RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 RIPPLY3P57055 190 aa16.33■□□□□ 0.2
SMARCB1-201ENST00000263121 NIT2Q9NQR4 276 aa16.33■□□□□ 0.2
SMARCB1-201ENST00000263121 A0A096LNJ9 63 aa16.32■□□□□ 0.2
SMARCB1-201ENST00000263121 POLR2KP53803 58 aaKnown RBP16.32■□□□□ 0.2
SMARCB1-201ENST00000263121 Q8NAQ8 132 aa16.32■□□□□ 0.2
SMARCB1-201ENST00000263121 IGHV4-28A0A0C4DH34 117 aa16.31■□□□□ 0.2
SMARCB1-201ENST00000263121 TMEM70Q9BUB7 260 aa16.31■□□□□ 0.2
SMARCB1-201ENST00000263121 TP53TG1Q9Y2A0 90 aa16.31■□□□□ 0.2
SMARCB1-201ENST00000263121 TRGV2A0A075B6R0 118 aa16.3■□□□□ 0.2
SMARCB1-201ENST00000263121 C18orf15Q96N68 181 aa16.3■□□□□ 0.2
SMARCB1-201ENST00000263121 SDHAF1A6NFY7 115 aa16.29■□□□□ 0.2
SMARCB1-201ENST00000263121 CIDEAO60543 219 aa16.29■□□□□ 0.2
SMARCB1-201ENST00000263121 P0DMU3 169 aa16.29■□□□□ 0.2
SMARCB1-201ENST00000263121 FAM231AP0DMU4 169 aa16.29■□□□□ 0.2
SMARCB1-201ENST00000263121 FAM231CP0DMU5 169 aa16.29■□□□□ 0.2
SMARCB1-201ENST00000263121 LYRM9A8MSI8 78 aa16.28■□□□□ 0.2
SMARCB1-201ENST00000263121 PYY3Q5JQD4 70 aa16.28■□□□□ 0.2
SMARCB1-201ENST00000263121 TRBV27A0A0K0K1C4 114 aa16.27■□□□□ 0.2
SMARCB1-201ENST00000263121 K7EMI3 77 aa16.27■□□□□ 0.2
SMARCB1-201ENST00000263121 TCAPO15273 167 aa16.27■□□□□ 0.2
SMARCB1-201ENST00000263121 SMIM6P0DI80 62 aa16.27■□□□□ 0.2
SMARCB1-201ENST00000263121 LAGE3Q14657 143 aa16.27■□□□□ 0.2
SMARCB1-201ENST00000263121 VCYO14598 125 aa16.27■□□□□ 0.19
SMARCB1-201ENST00000263121 LEPROTL1O95214 131 aa16.27■□□□□ 0.19
SMARCB1-201ENST00000263121 HBDP02042 147 aa16.27■□□□□ 0.19
SMARCB1-201ENST00000263121 PRB2P02812 416 aaPredicted RBP16.27■□□□□ 0.19
SMARCB1-201ENST00000263121 K7EIL1 84 aa16.26■□□□□ 0.19
SMARCB1-201ENST00000263121 FCER1GP30273 86 aa16.26■□□□□ 0.19
SMARCB1-201ENST00000263121 FAM222AQ5U5X8 452 aa16.26■□□□□ 0.19
SMARCB1-201ENST00000263121 NEGR1Q7Z3B1 354 aa16.26■□□□□ 0.19
SMARCB1-201ENST00000263121 NEXN-AS1Q8NBZ9 246 aa16.26■□□□□ 0.19
SMARCB1-201ENST00000263121 DKK2Q9UBU2 259 aa16.26■□□□□ 0.19
SMARCB1-201ENST00000263121 Q9UF83 564 aa16.26■□□□□ 0.19
SMARCB1-201ENST00000263121 DEFB4AO15263 64 aa16.25■□□□□ 0.19
SMARCB1-201ENST00000263121 JOSD1Q15040 202 aaPredicted RBP16.25■□□□□ 0.19
SMARCB1-201ENST00000263121 DEFB130BP0DP73 79 aa16.24■□□□□ 0.19
SMARCB1-201ENST00000263121 DEFB130AP0DP74 79 aa16.24■□□□□ 0.19
SMARCB1-201ENST00000263121 LINC00173Q6ZV60 143 aa16.24■□□□□ 0.19
SMARCB1-201ENST00000263121 LINC00518Q8N0U6 118 aa16.24■□□□□ 0.19
SMARCB1-201ENST00000263121 DNAJC30Q96LL9 226 aa16.24■□□□□ 0.19
SMARCB1-201ENST00000263121 RETNQ9HD89 108 aa16.24■□□□□ 0.19
SMARCB1-201ENST00000263121 NBEAL2Q6ZNJ1 2754 aa16.24■□□□□ 0.19
SMARCB1-201ENST00000263121 ORMDL2Q53FV1 153 aa16.24■□□□□ 0.19
SMARCB1-201ENST00000263121 K7EQD1 137 aa16.23■□□□□ 0.19
SMARCB1-201ENST00000263121 C3orf79P0CE67 100 aa16.23■□□□□ 0.19
SMARCB1-201ENST00000263121 HSPB8Q9UJY1 196 aa16.23■□□□□ 0.19
SMARCB1-201ENST00000263121 TNFRSF18Q9Y5U5 241 aa16.23■□□□□ 0.19
SMARCB1-201ENST00000263121 KRTDAPP60985 99 aa16.22■□□□□ 0.19
SMARCB1-201ENST00000263121 FHL2Q14192 279 aa16.22■□□□□ 0.19
SMARCB1-201ENST00000263121 SLC25A29Q8N8R3 303 aa16.22■□□□□ 0.19
SMARCB1-201ENST00000263121 KIR2DL4Q99706 377 aa16.22■□□□□ 0.19
SMARCB1-201ENST00000263121 TRBV10-1A0A0K0K1A3 114 aa16.21■□□□□ 0.19
SMARCB1-201ENST00000263121 TRBV6-4A0A1B0GX49 114 aa16.2■□□□□ 0.18
SMARCB1-201ENST00000263121 I3L3M4 83 aa16.2■□□□□ 0.18
SMARCB1-201ENST00000263121 NUDT3O95989 172 aa16.2■□□□□ 0.18
SMARCB1-201ENST00000263121 CELA1Q9UNI1 258 aa16.2■□□□□ 0.18
SMARCB1-201ENST00000263121 TRGV4A0A0C4DH28 118 aa16.19■□□□□ 0.18
SMARCB1-201ENST00000263121 KRTAP21-3Q3LHN1 58 aa16.19■□□□□ 0.18
SMARCB1-201ENST00000263121 C12orf57Q99622 126 aa16.19■□□□□ 0.18
SMARCB1-201ENST00000263121 NOTCH1P46531 2555 aa16.19■□□□□ 0.18
SMARCB1-201ENST00000263121 TSHBP01222 138 aa16.18■□□□□ 0.18
SMARCB1-201ENST00000263121 BTF3P20290 206 aaKnown RBP16.18■□□□□ 0.18
SMARCB1-201ENST00000263121 SBSPONQ8IVN8 264 aa16.18■□□□□ 0.18
SMARCB1-201ENST00000263121 SPART-AS1P0CW21 52 aa16.18■□□□□ 0.18
SMARCB1-201ENST00000263121 Q8N976 141 aa16.18■□□□□ 0.18
SMARCB1-201ENST00000263121 DEFB104AQ8WTQ1 72 aa16.17■□□□□ 0.18
SMARCB1-201ENST00000263121 NBEAL1Q6ZS30 2694 aa16.16■□□□□ 0.18
SMARCB1-201ENST00000263121 TRBV7-3A0A075B6L6 115 aa16.16■□□□□ 0.18
SMARCB1-201ENST00000263121 SCGB1D1O95968 90 aa16.16■□□□□ 0.18
SMARCB1-201ENST00000263121 DAD1P61803 113 aa16.16■□□□□ 0.18
SMARCB1-201ENST00000263121 RHOHQ15669 191 aa16.16■□□□□ 0.18
SMARCB1-201ENST00000263121 CDPF1Q6NVV7 123 aa16.16■□□□□ 0.18
SMARCB1-201ENST00000263121 TOMM6Q96B49 74 aa16.16■□□□□ 0.18
SMARCB1-201ENST00000263121 MAP1LC3CQ9BXW4 147 aa16.16■□□□□ 0.18
SMARCB1-201ENST00000263121 MGAM2Q2M2H8 2515 aa16.15■□□□□ 0.18
SMARCB1-201ENST00000263121 SYS1-DBNDD2H3BUS1 97 aa16.15■□□□□ 0.18
SMARCB1-201ENST00000263121 RPL36AP83881 106 aaKnown RBP16.15■□□□□ 0.18
SMARCB1-201ENST00000263121 ZNRF2Q8NHG8 242 aa16.15■□□□□ 0.18
SMARCB1-201ENST00000263121 RPL36ALQ969Q0 106 aaKnown RBP16.15■□□□□ 0.18
SMARCB1-201ENST00000263121 C11orf68Q9H3H3 251 aaKnown RBP16.15■□□□□ 0.18
SMARCB1-201ENST00000263121 TEX48A0A1B0GUV7 120 aa16.14■□□□□ 0.18
SMARCB1-201ENST00000263121 DEFB121Q5J5C9 76 aa16.14■□□□□ 0.17
SMARCB1-201ENST00000263121 C2orf66Q6UXQ4 117 aa16.14■□□□□ 0.17
SMARCB1-201ENST00000263121 SPATA12Q7Z6I5 190 aa16.14■□□□□ 0.17
SMARCB1-201ENST00000263121 IFI27L1Q96BM0 104 aa16.14■□□□□ 0.17
SMARCB1-201ENST00000263121 G0S2P27469 103 aa16.13■□□□□ 0.17
SMARCB1-201ENST00000263121 UBE2D3P61077 147 aa16.13■□□□□ 0.17
SMARCB1-201ENST00000263121 UBE2D2P62837 147 aa16.13■□□□□ 0.17
SMARCB1-201ENST00000263121 TM2D3Q9BRN9 247 aa16.13■□□□□ 0.17
SMARCB1-201ENST00000263121 HHLA3Q9XRX5 114 aa16.13■□□□□ 0.17
SMARCB1-201ENST00000263121 PRADC1Q9BSG0 188 aa16.12■□□□□ 0.17
SMARCB1-201ENST00000263121 LOC100131303A0A0U1RQF7 123 aa16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 GAGE12JA6NER3 117 aa16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 GAGE1Q13065 139 aa16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 GAGE4Q13068 117 aa16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 GAGE5Q13069 117 aa16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 GAGE13Q4V321 117 aa16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 PET117Q6UWS5 81 aa16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 PHLDA1Q8WV24 401 aaPredicted RBP16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 SPATA25Q9BR10 227 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms