RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 MRPS36P82909 103 aaKnown RBP13.78□□□□□ -0.2
ITGA6-201ENST00000264107 SLPIP03973 132 aa13.78□□□□□ -0.2
ITGA6-201ENST00000264107 GATA3P23771 443 aa13.78□□□□□ -0.2
ITGA6-201ENST00000264107 TIRAPP58753 221 aa13.78□□□□□ -0.2
ITGA6-201ENST00000264107 CEMP1Q6PRD7 247 aaPredicted RBP13.78□□□□□ -0.2
ITGA6-201ENST00000264107 IGLV1-44P01699 117 aa13.77□□□□□ -0.2
ITGA6-201ENST00000264107 ZNF22P17026 224 aaPredicted RBP13.77□□□□□ -0.21
ITGA6-201ENST00000264107 SEC61GP60059 68 aa13.77□□□□□ -0.21
ITGA6-201ENST00000264107 THSD7BQ9C0I4 1608 aa13.76□□□□□ -0.21
ITGA6-201ENST00000264107 Q6ZPA2 131 aa13.76□□□□□ -0.21
ITGA6-201ENST00000264107 TCF20Q9UGU0 1960 aaKnown RBP13.75□□□□□ -0.21
ITGA6-201ENST00000264107 CREBBPQ92793 2442 aa13.75□□□□□ -0.21
ITGA6-201ENST00000264107 GNLYP22749 145 aa13.75□□□□□ -0.21
ITGA6-201ENST00000264107 PMAIP1Q13794 54 aa13.75□□□□□ -0.21
ITGA6-201ENST00000264107 ZSWIM8A7E2V4 1837 aa13.75□□□□□ -0.21
ITGA6-201ENST00000264107 GPR179Q6PRD1 2367 aa13.75□□□□□ -0.21
ITGA6-201ENST00000264107 LINC00308Q8TCZ7 52 aa13.75□□□□□ -0.21
ITGA6-201ENST00000264107 A6NED7 52 aa13.74□□□□□ -0.21
ITGA6-201ENST00000264107 NOP10Q9NPE3 64 aaKnown RBP13.74□□□□□ -0.21
ITGA6-201ENST00000264107 UBE2BP63146 152 aa13.74□□□□□ -0.21
ITGA6-201ENST00000264107 DIRC1Q969H9 104 aa13.74□□□□□ -0.21
ITGA6-201ENST00000264107 ETDCA0A1B0GVM5 59 aa13.74□□□□□ -0.21
ITGA6-201ENST00000264107 IGLV2-23P01705 113 aa13.74□□□□□ -0.21
ITGA6-201ENST00000264107 ACACAQ13085 2346 aa13.74□□□□□ -0.21
ITGA6-201ENST00000264107 K7EQD1 137 aa13.73□□□□□ -0.21
ITGA6-201ENST00000264107 TANC1Q9C0D5 1861 aa13.73□□□□□ -0.21
ITGA6-201ENST00000264107 Q6JHZ5 121 aa13.73□□□□□ -0.21
ITGA6-201ENST00000264107 RNF185Q96GF1 192 aa13.73□□□□□ -0.21
ITGA6-201ENST00000264107 TMEM263Q8WUH6 116 aaKnown RBP13.73□□□□□ -0.21
ITGA6-201ENST00000264107 NDUFB1O75438 58 aa13.72□□□□□ -0.21
ITGA6-201ENST00000264107 BPESC1Q9GZL8 116 aa13.72□□□□□ -0.21
ITGA6-201ENST00000264107 KAAG1Q9UBP8 84 aa13.72□□□□□ -0.21
ITGA6-201ENST00000264107 BRWD1-AS2P59051 145 aa13.72□□□□□ -0.21
ITGA6-201ENST00000264107 SOSTDC1Q6X4U4 206 aa13.72□□□□□ -0.21
ITGA6-201ENST00000264107 LYRM9A8MSI8 78 aa13.72□□□□□ -0.21
ITGA6-201ENST00000264107 PRO0628Q9UI54 55 aa13.72□□□□□ -0.21
ITGA6-201ENST00000264107 PSCAO43653 123 aa13.72□□□□□ -0.21
ITGA6-201ENST00000264107 CDIP1Q9H305 208 aa13.71□□□□□ -0.21
ITGA6-201ENST00000264107 PRSS33Q8NF86 280 aa13.71□□□□□ -0.22
ITGA6-201ENST00000264107 URB1-AS1Q96HZ7 61 aa13.71□□□□□ -0.22
ITGA6-201ENST00000264107 SPRNQ5BIV9 151 aa13.7□□□□□ -0.22
ITGA6-201ENST00000264107 Q6ZS46 218 aa13.7□□□□□ -0.22
ITGA6-201ENST00000264107 PLXNA2O75051 1894 aa13.7□□□□□ -0.22
ITGA6-201ENST00000264107 SPTAN1Q13813 2472 aaKnown RBP13.7□□□□□ -0.22
ITGA6-201ENST00000264107 LHBP01229 141 aa13.7□□□□□ -0.22
ITGA6-201ENST00000264107 CTSZQ9UBR2 303 aa13.7□□□□□ -0.22
ITGA6-201ENST00000264107 FRMPD3Q5JV73 1810 aa13.7□□□□□ -0.22
ITGA6-201ENST00000264107 B4DSR2 109 aa13.7□□□□□ -0.22
ITGA6-201ENST00000264107 IGLV10-54A0A075B6I4 117 aa13.7□□□□□ -0.22
ITGA6-201ENST00000264107 CRIP1P50238 77 aa13.7□□□□□ -0.22
ITGA6-201ENST00000264107 TRBV27A0A0K0K1C4 114 aa13.69□□□□□ -0.22
ITGA6-201ENST00000264107 THADAQ6YHU6 1953 aa13.69□□□□□ -0.22
ITGA6-201ENST00000264107 NPBQ8NG41 125 aa13.69□□□□□ -0.22
ITGA6-201ENST00000264107 CRIP2P52943 208 aaPredicted RBP13.68□□□□□ -0.22
ITGA6-201ENST00000264107 FAM19A3Q7Z5A8 133 aa13.68□□□□□ -0.22
ITGA6-201ENST00000264107 DEFB1P60022 68 aa13.68□□□□□ -0.22
ITGA6-201ENST00000264107 COL4A6Q14031 1691 aa13.68□□□□□ -0.22
ITGA6-201ENST00000264107 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
ITGA6-201ENST00000264107 CDKN2A-AS1Q9UH64 79 aa13.67□□□□□ -0.22
ITGA6-201ENST00000264107 USF3Q68DE3 2245 aa13.67□□□□□ -0.22
ITGA6-201ENST00000264107 IGHV7-81A0A0B4J1V7 117 aa13.67□□□□□ -0.22
ITGA6-201ENST00000264107 H3BUA1 57 aa13.66□□□□□ -0.22
ITGA6-201ENST00000264107 MIFP14174 115 aa13.66□□□□□ -0.22
ITGA6-201ENST00000264107 HHLA3Q9XRX5 114 aa13.66□□□□□ -0.22
ITGA6-201ENST00000264107 IGLV4-3A0A075B6K6 122 aa13.66□□□□□ -0.22
ITGA6-201ENST00000264107 AJUBAQ96IF1 538 aa13.65□□□□□ -0.22
ITGA6-201ENST00000264107 UBE2D3P61077 147 aa13.65□□□□□ -0.22
ITGA6-201ENST00000264107 UBE2D2P62837 147 aa13.65□□□□□ -0.22
ITGA6-201ENST00000264107 CRIP3Q6Q6R5 217 aa13.65□□□□□ -0.22
ITGA6-201ENST00000264107 CAMK2N2Q96S95 79 aa13.65□□□□□ -0.22
ITGA6-201ENST00000264107 A0A087WVE0 104 aa13.65□□□□□ -0.22
ITGA6-201ENST00000264107 COX7BP24311 80 aa13.65□□□□□ -0.23
ITGA6-201ENST00000264107 MYCNOSP40205 109 aa13.64□□□□□ -0.23
ITGA6-201ENST00000264107 NDUFA1O15239 70 aa13.64□□□□□ -0.23
ITGA6-201ENST00000264107 CACNA1HO95180 2353 aa13.64□□□□□ -0.23
ITGA6-201ENST00000264107 WT1P19544 449 aaPredicted RBP13.64□□□□□ -0.23
ITGA6-201ENST00000264107 KIAA1549Q9HCM3 1950 aa13.64□□□□□ -0.23
ITGA6-201ENST00000264107 PRR4Q16378 134 aa13.64□□□□□ -0.23
ITGA6-201ENST00000264107 TRAV7A0A075B6U4 112 aa13.63□□□□□ -0.23
ITGA6-201ENST00000264107 IGHV4OR15-8A0A075B7B6 117 aa13.63□□□□□ -0.23
ITGA6-201ENST00000264107 A0A087WW49 117 aa13.63□□□□□ -0.23
ITGA6-201ENST00000264107 PCNX2A6NKB5 2137 aa13.63□□□□□ -0.23
ITGA6-201ENST00000264107 UBE2D1P51668 147 aa13.62□□□□□ -0.23
ITGA6-201ENST00000264107 UBE2DNLQ8IWF7 75 aa13.61□□□□□ -0.23
ITGA6-201ENST00000264107 LRCOL1A6NCL2 159 aa13.61□□□□□ -0.23
ITGA6-201ENST00000264107 MALRD1Q5VYJ5 2156 aa13.61□□□□□ -0.23
ITGA6-201ENST00000264107 UBE2AP49459 152 aa13.6□□□□□ -0.23
ITGA6-201ENST00000264107 RNF138Q8WVD3 245 aa13.6□□□□□ -0.23
ITGA6-201ENST00000264107 DSCR9P59020 149 aa13.6□□□□□ -0.23
ITGA6-201ENST00000264107 MGAMO43451 1857 aa13.6□□□□□ -0.23
ITGA6-201ENST00000264107 MED12LQ86YW9 2145 aa13.6□□□□□ -0.23
ITGA6-201ENST00000264107 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.59□□□□□ -0.236e-7■■■■■ 30.1
ITGA6-201ENST00000264107 IGLV2-11P01706 119 aa13.59□□□□□ -0.23
ITGA6-201ENST00000264107 NRACQ8N912 160 aa13.59□□□□□ -0.23
ITGA6-201ENST00000264107 SP5Q6BEB4 398 aaPredicted RBP13.59□□□□□ -0.23
ITGA6-201ENST00000264107 GYPEP15421 78 aa13.58□□□□□ -0.23
ITGA6-201ENST00000264107 HOXB4P17483 251 aaPredicted RBP13.58□□□□□ -0.23
ITGA6-201ENST00000264107 EIF4EBP1Q13541 118 aaPredicted RBP13.58□□□□□ -0.23
ITGA6-201ENST00000264107 APRG1Q8IVJ8 170 aa13.58□□□□□ -0.23
ITGA6-201ENST00000264107 MED13Q9UHV7 2174 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms