RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 A0A087WWC5 75 aa18.35■□□□□ 0.53
SSU72-201ENST00000291386 RIGQ13278 110 aa18.35■□□□□ 0.53
SSU72-201ENST00000291386 DNAH2Q9P225 4427 aa18.35■□□□□ 0.53
SSU72-201ENST00000291386 TRAV8-6A0A0B4J262 113 aa18.34■□□□□ 0.53
SSU72-201ENST00000291386 F8W036 122 aa18.34■□□□□ 0.53
SSU72-201ENST00000291386 DNAH10OSP0CZ25 163 aa18.34■□□□□ 0.53
SSU72-201ENST00000291386 ANAPC16Q96DE5 110 aa18.34■□□□□ 0.53
SSU72-201ENST00000291386 SEC11CQ9BY50 192 aa18.34■□□□□ 0.53
SSU72-201ENST00000291386 TMEM191AQ9H0A3 160 aa18.34■□□□□ 0.53
SSU72-201ENST00000291386 K7EP13 123 aa18.33■□□□□ 0.52
SSU72-201ENST00000291386 BTF3P20290 206 aaKnown RBP18.33■□□□□ 0.52
SSU72-201ENST00000291386 RASL11AQ6T310 242 aa18.33■□□□□ 0.52
SSU72-201ENST00000291386 KRTAP1-5Q9BYS1 174 aa18.33■□□□□ 0.52
SSU72-201ENST00000291386 MT-ND4LP03901 98 aa18.32■□□□□ 0.52
SSU72-201ENST00000291386 OR10J3Q5JRS4 329 aa18.32■□□□□ 0.52
SSU72-201ENST00000291386 FRZBQ92765 325 aa18.32■□□□□ 0.52
SSU72-201ENST00000291386 IGHV3-38A0A0C4DH36 116 aa18.3■□□□□ 0.52
SSU72-201ENST00000291386 DAZ4Q86SG3 579 aaKnown RBP18.3■□□□□ 0.52
SSU72-201ENST00000291386 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.3■□□□□ 0.52
SSU72-201ENST00000291386 GATD1Q8NB37 220 aa18.3■□□□□ 0.52
SSU72-201ENST00000291386 NIT2Q9NQR4 276 aa18.3■□□□□ 0.52
SSU72-201ENST00000291386 DAZ3Q9NR90 486 aaKnown RBP18.3■□□□□ 0.52
SSU72-201ENST00000291386 TNFRSF18Q9Y5U5 241 aa18.3■□□□□ 0.52
SSU72-201ENST00000291386 A0A1B0GW15 77 aa18.29■□□□□ 0.52
SSU72-201ENST00000291386 LINC01556Q5JQF7 62 aa18.29■□□□□ 0.52
SSU72-201ENST00000291386 C10orf91Q5T1B1 145 aa18.29■□□□□ 0.52
SSU72-201ENST00000291386 C1orf134Q5TEV5 83 aa18.29■□□□□ 0.52
SSU72-201ENST00000291386 DNAH17Q9UFH2 4485 aa18.28■□□□□ 0.52
SSU72-201ENST00000291386 FRAS1Q86XX4 4008 aa18.28■□□□□ 0.52
SSU72-201ENST00000291386 TRAV9-2A0A087WT02 112 aa18.27■□□□□ 0.52
SSU72-201ENST00000291386 RTL8CO15255 209 aa18.27■□□□□ 0.52
SSU72-201ENST00000291386 TMEM97Q5BJF2 176 aa18.27■□□□□ 0.52
SSU72-201ENST00000291386 C6orf223Q8N319 242 aa18.27■□□□□ 0.52
SSU72-201ENST00000291386 LINC00336Q6ZUF6 198 aa18.26■□□□□ 0.51
SSU72-201ENST00000291386 RNF185Q96GF1 192 aa18.26■□□□□ 0.51
SSU72-201ENST00000291386 TRAV26-2A0A0B4J265 109 aa18.25■□□□□ 0.51
SSU72-201ENST00000291386 RAB4AP20338 218 aa18.25■□□□□ 0.51
SSU72-201ENST00000291386 C10orf126Q8N4M7 172 aa18.25■□□□□ 0.51
SSU72-201ENST00000291386 TRBV6-8A0A0A6YYG3 113 aa18.24■□□□□ 0.51
SSU72-201ENST00000291386 CARHSP1Q9Y2V2 147 aaKnown RBP18.24■□□□□ 0.51
SSU72-201ENST00000291386 A0A1B0GXF2 115 aa18.23■□□□□ 0.51
SSU72-201ENST00000291386 AMN1Q8IY45 258 aa18.23■□□□□ 0.51
SSU72-201ENST00000291386 S100A8P05109 93 aa18.22■□□□□ 0.51
SSU72-201ENST00000291386 ATP5L2Q7Z4Y8 100 aa18.22■□□□□ 0.51
SSU72-201ENST00000291386 MRAP2Q96G30 205 aa18.22■□□□□ 0.51
SSU72-201ENST00000291386 CTDSP1Q9GZU7 261 aa18.22■□□□□ 0.51
SSU72-201ENST00000291386 HBBP68871 147 aa18.21■□□□□ 0.51
SSU72-201ENST00000291386 IMMP2LQ96T52 175 aa18.21■□□□□ 0.51
SSU72-201ENST00000291386 CAMPP49913 170 aa18.2■□□□□ 0.5
SSU72-201ENST00000291386 FAM104BQ5XKR9 115 aa18.2■□□□□ 0.5
SSU72-201ENST00000291386 MRPL54Q6P161 138 aaKnown RBP18.2■□□□□ 0.5
SSU72-201ENST00000291386 NTM-AS1Q6ZSK4 140 aa18.2■□□□□ 0.5
SSU72-201ENST00000291386 NIT1Q86X76 327 aa18.2■□□□□ 0.5
SSU72-201ENST00000291386 RPL39LQ96EH5 51 aaKnown RBP18.2■□□□□ 0.5
SSU72-201ENST00000291386 TRBV6-5A0A0K0K1A5 114 aa18.19■□□□□ 0.5
SSU72-201ENST00000291386 CHCHD7Q9BUK0 85 aa18.19■□□□□ 0.5
SSU72-201ENST00000291386 KCNIP4Q6PIL6 250 aa18.18■□□□□ 0.5
SSU72-201ENST00000291386 FAT2Q9NYQ8 4349 aa18.17■□□□□ 0.5
SSU72-201ENST00000291386 IGHV3-30P01768 117 aa18.17■□□□□ 0.5
SSU72-201ENST00000291386 IGHV3-33P01772 117 aa18.17■□□□□ 0.5
SSU72-201ENST00000291386 IGHV3-30-3P0DP02 117 aa18.17■□□□□ 0.5
SSU72-201ENST00000291386 IGHV3-30-5P0DP03 117 aa18.17■□□□□ 0.5
SSU72-201ENST00000291386 IQCJQ1A5X6 159 aa18.17■□□□□ 0.5
SSU72-201ENST00000291386 IBA57-AS1B1ANH7 110 aa18.16■□□□□ 0.5
SSU72-201ENST00000291386 GAS8-AS1O95177 125 aa18.16■□□□□ 0.5
SSU72-201ENST00000291386 TMEM242Q9NWH2 141 aa18.16■□□□□ 0.5
SSU72-201ENST00000291386 TRBV25-1A0A075B6N4 114 aa18.15■□□□□ 0.5
SSU72-201ENST00000291386 PRSS29PA6NIE9 313 aa18.15■□□□□ 0.5
SSU72-201ENST00000291386 NFE4Q86UQ8 179 aa18.15■□□□□ 0.5
SSU72-201ENST00000291386 PPP1R17O96001 155 aa18.14■□□□□ 0.49
SSU72-201ENST00000291386 PKIAP61925 76 aa18.14■□□□□ 0.49
SSU72-201ENST00000291386 LAGE3Q14657 143 aa18.14■□□□□ 0.49
SSU72-201ENST00000291386 MRPL51Q4U2R6 128 aaKnown RBP18.14■□□□□ 0.49
SSU72-201ENST00000291386 Q6ZRN7 208 aaPredicted RBP18.14■□□□□ 0.49
SSU72-201ENST00000291386 BTF3L4Q96K17 158 aa18.14■□□□□ 0.49
SSU72-201ENST00000291386 IGHV1-24A0A0C4DH33 117 aa18.13■□□□□ 0.49
SSU72-201ENST00000291386 SDHAF1A6NFY7 115 aa18.13■□□□□ 0.49
SSU72-201ENST00000291386 Q8N3U1 123 aa18.13■□□□□ 0.49
SSU72-201ENST00000291386 CLRN3Q8NCR9 226 aa18.13■□□□□ 0.49
SSU72-201ENST00000291386 URGCP-MRPS24S4R325 110 aa18.13■□□□□ 0.49
SSU72-201ENST00000291386 RPS10P46783 165 aaKnown RBP18.12■□□□□ 0.49
SSU72-201ENST00000291386 COTL1Q14019 142 aa18.12■□□□□ 0.49
SSU72-201ENST00000291386 RHEBQ15382 184 aa18.12■□□□□ 0.49
SSU72-201ENST00000291386 ST20Q9HBF5 79 aa18.12■□□□□ 0.49
SSU72-201ENST00000291386 EPPK1P58107 5090 aaKnown RBP18.12■□□□□ 0.49
SSU72-201ENST00000291386 C7orf77A4D0Y5 90 aa18.11■□□□□ 0.49
SSU72-201ENST00000291386 CHCHD5Q9BSY4 110 aa18.11■□□□□ 0.49
SSU72-201ENST00000291386 TRAV9-1A0A075B6T8 112 aa18.1■□□□□ 0.49
SSU72-201ENST00000291386 A0A087WX48 190 aa18.1■□□□□ 0.49
SSU72-201ENST00000291386 NCR2O95944 276 aa18.1■□□□□ 0.49
SSU72-201ENST00000291386 POLR2KP53803 58 aaKnown RBP18.1■□□□□ 0.49
SSU72-201ENST00000291386 NRACQ8N912 160 aa18.1■□□□□ 0.49
SSU72-201ENST00000291386 SMKR1H3BMG3 65 aa18.09■□□□□ 0.49
SSU72-201ENST00000291386 TMEM70Q9BUB7 260 aa18.09■□□□□ 0.49
SSU72-201ENST00000291386 A0A1B0GVY2 172 aa18.08■□□□□ 0.48
SSU72-201ENST00000291386 TMEM262E9PQX1 116 aa18.08■□□□□ 0.48
SSU72-201ENST00000291386 I3L3M4 83 aa18.08■□□□□ 0.48
SSU72-201ENST00000291386 ELOBQ15370 118 aa18.08■□□□□ 0.48
SSU72-201ENST00000291386 TRBV24-1A0A075B6N3 115 aa18.07■□□□□ 0.48
SSU72-201ENST00000291386 TRBV27A0A0K0K1C4 114 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms