RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 LEPROTO15243 131 aa12.31□□□□□ -0.44
GPC1-201ENST00000264039 LY6G5BQ8NDX9 201 aa12.31□□□□□ -0.44
GPC1-201ENST00000264039 CUL9Q8IWT3 2517 aa12.31□□□□□ -0.44
GPC1-201ENST00000264039 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
GPC1-201ENST00000264039 IGHV3-30-3P0DP02 117 aa12.31□□□□□ -0.44
GPC1-201ENST00000264039 A0A0J9YXY3 114 aa12.3□□□□□ -0.44
GPC1-201ENST00000264039 NPFFO15130 113 aa12.3□□□□□ -0.44
GPC1-201ENST00000264039 SAA4P35542 130 aa12.3□□□□□ -0.44
GPC1-201ENST00000264039 UNQ9165/PRO28630Q6UXU0 137 aa12.3□□□□□ -0.44
GPC1-201ENST00000264039 C20orf173Q96LM9 149 aa12.3□□□□□ -0.44
GPC1-201ENST00000264039 ZNF883P0CG24 379 aa12.3□□□□□ -0.44
GPC1-201ENST00000264039 RHOHQ15669 191 aa12.3□□□□□ -0.44
GPC1-201ENST00000264039 TRBV12-3P01733 135 aa12.29□□□□□ -0.44
GPC1-201ENST00000264039 HERVK_113P63121 156 aa12.29□□□□□ -0.44
GPC1-201ENST00000264039 Q6ZS92 163 aa12.29□□□□□ -0.44
GPC1-201ENST00000264039 GRNP28799 593 aaKnown RBP12.29□□□□□ -0.44
GPC1-201ENST00000264039 F8W735 103 aaPredicted RBP12.29□□□□□ -0.44
GPC1-201ENST00000264039 ODF3Q96PU9 254 aa12.29□□□□□ -0.44
GPC1-201ENST00000264039 CCDC168Q8NDH2 2452 aa12.29□□□□□ -0.44
GPC1-201ENST00000264039 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.28□□□□□ -0.44
GPC1-201ENST00000264039 IGKV2-29A2NJV5 120 aaPredicted RBP12.28□□□□□ -0.44
GPC1-201ENST00000264039 FAM110DQ8TAY7 271 aaPredicted RBP12.28□□□□□ -0.44
GPC1-201ENST00000264039 IGLV4-69A0A075B6H9 119 aa12.28□□□□□ -0.44
GPC1-201ENST00000264039 P0DMU3 169 aa12.28□□□□□ -0.44
GPC1-201ENST00000264039 FAM231AP0DMU4 169 aa12.28□□□□□ -0.44
GPC1-201ENST00000264039 FAM231CP0DMU5 169 aa12.28□□□□□ -0.44
GPC1-201ENST00000264039 IGHV1-69DA0A0B4J2H0 117 aa12.28□□□□□ -0.44
GPC1-201ENST00000264039 H7C423 109 aa12.28□□□□□ -0.44
GPC1-201ENST00000264039 CRYGDP07320 174 aa12.28□□□□□ -0.44
GPC1-201ENST00000264039 PRIMA1Q86XR5 153 aa12.28□□□□□ -0.44
GPC1-201ENST00000264039 MDFICQ9P1T7 246 aa12.28□□□□□ -0.44
GPC1-201ENST00000264039 DMDP11532 3685 aa12.28□□□□□ -0.44
GPC1-201ENST00000264039 BAALC-AS2P0C853 105 aa12.27□□□□□ -0.44
GPC1-201ENST00000264039 C9orf47Q6ZRZ4 202 aa12.27□□□□□ -0.44
GPC1-201ENST00000264039 TMEM263Q8WUH6 116 aaKnown RBP12.27□□□□□ -0.44
GPC1-201ENST00000264039 TMEM126AQ9H061 195 aa12.27□□□□□ -0.44
GPC1-201ENST00000264039 Q9HAA7 133 aa12.27□□□□□ -0.44
GPC1-201ENST00000264039 JMJD1CQ15652 2540 aa12.27□□□□□ -0.45
GPC1-201ENST00000264039 TINCRA0A1B0GVN0 87 aa12.27□□□□□ -0.45
GPC1-201ENST00000264039 hADV29S1A0JD25 119 aa12.27□□□□□ -0.45
GPC1-201ENST00000264039 VPREB3Q9UKI3 123 aa12.27□□□□□ -0.45
GPC1-201ENST00000264039 PCSK5Q92824 1860 aa12.27□□□□□ -0.45
GPC1-201ENST00000264039 I3L3M4 83 aa12.27□□□□□ -0.45
GPC1-201ENST00000264039 CENPVL3A0A0U1RRI6 287 aa12.26□□□□□ -0.45
GPC1-201ENST00000264039 NXPH4O95158 308 aa12.26□□□□□ -0.45
GPC1-201ENST00000264039 CCDC140Q96MF4 163 aa12.26□□□□□ -0.45
GPC1-201ENST00000264039 TNRC18O15417 2968 aaPredicted RBP12.26□□□□□ -0.45
GPC1-201ENST00000264039 CLPSL1A2RUU4 121 aa12.26□□□□□ -0.45
GPC1-201ENST00000264039 TRBV7-1A0A0A6YYK4 115 aa12.25□□□□□ -0.45
GPC1-201ENST00000264039 COX6B1P14854 86 aa12.25□□□□□ -0.45
GPC1-201ENST00000264039 NSUN5P1Q3KNT7 163 aa12.25□□□□□ -0.45
GPC1-201ENST00000264039 LINC01619G3V211 115 aa12.25□□□□□ -0.45
GPC1-201ENST00000264039 Q8N9W7 124 aa12.25□□□□□ -0.45
GPC1-201ENST00000264039 ZFAND2AQ8N6M9 145 aa12.25□□□□□ -0.45
GPC1-201ENST00000264039 ZZEF1O43149 2961 aa12.24□□□□□ -0.45
GPC1-201ENST00000264039 TSHBP01222 138 aa12.24□□□□□ -0.45
GPC1-201ENST00000264039 NPBQ8NG41 125 aa12.24□□□□□ -0.45
GPC1-201ENST00000264039 A0A0B4J2C4 111 aa12.24□□□□□ -0.45
GPC1-201ENST00000264039 A0A1B0GX51 115 aa12.24□□□□□ -0.45
GPC1-201ENST00000264039 SNRPD3P62318 126 aaKnown RBP12.24□□□□□ -0.45
GPC1-201ENST00000264039 C19orf54Q5BKX5 351 aa12.24□□□□□ -0.45
GPC1-201ENST00000264039 TIMM17AQ99595 171 aa12.24□□□□□ -0.45
GPC1-201ENST00000264039 TRACP01848 142 aa12.24□□□□□ -0.45
GPC1-201ENST00000264039 SRSF2Q01130 221 aaKnown RBP12.24□□□□□ -0.45
GPC1-201ENST00000264039 SDIM1Q6ZPB5 146 aa12.24□□□□□ -0.45
GPC1-201ENST00000264039 C11orf68Q9H3H3 251 aaKnown RBP12.24□□□□□ -0.45
GPC1-201ENST00000264039 Q9H8V8 135 aa12.24□□□□□ -0.45
GPC1-201ENST00000264039 ZFAND3Q9H8U3 227 aa12.23□□□□□ -0.45
GPC1-201ENST00000264039 H3BT86 120 aa12.23□□□□□ -0.45
GPC1-201ENST00000264039 IGIPA6NJ69 53 aa12.22□□□□□ -0.45
GPC1-201ENST00000264039 RNASE3P12724 160 aaKnown RBP12.22□□□□□ -0.45
GPC1-201ENST00000264039 SPANXA1Q9NS26 97 aa12.22□□□□□ -0.45
GPC1-201ENST00000264039 MUC3AQ02505 3323 aa12.22□□□□□ -0.45
GPC1-201ENST00000264039 J3KT08 172 aa12.22□□□□□ -0.45
GPC1-201ENST00000264039 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.45
GPC1-201ENST00000264039 TMEM223A0PJW6 202 aa12.21□□□□□ -0.45
GPC1-201ENST00000264039 IGHV3-53P01767 116 aa12.21□□□□□ -0.45
GPC1-201ENST00000264039 DAZ2Q13117 558 aaKnown RBP12.21□□□□□ -0.45
GPC1-201ENST00000264039 MINOS1Q5TGZ0 78 aa12.21□□□□□ -0.45
GPC1-201ENST00000264039 DAZ4Q86SG3 579 aaKnown RBP12.21□□□□□ -0.45
GPC1-201ENST00000264039 DAZ1Q9NQZ3 744 aaKnown RBP12.21□□□□□ -0.45
GPC1-201ENST00000264039 DAZ3Q9NR90 486 aaKnown RBP12.21□□□□□ -0.45
GPC1-201ENST00000264039 LRBAP50851 2863 aa12.21□□□□□ -0.46
GPC1-201ENST00000264039 NDUFA7O95182 113 aa12.21□□□□□ -0.46
GPC1-201ENST00000264039 CSMD1Q96PZ7 3565 aa12.2□□□□□ -0.46
GPC1-201ENST00000264039 ADAMTSL4-AS1Q5T5F5 129 aa12.2□□□□□ -0.46
GPC1-201ENST00000264039 C20orf203Q8NBC4 194 aa12.2□□□□□ -0.46
GPC1-201ENST00000264039 CHD8Q9HCK8 2581 aa12.19□□□□□ -0.46
GPC1-201ENST00000264039 LINC00158P58513 81 aa12.19□□□□□ -0.46
GPC1-201ENST00000264039 MYO18BQ8IUG5 2567 aa12.19□□□□□ -0.46
GPC1-201ENST00000264039 TRBV30A0A0K0K1B3 111 aa12.19□□□□□ -0.46
GPC1-201ENST00000264039 PRM2P04554 102 aa12.19□□□□□ -0.46
GPC1-201ENST00000264039 GPHB5Q86YW7 130 aa12.19□□□□□ -0.46
GPC1-201ENST00000264039 MUC6Q6W4X9 2439 aa12.19□□□□□ -0.46
GPC1-201ENST00000264039 PROK1P58294 105 aa12.19□□□□□ -0.46
GPC1-201ENST00000264039 C3orf22Q8N5N4 141 aa12.19□□□□□ -0.46
GPC1-201ENST00000264039 PEMTQ9UBM1 199 aa12.19□□□□□ -0.46
GPC1-201ENST00000264039 PRO3102Q9H379 93 aa12.18□□□□□ -0.46
GPC1-201ENST00000264039 LY6LH3BQJ8 138 aa12.18□□□□□ -0.46
GPC1-201ENST00000264039 SMG1Q96Q15 3661 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms