COL6A2-201ENST00000300527 LENEPQ9Y5L5 61 aa10.96□□□□□ -0.66
COL6A2-201ENST00000300527 U3KQE9 123 aa10.96□□□□□ -0.66
COL6A2-201ENST00000300527 ZNF22P17026 224 aaPredicted RBP10.95□□□□□ -0.66
COL6A2-201ENST00000300527 SBSPONQ8IVN8 264 aa10.95□□□□□ -0.66
COL6A2-201ENST00000300527 AMELXQ99217 191 aa10.95□□□□□ -0.66
COL6A2-201ENST00000300527 CD28P10747 220 aa10.95□□□□□ -0.66
COL6A2-201ENST00000300527 UBE2E1P51965 193 aa10.95□□□□□ -0.66
COL6A2-201ENST00000300527 TIMM17AQ99595 171 aa10.95□□□□□ -0.66
COL6A2-201ENST00000300527 NPFFO15130 113 aa10.94□□□□□ -0.66
COL6A2-201ENST00000300527 LEPROTO15243 131 aa10.94□□□□□ -0.66
COL6A2-201ENST00000300527 P0DMU3 169 aa10.94□□□□□ -0.66
COL6A2-201ENST00000300527 FAM231AP0DMU4 169 aa10.94□□□□□ -0.66
COL6A2-201ENST00000300527 FAM231CP0DMU5 169 aa10.94□□□□□ -0.66
COL6A2-201ENST00000300527 C5orf56Q8N8D9 126 aa10.94□□□□□ -0.66
COL6A2-201ENST00000300527 BPESC1Q9GZL8 116 aa10.94□□□□□ -0.66
COL6A2-201ENST00000300527 KIF25-AS1Q9Y6Z4 181 aa10.94□□□□□ -0.66
COL6A2-201ENST00000300527 TMEM223A0PJW6 202 aa10.94□□□□□ -0.66
COL6A2-201ENST00000300527 KNCNA6PVL3 124 aa10.94□□□□□ -0.66
COL6A2-201ENST00000300527 A0A0J9YXY3 114 aa10.93□□□□□ -0.66
COL6A2-201ENST00000300527 SPINK13Q1W4C9 94 aa10.93□□□□□ -0.66
COL6A2-201ENST00000300527 IGF2-ASQ6U949 168 aa10.93□□□□□ -0.66
COL6A2-201ENST00000300527 TIMM21Q9BVV7 248 aa10.93□□□□□ -0.66
COL6A2-201ENST00000300527 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.93□□□□□ -0.66
COL6A2-201ENST00000300527 FOXC1Q12948 553 aa10.93□□□□□ -0.66
COL6A2-201ENST00000300527 ZNF625Q96I27 306 aaPredicted RBP10.93□□□□□ -0.66
COL6A2-201ENST00000300527 CHCHD5Q9BSY4 110 aa10.93□□□□□ -0.66
COL6A2-201ENST00000300527 MEIG1Q5JSS6 88 aa10.92□□□□□ -0.66
COL6A2-201ENST00000300527 M0R2P5 195 aa10.92□□□□□ -0.66
COL6A2-201ENST00000300527 IGHV3-30-3P0DP02 117 aa10.92□□□□□ -0.66
COL6A2-201ENST00000300527 ODF3Q96PU9 254 aa10.92□□□□□ -0.66
COL6A2-201ENST00000300527 PRRC2AP48634 2157 aaKnown RBP10.91□□□□□ -0.66
COL6A2-201ENST00000300527 COX6CP09669 75 aa10.91□□□□□ -0.66
COL6A2-201ENST00000300527 SHISA2Q6UWI4 295 aa10.91□□□□□ -0.66
COL6A2-201ENST00000300527 TRBV7-9A0A0J9YWB2 115 aa10.91□□□□□ -0.66
COL6A2-201ENST00000300527 TRBV10-2A0A0K0K1G8 114 aa10.91□□□□□ -0.66
COL6A2-201ENST00000300527 ICOSQ9Y6W8 199 aa10.91□□□□□ -0.66
COL6A2-201ENST00000300527 MUC6Q6W4X9 2439 aa10.91□□□□□ -0.66
COL6A2-201ENST00000300527 PRM2P04554 102 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 ADAMTSL4-AS1Q5T5F5 129 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 NDUFA12Q9UI09 145 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 MOB4Q9Y3A3 225 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 IGHV4OR15-8A0A075B7B6 117 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 A0A087WW49 117 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 PROK1P58294 105 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 BLCAPP62952 87 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 ZFHX3Q15911 3703 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 A0A0B4J2C4 111 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 NDUFA4O00483 81 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 SOCS3O14543 225 aa10.9□□□□□ -0.66
COL6A2-201ENST00000300527 DUX5Q96PT3 197 aa10.89□□□□□ -0.67
COL6A2-201ENST00000300527 IGLV4-3A0A075B6K6 122 aa10.89□□□□□ -0.67
COL6A2-201ENST00000300527 TRBV27A0A0K0K1C4 114 aa10.89□□□□□ -0.67
COL6A2-201ENST00000300527 A0A1W2PPR1 153 aa10.89□□□□□ -0.67
COL6A2-201ENST00000300527 FAM223BA6NKX1 122 aa10.89□□□□□ -0.67
COL6A2-201ENST00000300527 M0QY20 66 aa10.89□□□□□ -0.67
COL6A2-201ENST00000300527 RPL13AP40429 203 aaKnown RBP10.89□□□□□ -0.67
COL6A2-201ENST00000300527 FAM223AQ8IWN6 122 aa10.89□□□□□ -0.67
COL6A2-201ENST00000300527 IGHV3-38A0A0C4DH36 116 aa10.88□□□□□ -0.67
COL6A2-201ENST00000300527 H7C423 109 aa10.88□□□□□ -0.67
COL6A2-201ENST00000300527 C20orf203Q8NBC4 194 aa10.88□□□□□ -0.67
COL6A2-201ENST00000300527 ID1P41134 155 aa10.88□□□□□ -0.67
COL6A2-201ENST00000300527 RPL32P62910 135 aaKnown RBP10.88□□□□□ -0.67
COL6A2-201ENST00000300527 MED14OSP0DP75 135 aa10.88□□□□□ -0.67
COL6A2-201ENST00000300527 LGALS9O00182 355 aa10.87□□□□□ -0.67
COL6A2-201ENST00000300527 H3BUX3 64 aa10.87□□□□□ -0.67
COL6A2-201ENST00000300527 I3L3M4 83 aa10.86□□□□□ -0.67
COL6A2-201ENST00000300527 DAZ1Q9NQZ3 744 aaKnown RBP10.86□□□□□ -0.67
COL6A2-201ENST00000300527 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-201ENST00000300527 IGKV2-29A2NJV5 120 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-201ENST00000300527 IGHV3-16A0A0C4DH30 117 aa10.85□□□□□ -0.67
COL6A2-201ENST00000300527 Q9UF83 564 aa10.85□□□□□ -0.67
COL6A2-201ENST00000300527 C11orf71Q6IPW1 123 aa10.85□□□□□ -0.67
COL6A2-201ENST00000300527 TRGV11A0A075B6L2 103 aa10.85□□□□□ -0.67
COL6A2-201ENST00000300527 HIVEP3Q5T1R4 2406 aa10.84□□□□□ -0.67
COL6A2-201ENST00000300527 KLLNB2CW77 178 aa10.84□□□□□ -0.67
COL6A2-201ENST00000300527 ADORA2A-AS1P86434 159 aa10.84□□□□□ -0.67
COL6A2-201ENST00000300527 TNFRSF18Q9Y5U5 241 aa10.84□□□□□ -0.67
COL6A2-201ENST00000300527 CUBNO60494 3623 aa10.84□□□□□ -0.67
COL6A2-201ENST00000300527 RHOHQ15669 191 aa10.83□□□□□ -0.67
COL6A2-201ENST00000300527 NCOR2Q9Y618 2525 aa10.83□□□□□ -0.67
COL6A2-201ENST00000300527 TRBV30A0A0K0K1B3 111 aa10.83□□□□□ -0.68
COL6A2-201ENST00000300527 IGHV1-69P01742 117 aa10.83□□□□□ -0.68
COL6A2-201ENST00000300527 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
COL6A2-201ENST00000300527 FAM236AA0A1B0GUQ0 79 aa10.83□□□□□ -0.68
COL6A2-201ENST00000300527 FAM236BA0A1B0GV22 79 aa10.83□□□□□ -0.68
COL6A2-201ENST00000300527 RS1O15537 224 aa10.83□□□□□ -0.68
COL6A2-201ENST00000300527 NXPH4O95158 308 aa10.83□□□□□ -0.68
COL6A2-201ENST00000300527 FAM19A4Q96LR4 140 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms