RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 IGHV3-53P01767 116 aa11.72□□□□□ -0.53
TPM1-201ENST00000267996 Q6ZSN1 163 aa11.72□□□□□ -0.53
TPM1-201ENST00000267996 IGHV3-73A0A0B4J1V6 119 aa11.71□□□□□ -0.53
TPM1-201ENST00000267996 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.53
TPM1-201ENST00000267996 SDHAF1A6NFY7 115 aa11.71□□□□□ -0.53
TPM1-201ENST00000267996 SYS1-DBNDD2H3BUS1 97 aa11.71□□□□□ -0.53
TPM1-201ENST00000267996 ORMDL2Q53FV1 153 aa11.71□□□□□ -0.53
TPM1-201ENST00000267996 MAP1LC3CQ9BXW4 147 aa11.71□□□□□ -0.53
TPM1-201ENST00000267996 DNAH3Q8TD57 4116 aa11.71□□□□□ -0.53
TPM1-201ENST00000267996 A8MZ25 164 aa11.71□□□□□ -0.54
TPM1-201ENST00000267996 SPATA12Q7Z6I5 190 aa11.71□□□□□ -0.54
TPM1-201ENST00000267996 OR4C5Q8NGB2 326 aa11.71□□□□□ -0.54
TPM1-201ENST00000267996 PET117Q6UWS5 81 aa11.7□□□□□ -0.54
TPM1-201ENST00000267996 TEX43Q6ZNM6 134 aa11.7□□□□□ -0.54
TPM1-201ENST00000267996 PKD1L1Q8TDX9 2849 aa11.7□□□□□ -0.54
TPM1-201ENST00000267996 CIDEAO60543 219 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 DEFB135Q30KP9 77 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 NEGR1Q7Z3B1 354 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 LINC00612Q8N6U2 182 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 ZNF479Q96JC4 524 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 NUDT3O95989 172 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 P0DMU3 169 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 FAM231AP0DMU4 169 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 FAM231CP0DMU5 169 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 S100A12P80511 92 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 SAMD5Q5TGI4 173 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 IFI27L1Q96BM0 104 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
TPM1-201ENST00000267996 GAGE12BA1L429 117 aa11.67□□□□□ -0.54
TPM1-201ENST00000267996 G3V4G9 280 aa11.67□□□□□ -0.54
TPM1-201ENST00000267996 GAGE7O76087 117 aa11.67□□□□□ -0.54
TPM1-201ENST00000267996 GAGE12FP0CL80 117 aa11.67□□□□□ -0.54
TPM1-201ENST00000267996 GAGE12GP0CL81 117 aa11.67□□□□□ -0.54
TPM1-201ENST00000267996 GAGE12IP0CL82 117 aa11.67□□□□□ -0.54
TPM1-201ENST00000267996 RNF183Q96D59 192 aa11.67□□□□□ -0.54
TPM1-201ENST00000267996 KIR2DL4Q99706 377 aa11.67□□□□□ -0.54
TPM1-201ENST00000267996 LINC01545Q5VT33 79 aa11.66□□□□□ -0.54
TPM1-201ENST00000267996 NEXN-AS1Q8NBZ9 246 aa11.66□□□□□ -0.54
TPM1-201ENST00000267996 TOMM6Q96B49 74 aa11.66□□□□□ -0.54
TPM1-201ENST00000267996 C18orf15Q96N68 181 aa11.66□□□□□ -0.54
TPM1-201ENST00000267996 Q9UF83 564 aa11.66□□□□□ -0.54
TPM1-201ENST00000267996 OR11H2Q8NH07 326 aa11.65□□□□□ -0.54
TPM1-201ENST00000267996 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 C20orf202A1L168 122 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 I3L3M4 83 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 ATP5LO75964 103 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 TSHBP01222 138 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 G0S2P27469 103 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 RIPPLY3P57055 190 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 RHOHQ15669 191 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 ZNF664Q8N3J9 261 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 MDFIQ99750 246 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 TNFRSF18Q9Y5U5 241 aa11.65□□□□□ -0.55
TPM1-201ENST00000267996 TRBV10-1A0A0K0K1A3 114 aa11.64□□□□□ -0.55
TPM1-201ENST00000267996 EMP1P54849 157 aa11.64□□□□□ -0.55
TPM1-201ENST00000267996 NBEAL2Q6ZNJ1 2754 aa11.63□□□□□ -0.55
TPM1-201ENST00000267996 LINC01549A6NIU2 74 aa11.63□□□□□ -0.55
TPM1-201ENST00000267996 MIFP14174 115 aa11.63□□□□□ -0.55
TPM1-201ENST00000267996 LGALS9CQ6DKI2 356 aa11.63□□□□□ -0.55
TPM1-201ENST00000267996 C2orf66Q6UXQ4 117 aa11.63□□□□□ -0.55
TPM1-201ENST00000267996 LYRM9A8MSI8 78 aa11.62□□□□□ -0.55
TPM1-201ENST00000267996 K7EQD1 137 aa11.62□□□□□ -0.55
TPM1-201ENST00000267996 Q8NAQ8 132 aa11.62□□□□□ -0.55
TPM1-201ENST00000267996 IGHV4-28A0A0C4DH34 117 aa11.62□□□□□ -0.55
TPM1-201ENST00000267996 PKIAP61925 76 aa11.62□□□□□ -0.55
TPM1-201ENST00000267996 VAMP8Q9BV40 100 aa11.62□□□□□ -0.55
TPM1-201ENST00000267996 FHL2Q14192 279 aa11.61□□□□□ -0.55
TPM1-201ENST00000267996 SLC25A29Q8N8R3 303 aa11.61□□□□□ -0.55
TPM1-201ENST00000267996 CYSLTR1Q9Y271 337 aa11.61□□□□□ -0.55
TPM1-201ENST00000267996 TRBV6-4A0A1B0GX49 114 aa11.6□□□□□ -0.55
TPM1-201ENST00000267996 PCP4L1A6NKN8 68 aa11.6□□□□□ -0.55
TPM1-201ENST00000267996 H0Y8G0 127 aa11.6□□□□□ -0.55
TPM1-201ENST00000267996 ERASQ7Z444 233 aa11.6□□□□□ -0.55
TPM1-201ENST00000267996 SCGB3A1Q96QR1 104 aa11.6□□□□□ -0.55
TPM1-201ENST00000267996 TP53TG1Q9Y2A0 90 aa11.6□□□□□ -0.55
TPM1-201ENST00000267996 TRBV7-3A0A075B6L6 115 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 TRAV9-2A0A087WT02 112 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.59□□□□□ -0.55
TPM1-201ENST00000267996 FAM222AQ5U5X8 452 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 ATOH7Q8N100 152 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 ZMAT4Q9H898 229 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 DKK2Q9UBU2 259 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 IGIPA6NJ69 53 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 DEFB130BP0DP73 79 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 DEFB130AP0DP74 79 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 C20orf203Q8NBC4 194 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 PRO1933Q9H354 126 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 PAM16Q9Y3D7 125 aa11.59□□□□□ -0.55
TPM1-201ENST00000267996 PRSS1P07477 247 aa11.58□□□□□ -0.56
TPM1-201ENST00000267996 RPL36AP83881 106 aaKnown RBP11.58□□□□□ -0.56
TPM1-201ENST00000267996 ODF1Q14990 250 aa11.58□□□□□ -0.56
TPM1-201ENST00000267996 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
TPM1-201ENST00000267996 RPL36ALQ969Q0 106 aaKnown RBP11.58□□□□□ -0.56
TPM1-201ENST00000267996 PMCHL2Q9BQD1 86 aa11.58□□□□□ -0.56
TPM1-201ENST00000267996 TRGV4A0A0C4DH28 118 aa11.57□□□□□ -0.56
TPM1-201ENST00000267996 TSTD3H0UI37 97 aa11.57□□□□□ -0.56
TPM1-201ENST00000267996 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
TPM1-201ENST00000267996 KPRPQ5T749 579 aaPredicted RBP11.57□□□□□ -0.56
TPM1-201ENST00000267996 TIMM17AQ99595 171 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms