RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PCDH15Q96QU1 1955 aa11.67□□□□□ -0.54
SHROOM4-201ENST00000289292 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
SHROOM4-201ENST00000289292 MLST8Q9BVC4 326 aa11.67□□□□□ -0.54
SHROOM4-201ENST00000289292 NCOA6Q14686 2063 aaPredicted RBP11.67□□□□□ -0.54
SHROOM4-201ENST00000289292 KIAA1549Q9HCM3 1950 aa11.67□□□□□ -0.54
SHROOM4-201ENST00000289292 DEFB4AO15263 64 aa11.67□□□□□ -0.54
SHROOM4-201ENST00000289292 FREM1Q5H8C1 2179 aa11.66□□□□□ -0.54
SHROOM4-201ENST00000289292 IGHV1-58A0A0C4DH39 117 aa11.66□□□□□ -0.54
SHROOM4-201ENST00000289292 WFDC9Q8NEX5 89 aa11.66□□□□□ -0.54
SHROOM4-201ENST00000289292 PIFOQ8TCI5 191 aa11.66□□□□□ -0.54
SHROOM4-201ENST00000289292 MIR7-3HGQ8N6C7 128 aa11.66□□□□□ -0.54
SHROOM4-201ENST00000289292 C16orf74Q96GX8 76 aa11.66□□□□□ -0.54
SHROOM4-201ENST00000289292 C20orf173Q96LM9 149 aa11.66□□□□□ -0.54
SHROOM4-201ENST00000289292 TRBV7-3A0A075B6L6 115 aa11.66□□□□□ -0.54
SHROOM4-201ENST00000289292 H0YGX0 51 aa11.66□□□□□ -0.54
SHROOM4-201ENST00000289292 BRK1Q8WUW1 75 aa11.66□□□□□ -0.54
SHROOM4-201ENST00000289292 WFDC11Q8NEX6 87 aa11.65□□□□□ -0.54
SHROOM4-201ENST00000289292 H3BT86 120 aa11.65□□□□□ -0.54
SHROOM4-201ENST00000289292 COX7A2LO14548 114 aa11.65□□□□□ -0.54
SHROOM4-201ENST00000289292 C22orf34Q6ZV56 151 aa11.64□□□□□ -0.55
SHROOM4-201ENST00000289292 SPATA25Q9BR10 227 aa11.64□□□□□ -0.55
SHROOM4-201ENST00000289292 TANC2Q9HCD6 1990 aa11.64□□□□□ -0.55
SHROOM4-201ENST00000289292 NACAE9PAV3 2078 aa11.64□□□□□ -0.55
SHROOM4-201ENST00000289292 TRAV23DV6A0A075B6W5 121 aa11.64□□□□□ -0.55
SHROOM4-201ENST00000289292 SDIM1Q6ZPB5 146 aa11.64□□□□□ -0.55
SHROOM4-201ENST00000289292 NDUFC2O95298 119 aa11.64□□□□□ -0.55
SHROOM4-201ENST00000289292 UBE2BP63146 152 aa11.64□□□□□ -0.55
SHROOM4-201ENST00000289292 A0A0J9YXY3 114 aa11.64□□□□□ -0.55
SHROOM4-201ENST00000289292 IGLC6P0CF74 106 aa11.63□□□□□ -0.55
SHROOM4-201ENST00000289292 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
SHROOM4-201ENST00000289292 ATP5G1P05496 136 aa11.63□□□□□ -0.55
SHROOM4-201ENST00000289292 CGB3P0DN86 165 aa11.63□□□□□ -0.55
SHROOM4-201ENST00000289292 MED14OSP0DP75 135 aa11.63□□□□□ -0.55
SHROOM4-201ENST00000289292 SIRPDQ9H106 197 aa11.63□□□□□ -0.55
SHROOM4-201ENST00000289292 C20orf203Q8NBC4 194 aa11.63□□□□□ -0.55
SHROOM4-201ENST00000289292 SPRY4Q9C004 299 aa11.63□□□□□ -0.55
SHROOM4-201ENST00000289292 ZGRF1Q86YA3 2104 aa11.62□□□□□ -0.55
SHROOM4-201ENST00000289292 NEXN-AS1Q8NBZ9 246 aa11.62□□□□□ -0.55
SHROOM4-201ENST00000289292 CAMK2N2Q96S95 79 aa11.62□□□□□ -0.55
SHROOM4-201ENST00000289292 GPR179Q6PRD1 2367 aa11.61□□□□□ -0.55
SHROOM4-201ENST00000289292 MIAQ16674 131 aa11.61□□□□□ -0.55
SHROOM4-201ENST00000289292 PCNX1Q96RV3 2341 aa11.61□□□□□ -0.55
SHROOM4-201ENST00000289292 CGB7P0DN87 165 aa11.61□□□□□ -0.55
SHROOM4-201ENST00000289292 RNF185Q96GF1 192 aa11.61□□□□□ -0.55
SHROOM4-201ENST00000289292 SMAD5-AS1Q9Y6J3 95 aa11.61□□□□□ -0.55
SHROOM4-201ENST00000289292 C2orf91Q6ZV80 131 aa11.6□□□□□ -0.55
SHROOM4-201ENST00000289292 HHLA3Q9XRX5 114 aa11.6□□□□□ -0.55
SHROOM4-201ENST00000289292 HIST2H2BDQ6DRA6 164 aa11.6□□□□□ -0.55
SHROOM4-201ENST00000289292 TM2D2Q9BX73 214 aa11.6□□□□□ -0.55
SHROOM4-201ENST00000289292 C10orf105Q8TEF2 133 aa11.59□□□□□ -0.55
SHROOM4-201ENST00000289292 ACACAQ13085 2346 aa11.59□□□□□ -0.55
SHROOM4-201ENST00000289292 A0A0J9YX75 114 aa11.59□□□□□ -0.55
SHROOM4-201ENST00000289292 LINC00643Q86TS7 51 aa11.59□□□□□ -0.55
SHROOM4-201ENST00000289292 CLPSL1A2RUU4 121 aa11.59□□□□□ -0.55
SHROOM4-201ENST00000289292 NREPQ16612 68 aa11.58□□□□□ -0.56
SHROOM4-201ENST00000289292 RNF152Q8N8N0 203 aa11.58□□□□□ -0.56
SHROOM4-201ENST00000289292 MPLKIPQ8TAP9 179 aa11.58□□□□□ -0.56
SHROOM4-201ENST00000289292 MED12LQ86YW9 2145 aa11.58□□□□□ -0.56
SHROOM4-201ENST00000289292 ETDCA0A1B0GVM5 59 aa11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 IGLV2-11P01706 119 aa11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 LINC00467Q9BRT7 94 aa11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 ABCA1O95477 2261 aa11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 K7EMT4 169 aa11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 GAS8-AS1O95177 125 aa11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 SLPIP03973 132 aa11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 DSCAML1Q8TD84 2053 aa11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 FUSP35637 526 aaKnown RBP eCLIP11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 GPHB5Q86YW7 130 aa11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 INSL3P51460 131 aa11.57□□□□□ -0.56
SHROOM4-201ENST00000289292 CACNA1BQ00975 2339 aa11.56□□□□□ -0.56
SHROOM4-201ENST00000289292 CCDC179H3BU77 68 aa11.56□□□□□ -0.56
SHROOM4-201ENST00000289292 PROK1P58294 105 aa11.56□□□□□ -0.56
SHROOM4-201ENST00000289292 CLUHP3Q96NS8 147 aa11.56□□□□□ -0.56
SHROOM4-201ENST00000289292 UPK3BQ9BT76 320 aa11.56□□□□□ -0.56
SHROOM4-201ENST00000289292 A8MZ25 164 aa11.56□□□□□ -0.56
SHROOM4-201ENST00000289292 U3KQK5 164 aa11.56□□□□□ -0.56
SHROOM4-201ENST00000289292 TMEM223A0PJW6 202 aa11.56□□□□□ -0.56
SHROOM4-201ENST00000289292 ODF3BA8MYP8 253 aa11.56□□□□□ -0.56
SHROOM4-201ENST00000289292 TRIAP1O43715 76 aa11.55□□□□□ -0.56
SHROOM4-201ENST00000289292 LINC00574Q9H8X3 128 aa11.55□□□□□ -0.56
SHROOM4-201ENST00000289292 C3orf22Q8N5N4 141 aa11.55□□□□□ -0.56
SHROOM4-201ENST00000289292 JMJD7-PLA2G4BH0Y9G9 81 aa11.54□□□□□ -0.56
SHROOM4-201ENST00000289292 MRPS12O15235 138 aaKnown RBP11.54□□□□□ -0.56
SHROOM4-201ENST00000289292 MYCNOSP40205 109 aa11.54□□□□□ -0.56
SHROOM4-201ENST00000289292 MAP6D1Q9H9H5 199 aa11.54□□□□□ -0.56
SHROOM4-201ENST00000289292 DEFB113Q30KQ7 82 aa11.54□□□□□ -0.56
SHROOM4-201ENST00000289292 A0A0U1RQV1 116 aa11.54□□□□□ -0.56
SHROOM4-201ENST00000289292 C20orf197Q8N268 126 aa11.54□□□□□ -0.56
SHROOM4-201ENST00000289292 Q8NA96 180 aa11.54□□□□□ -0.56
SHROOM4-201ENST00000289292 COL4A4P53420 1690 aaPredicted RBP11.53□□□□□ -0.56
SHROOM4-201ENST00000289292 ATG2AQ2TAZ0 1938 aa11.53□□□□□ -0.56
SHROOM4-201ENST00000289292 A6NDX4 124 aa11.53□□□□□ -0.56
SHROOM4-201ENST00000289292 UQCRQO14949 82 aa11.53□□□□□ -0.56
SHROOM4-201ENST00000289292 LINC00310P59036 64 aa11.53□□□□□ -0.56
SHROOM4-201ENST00000289292 ZNF22P17026 224 aaPredicted RBP11.53□□□□□ -0.56
SHROOM4-201ENST00000289292 DEFB135Q30KP9 77 aa11.53□□□□□ -0.56
SHROOM4-201ENST00000289292 C4orf3Q8WVX3 66 aa11.52□□□□□ -0.56
SHROOM4-201ENST00000289292 DOPEY2Q9Y3R5 2298 aa11.52□□□□□ -0.56
SHROOM4-201ENST00000289292 PIK3CD-AS1Q5SR53 167 aa11.52□□□□□ -0.56
SHROOM4-201ENST00000289292 RMI2Q96E14 147 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 345.6 ms