RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 LINC00482Q8N8I6 264 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 TMEM243Q9BU79 118 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 ZZEF1O43149 2961 aa6.89□□□□□ -1.31
PDGFC-201ENST00000274071 SMG1Q96Q15 3661 aaKnown RBP6.89□□□□□ -1.31
PDGFC-201ENST00000274071 GFRALQ6UXV0 394 aa6.88□□□□□ -1.31
PDGFC-201ENST00000274071 DMXL2Q8TDJ6 3036 aa6.88□□□□□ -1.31
PDGFC-201ENST00000274071 MAP1BP46821 2468 aaKnown RBP6.88□□□□□ -1.31
PDGFC-201ENST00000274071 ATMQ13315 3056 aa6.88□□□□□ -1.31
PDGFC-201ENST00000274071 M0R1W7 72 aa6.88□□□□□ -1.31
PDGFC-201ENST00000274071 NBR2O15453 112 aa6.88□□□□□ -1.31
PDGFC-201ENST00000274071 TMEM61Q8N0U2 210 aa6.88□□□□□ -1.31
PDGFC-201ENST00000274071 CNEP1R1Q8N9A8 125 aa6.88□□□□□ -1.31
PDGFC-201ENST00000274071 A0A1W2PRX2 142 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 TEX22C9J3V5 150 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 LYZL6O75951 148 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 IGHV1-2P23083 117 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 TMEM141Q96I45 108 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 CEP295Q9C0D2 2601 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 BSNQ9UPA5 3926 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 IGHV3-72A0A0B4J1Y9 119 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 LHBP01229 141 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 BAALC-AS2P0C853 105 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 GPHB5Q86YW7 130 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 DEFB108BQ8NET1 73 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 SMAD5-AS1Q9Y6J3 95 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 K7EIM0 57 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 TIMM17AQ99595 171 aa6.87□□□□□ -1.31
PDGFC-201ENST00000274071 CCL13Q99616 98 aa6.86□□□□□ -1.31
PDGFC-201ENST00000274071 CSMD1Q96PZ7 3565 aa6.86□□□□□ -1.31
PDGFC-201ENST00000274071 M0R381 172 aa6.86□□□□□ -1.31
PDGFC-201ENST00000274071 BEAN1Q3B7T3 259 aa6.86□□□□□ -1.31
PDGFC-201ENST00000274071 C9orf106Q8NAJ2 232 aa6.86□□□□□ -1.31
PDGFC-201ENST00000274071 RNF7Q9UBF6 113 aa6.86□□□□□ -1.31
PDGFC-201ENST00000274071 S4R3C0 116 aa6.86□□□□□ -1.31
PDGFC-201ENST00000274071 SMIM26A0A096LP01 95 aa6.85□□□□□ -1.31
PDGFC-201ENST00000274071 INAFM2P0DMQ5 153 aa6.85□□□□□ -1.31
PDGFC-201ENST00000274071 RNF182Q8N6D2 247 aa6.85□□□□□ -1.31
PDGFC-201ENST00000274071 OPRPNQ99935 248 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-201ENST00000274071 CACNA1GO43497 2377 aa6.85□□□□□ -1.31
PDGFC-201ENST00000274071 RP1L1Q8IWN7 2480 aaPredicted RBP6.85□□□□□ -1.31
PDGFC-201ENST00000274071 ARHGAP32A7KAX9 2087 aa6.85□□□□□ -1.31
PDGFC-201ENST00000274071 NXPH4O95158 308 aa6.85□□□□□ -1.31
PDGFC-201ENST00000274071 TMEM30BQ3MIR4 351 aa6.85□□□□□ -1.31
PDGFC-201ENST00000274071 Q6JHZ5 121 aa6.85□□□□□ -1.31
PDGFC-201ENST00000274071 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
PDGFC-201ENST00000274071 MGPP08493 103 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 CCL3L1P16619 93 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 RNASE6Q93091 150 aaKnown RBP6.84□□□□□ -1.31
PDGFC-201ENST00000274071 GAFA1Q96PS6 74 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 ANKRD11Q6UB99 2663 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-201ENST00000274071 MALRD1Q5VYJ5 2156 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 RAI1Q7Z5J4 1906 aaPredicted RBP6.84□□□□□ -1.31
PDGFC-201ENST00000274071 COX7A2LO14548 114 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 IGHV3-30-3P0DP02 117 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 MIAQ16674 131 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 LYPD5Q6UWN5 251 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 DKK4Q9UBT3 224 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 UBE2D4Q9Y2X8 147 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 SLC25A15Q9Y619 301 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 CADP27708 2225 aa6.84□□□□□ -1.31
PDGFC-201ENST00000274071 H7BZZ5 65 aa6.84□□□□□ -1.32
PDGFC-201ENST00000274071 XCL1P47992 114 aa6.84□□□□□ -1.32
PDGFC-201ENST00000274071 IGFL3Q6UXB1 125 aa6.84□□□□□ -1.32
PDGFC-201ENST00000274071 C20orf173Q96LM9 149 aa6.84□□□□□ -1.32
PDGFC-201ENST00000274071 LINC00846Q9NV44 126 aa6.84□□□□□ -1.32
PDGFC-201ENST00000274071 LINC00474Q9P2X8 69 aa6.84□□□□□ -1.32
PDGFC-201ENST00000274071 XCL2Q9UBD3 114 aa6.84□□□□□ -1.32
PDGFC-201ENST00000274071 IGKV3-15P01624 115 aa6.83□□□□□ -1.32
PDGFC-201ENST00000274071 NUP37Q8NFH4 326 aa6.83□□□□□ -1.32
PDGFC-201ENST00000274071 IGHG2P01859 326 aa6.83□□□□□ -1.32
PDGFC-201ENST00000274071 MSMPQ1L6U9 139 aa6.83□□□□□ -1.32
PDGFC-201ENST00000274071 C6orf226Q5I0X4 101 aa6.83□□□□□ -1.32
PDGFC-201ENST00000274071 PIEZO2Q9H5I5 2752 aa6.82□□□□□ -1.32
PDGFC-201ENST00000274071 A0A0J9YXV3 536 aa6.82□□□□□ -1.32
PDGFC-201ENST00000274071 GHRHP01286 108 aa6.82□□□□□ -1.32
PDGFC-201ENST00000274071 FAM19A1Q7Z5A9 133 aa6.82□□□□□ -1.32
PDGFC-201ENST00000274071 KNCNA6PVL3 124 aa6.82□□□□□ -1.32
PDGFC-201ENST00000274071 POLR2KP53803 58 aaKnown RBP6.82□□□□□ -1.32
PDGFC-201ENST00000274071 Q8N2B8 174 aa6.82□□□□□ -1.32
PDGFC-201ENST00000274071 ZFAND3Q9H8U3 227 aa6.82□□□□□ -1.32
PDGFC-201ENST00000274071 RBMY1BA6NDE4 496 aaKnown RBP6.81□□□□□ -1.32
PDGFC-201ENST00000274071 RBMY1EA6NEQ0 496 aaKnown RBP6.81□□□□□ -1.32
PDGFC-201ENST00000274071 SPRY3O43610 288 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 PPP1R17O96001 155 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 RBMY1DP0C7P1 496 aaKnown RBP6.81□□□□□ -1.32
PDGFC-201ENST00000274071 RBMY1A1P0DJD3 496 aaKnown RBP6.81□□□□□ -1.32
PDGFC-201ENST00000274071 RBMY1CP0DJD4 496 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 HILS1P60008 231 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 RBMY1FQ15415 496 aaKnown RBP6.81□□□□□ -1.32
PDGFC-201ENST00000274071 FAM222AQ5U5X8 452 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 SEM1Q6ZVN7 128 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 ICE1Q9Y2F5 2266 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 SPTBN4Q9H254 2564 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 ACACAQ13085 2346 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 SS18Q15532 418 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 FANCD2OSQ96PS1 177 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 APC2O95996 2303 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 DNAL4O96015 105 aa6.81□□□□□ -1.32
PDGFC-201ENST00000274071 A0A0U1RRA0 63 aa6.8□□□□□ -1.32
PDGFC-201ENST00000274071 BUB1B-PAK6H3BSN5 160 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms