RNA–Protein interactions for RNA: ENST00000288197.9

CACNA2D3-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-201ENST00000288197 UCNP55089 124 aa12.13□□□□□ -0.47
CACNA2D3-201ENST00000288197 TRAV12-1A0A0B4J245 112 aa12.13□□□□□ -0.47
CACNA2D3-201ENST00000288197 CLUHP3Q96NS8 147 aa12.13□□□□□ -0.47
CACNA2D3-201ENST00000288197 CNFNQ9BYD5 112 aa12.13□□□□□ -0.47
CACNA2D3-201ENST00000288197 IGLV2-18A0A075B6J9 118 aa12.13□□□□□ -0.47
CACNA2D3-201ENST00000288197 Q8N6K4 173 aa12.13□□□□□ -0.47
CACNA2D3-201ENST00000288197 UBE2E2Q96LR5 201 aa12.13□□□□□ -0.47
CACNA2D3-201ENST00000288197 DCHS2Q6V1P9 2916 aa12.12□□□□□ -0.47
CACNA2D3-201ENST00000288197 TRBV7-3A0A075B6L6 115 aa12.12□□□□□ -0.47
CACNA2D3-201ENST00000288197 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.12□□□□□ -0.47
CACNA2D3-201ENST00000288197 IGKV2-29A2NJV5 120 aaPredicted RBP12.12□□□□□ -0.47
CACNA2D3-201ENST00000288197 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
CACNA2D3-201ENST00000288197 USMG5Q96IX5 58 aa12.12□□□□□ -0.47
CACNA2D3-201ENST00000288197 TRAV13-1A0A0B4J241 112 aa12.12□□□□□ -0.47
CACNA2D3-201ENST00000288197 M0R2P5 195 aa12.12□□□□□ -0.47
CACNA2D3-201ENST00000288197 LMO4P61968 165 aa12.12□□□□□ -0.47
CACNA2D3-201ENST00000288197 ZMAT4Q9H898 229 aa12.12□□□□□ -0.47
CACNA2D3-201ENST00000288197 CUBNO60494 3623 aa12.11□□□□□ -0.47
CACNA2D3-201ENST00000288197 TRAV8-4A0A0B4J246 113 aa12.11□□□□□ -0.47
CACNA2D3-201ENST00000288197 C10orf126Q8N4M7 172 aa12.11□□□□□ -0.47
CACNA2D3-201ENST00000288197 A8MZ25 164 aa12.11□□□□□ -0.47
CACNA2D3-201ENST00000288197 IGHV4-59P01825 116 aa12.11□□□□□ -0.47
CACNA2D3-201ENST00000288197 RNASE3P12724 160 aaKnown RBP12.11□□□□□ -0.47
CACNA2D3-201ENST00000288197 IGHV1OR15-1A0A075B7D0 117 aa12.1□□□□□ -0.47
CACNA2D3-201ENST00000288197 B5MCH6 92 aa12.1□□□□□ -0.47
CACNA2D3-201ENST00000288197 MORN3Q6PF18 240 aaPredicted RBP12.1□□□□□ -0.47
CACNA2D3-201ENST00000288197 C3orf56Q8N813 242 aa12.1□□□□□ -0.47
CACNA2D3-201ENST00000288197 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
CACNA2D3-201ENST00000288197 CFC1BP0CG36 223 aa12.1□□□□□ -0.47
CACNA2D3-201ENST00000288197 CFC1P0CG37 223 aa12.1□□□□□ -0.47
CACNA2D3-201ENST00000288197 MRPL53Q96EL3 112 aaKnown RBP12.1□□□□□ -0.47
CACNA2D3-201ENST00000288197 TEN1Q86WV5 123 aa12.1□□□□□ -0.47
CACNA2D3-201ENST00000288197 A0A0J9YY99 117 aa12.09□□□□□ -0.47
CACNA2D3-201ENST00000288197 NDUFA12Q9UI09 145 aa12.09□□□□□ -0.47
CACNA2D3-201ENST00000288197 ZNF580Q9UK33 172 aa12.09□□□□□ -0.47
CACNA2D3-201ENST00000288197 CRYBA4P53673 196 aa12.09□□□□□ -0.47
CACNA2D3-201ENST00000288197 PROK1P58294 105 aa12.09□□□□□ -0.47
CACNA2D3-201ENST00000288197 TMEM141Q96I45 108 aa12.09□□□□□ -0.47
CACNA2D3-201ENST00000288197 SRSF2Q01130 221 aaKnown RBP12.08□□□□□ -0.48
CACNA2D3-201ENST00000288197 EBI3Q14213 229 aa12.08□□□□□ -0.48
CACNA2D3-201ENST00000288197 LENEPQ9Y5L5 61 aa12.08□□□□□ -0.48
CACNA2D3-201ENST00000288197 C19orf84I3L1E1 186 aa12.08□□□□□ -0.48
CACNA2D3-201ENST00000288197 ZNF462Q96JM2 2506 aa12.08□□□□□ -0.48
CACNA2D3-201ENST00000288197 ANKRD17O75179 2603 aaKnown RBP12.07□□□□□ -0.48
CACNA2D3-201ENST00000288197 TMEM262E9PQX1 116 aa12.07□□□□□ -0.48
CACNA2D3-201ENST00000288197 I3L3M4 83 aa12.07□□□□□ -0.48
CACNA2D3-201ENST00000288197 CIRBPQ14011 172 aaKnown RBP12.07□□□□□ -0.48
CACNA2D3-201ENST00000288197 ATXN8Q156A1 80 aa12.07□□□□□ -0.48
CACNA2D3-201ENST00000288197 XCL2Q9UBD3 114 aa12.07□□□□□ -0.48
CACNA2D3-201ENST00000288197 IGHV4-30-2A0A087WSY4 118 aa12.07□□□□□ -0.48
CACNA2D3-201ENST00000288197 TSPEAR-AS2P59090 65 aa12.07□□□□□ -0.48
CACNA2D3-201ENST00000288197 XGP55808 180 aa12.06□□□□□ -0.48
CACNA2D3-201ENST00000288197 ZNRF2Q8NHG8 242 aa12.06□□□□□ -0.48
CACNA2D3-201ENST00000288197 Q6ZUT4 128 aa12.06□□□□□ -0.48
CACNA2D3-201ENST00000288197 NFE4Q86UQ8 179 aa12.06□□□□□ -0.48
CACNA2D3-201ENST00000288197 RNF183Q96D59 192 aa12.06□□□□□ -0.48
CACNA2D3-201ENST00000288197 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.06□□□□□ -0.48
CACNA2D3-201ENST00000288197 CLEC2BQ92478 149 aa12.05□□□□□ -0.48
CACNA2D3-201ENST00000288197 MSMBP08118 114 aa12.05□□□□□ -0.48
CACNA2D3-201ENST00000288197 TCTEX1D4Q5JR98 221 aa12.05□□□□□ -0.48
CACNA2D3-201ENST00000288197 C11orf71Q6IPW1 123 aa12.05□□□□□ -0.48
CACNA2D3-201ENST00000288197 C11orf68Q9H3H3 251 aaKnown RBP12.05□□□□□ -0.48
CACNA2D3-201ENST00000288197 RNASE1P07998 156 aaKnown RBP12.05□□□□□ -0.48
CACNA2D3-201ENST00000288197 CRIP2P52943 208 aaPredicted RBP12.05□□□□□ -0.48
CACNA2D3-201ENST00000288197 RS1O15537 224 aa12.04□□□□□ -0.48
CACNA2D3-201ENST00000288197 CFHR3Q02985 330 aa12.04□□□□□ -0.48
CACNA2D3-201ENST00000288197 CFAP126Q5VTH2 177 aa12.04□□□□□ -0.48
CACNA2D3-201ENST00000288197 TRGV1A0A0A0MS02 117 aa12.04□□□□□ -0.48
CACNA2D3-201ENST00000288197 TRGV11A0A075B6L2 103 aa12.04□□□□□ -0.48
CACNA2D3-201ENST00000288197 TEX49A0A1B0GTD5 131 aa12.04□□□□□ -0.48
CACNA2D3-201ENST00000288197 C19orf54Q5BKX5 351 aa12.04□□□□□ -0.48
CACNA2D3-201ENST00000288197 APRG1Q8IVJ8 170 aa12.04□□□□□ -0.48
CACNA2D3-201ENST00000288197 DEFB112Q30KQ8 113 aa12.03□□□□□ -0.48
CACNA2D3-201ENST00000288197 Q6ZSV7 163 aa12.03□□□□□ -0.48
CACNA2D3-201ENST00000288197 OR13C6PQ8NH95 151 aa12.03□□□□□ -0.48
CACNA2D3-201ENST00000288197 COX8CQ7Z4L0 72 aa12.02□□□□□ -0.48
CACNA2D3-201ENST00000288197 PIFOQ8TCI5 191 aa12.02□□□□□ -0.48
CACNA2D3-201ENST00000288197 FBXL19-AS1Q494R0 122 aa12.02□□□□□ -0.49
CACNA2D3-201ENST00000288197 C15orf53Q8NAA6 179 aa12.02□□□□□ -0.49
CACNA2D3-201ENST00000288197 CELSR1Q9NYQ6 3014 aa12.02□□□□□ -0.49
CACNA2D3-201ENST00000288197 H3BMM0 161 aa12.02□□□□□ -0.49
CACNA2D3-201ENST00000288197 UBE2WQ96B02 151 aa12.02□□□□□ -0.49
CACNA2D3-201ENST00000288197 UBE2L6O14933 153 aa12.01□□□□□ -0.49
CACNA2D3-201ENST00000288197 GPHB5Q86YW7 130 aa12.01□□□□□ -0.49
CACNA2D3-201ENST00000288197 SLC25A29Q8N8R3 303 aa12.01□□□□□ -0.49
CACNA2D3-201ENST00000288197 CARD19Q96LW7 228 aa12.01□□□□□ -0.49
CACNA2D3-201ENST00000288197 RHODO00212 210 aa12□□□□□ -0.49
CACNA2D3-201ENST00000288197 IGHV3-30-3P0DP02 117 aa12□□□□□ -0.49
CACNA2D3-201ENST00000288197 PRIMA1Q86XR5 153 aa12□□□□□ -0.49
CACNA2D3-201ENST00000288197 LINC01620Q4KN68 170 aa12□□□□□ -0.49
CACNA2D3-201ENST00000288197 PSMG3-AS1Q96PY0 264 aa12□□□□□ -0.49
CACNA2D3-201ENST00000288197 ITPR1Q14643 2758 aa12□□□□□ -0.49
CACNA2D3-201ENST00000288197 PRSS47A8MTI9 375 aa12□□□□□ -0.49
CACNA2D3-201ENST00000288197 SLURP1P55000 103 aa12□□□□□ -0.49
CACNA2D3-201ENST00000288197 HOXD3P31249 432 aaPredicted RBP11.99□□□□□ -0.49
CACNA2D3-201ENST00000288197 B4DSR2 109 aa11.99□□□□□ -0.49
CACNA2D3-201ENST00000288197 LEPROTO15243 131 aa11.99□□□□□ -0.49
CACNA2D3-201ENST00000288197 IGHV3-30P01768 117 aa11.99□□□□□ -0.49
CACNA2D3-201ENST00000288197 CRYGDP07320 174 aa11.99□□□□□ -0.49
CACNA2D3-201ENST00000288197 IGHV3-30-5P0DP03 117 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms