RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 IGHV3-33P01772 117 aa10.79□□□□□ -0.68
SCARF1-201ENST00000263071 PYGO1Q9Y3Y4 419 aa10.79□□□□□ -0.68
SCARF1-201ENST00000263071 F5H697 171 aa10.78□□□□□ -0.68
SCARF1-201ENST00000263071 BRD3OSQ6XYD6 125 aa10.78□□□□□ -0.68
SCARF1-201ENST00000263071 KAAG1Q9UBP8 84 aa10.78□□□□□ -0.68
SCARF1-201ENST00000263071 ATP6V0E1O15342 81 aa10.78□□□□□ -0.68
SCARF1-201ENST00000263071 COX6CP09669 75 aa10.78□□□□□ -0.68
SCARF1-201ENST00000263071 C14orf178Q8N769 122 aaPredicted RBP10.78□□□□□ -0.68
SCARF1-201ENST00000263071 C10orf105Q8TEF2 133 aa10.78□□□□□ -0.68
SCARF1-201ENST00000263071 METTL26Q96S19 204 aa10.78□□□□□ -0.68
SCARF1-201ENST00000263071 SMAD5-AS1Q9Y6J3 95 aa10.78□□□□□ -0.68
SCARF1-201ENST00000263071 HRNRQ86YZ3 2850 aaPredicted RBP10.78□□□□□ -0.68
SCARF1-201ENST00000263071 ATOX1O00244 68 aa10.77□□□□□ -0.69
SCARF1-201ENST00000263071 IGHV3-30P01768 117 aa10.77□□□□□ -0.69
SCARF1-201ENST00000263071 P0DMU3 169 aa10.77□□□□□ -0.69
SCARF1-201ENST00000263071 FAM231AP0DMU4 169 aa10.77□□□□□ -0.69
SCARF1-201ENST00000263071 FAM231CP0DMU5 169 aa10.77□□□□□ -0.69
SCARF1-201ENST00000263071 IGHV3-30-5P0DP03 117 aa10.77□□□□□ -0.69
SCARF1-201ENST00000263071 EEF1AKMT3Q96AZ1 226 aa10.77□□□□□ -0.69
SCARF1-201ENST00000263071 AGPAT4-IT1Q9H0P7 198 aa10.77□□□□□ -0.69
SCARF1-201ENST00000263071 Q6ZS46 218 aa10.77□□□□□ -0.69
SCARF1-201ENST00000263071 C8orf31Q8N9H6 132 aa10.77□□□□□ -0.69
SCARF1-201ENST00000263071 ELANEP08246 267 aa10.76□□□□□ -0.69
SCARF1-201ENST00000263071 PFN2P35080 140 aa10.76□□□□□ -0.69
SCARF1-201ENST00000263071 NSUN5P1Q3KNT7 163 aa10.76□□□□□ -0.69
SCARF1-201ENST00000263071 FAM74A4Q5TZK3 123 aa10.76□□□□□ -0.69
SCARF1-201ENST00000263071 Q5XG85 94 aa10.76□□□□□ -0.69
SCARF1-201ENST00000263071 LINC00643Q86TS7 51 aa10.76□□□□□ -0.69
SCARF1-201ENST00000263071 RNF185Q96GF1 192 aa10.76□□□□□ -0.69
SCARF1-201ENST00000263071 TRAV12-1A0A0B4J245 112 aa10.76□□□□□ -0.69
SCARF1-201ENST00000263071 RS1O15537 224 aa10.76□□□□□ -0.69
SCARF1-201ENST00000263071 C11orf21Q9P2W6 132 aa10.76□□□□□ -0.69
SCARF1-201ENST00000263071 CRYGDP07320 174 aa10.75□□□□□ -0.69
SCARF1-201ENST00000263071 ZFP36P26651 326 aaKnown RBP10.75□□□□□ -0.69
SCARF1-201ENST00000263071 VPS13CQ709C8 3753 aa10.75□□□□□ -0.69
SCARF1-201ENST00000263071 IGLV11-55A0A075B6I3 123 aa10.75□□□□□ -0.69
SCARF1-201ENST00000263071 FAM19A4Q96LR4 140 aa10.75□□□□□ -0.69
SCARF1-201ENST00000263071 IGHV3-64A0A075B6Q5 118 aa10.75□□□□□ -0.69
SCARF1-201ENST00000263071 H3BT86 120 aa10.75□□□□□ -0.69
SCARF1-201ENST00000263071 LINC00336Q6ZUF6 198 aa10.75□□□□□ -0.69
SCARF1-201ENST00000263071 ACYP1P07311 99 aa10.74□□□□□ -0.69
SCARF1-201ENST00000263071 RNASE4P34096 147 aaKnown RBP10.74□□□□□ -0.69
SCARF1-201ENST00000263071 RPL39LQ96EH5 51 aaKnown RBP10.74□□□□□ -0.69
SCARF1-201ENST00000263071 H7C423 109 aa10.74□□□□□ -0.69
SCARF1-201ENST00000263071 IGKV3D-20A0A0C4DH25 116 aa10.74□□□□□ -0.69
SCARF1-201ENST00000263071 OXTP01178 125 aa10.74□□□□□ -0.69
SCARF1-201ENST00000263071 LYPD1Q8N2G4 141 aa10.74□□□□□ -0.69
SCARF1-201ENST00000263071 IGHV7-81A0A0B4J1V7 117 aa10.73□□□□□ -0.69
SCARF1-201ENST00000263071 F8W735 103 aaPredicted RBP10.73□□□□□ -0.69
SCARF1-201ENST00000263071 LGALS3P17931 250 aaKnown RBP10.73□□□□□ -0.69
SCARF1-201ENST00000263071 PHLDA3Q9Y5J5 127 aa10.73□□□□□ -0.69
SCARF1-201ENST00000263071 CRYBG3Q68DQ2 2970 aa10.73□□□□□ -0.69
SCARF1-201ENST00000263071 ABCA12Q86UK0 2595 aa10.73□□□□□ -0.69
SCARF1-201ENST00000263071 TRAV8-3A0A0A6YYJ7 113 aa10.73□□□□□ -0.69
SCARF1-201ENST00000263071 FAM236DA0A1B0GTK5 79 aa10.73□□□□□ -0.69
SCARF1-201ENST00000263071 FAM236CP0DP71 79 aa10.73□□□□□ -0.69
SCARF1-201ENST00000263071 SLC25A29Q8N8R3 303 aa10.73□□□□□ -0.69
SCARF1-201ENST00000263071 SAA4P35542 130 aa10.72□□□□□ -0.69
SCARF1-201ENST00000263071 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.72□□□□□ -0.69
SCARF1-201ENST00000263071 TRBV6-1A0A0K0K1D8 114 aa10.72□□□□□ -0.69
SCARF1-201ENST00000263071 LINC01546A6NGU7 62 aa10.72□□□□□ -0.69
SCARF1-201ENST00000263071 A0A0U1RQV1 116 aa10.71□□□□□ -0.69
SCARF1-201ENST00000263071 A0A087WWL8 130 aa10.71□□□□□ -0.69
SCARF1-201ENST00000263071 TRIAP1O43715 76 aa10.71□□□□□ -0.69
SCARF1-201ENST00000263071 CYSTM1Q9H1C7 97 aa10.71□□□□□ -0.69
SCARF1-201ENST00000263071 TRBV12-3P01733 135 aa10.71□□□□□ -0.7
SCARF1-201ENST00000263071 PRSS2P07478 247 aa10.71□□□□□ -0.7
SCARF1-201ENST00000263071 PEMTQ9UBM1 199 aa10.71□□□□□ -0.7
SCARF1-201ENST00000263071 GNRH2O43555 120 aa10.7□□□□□ -0.7
SCARF1-201ENST00000263071 COX6B1P14854 86 aa10.7□□□□□ -0.7
SCARF1-201ENST00000263071 PDE6HQ13956 83 aa10.7□□□□□ -0.7
SCARF1-201ENST00000263071 LRRK2Q5S007 2527 aa10.7□□□□□ -0.7
SCARF1-201ENST00000263071 J3QQQ9 107 aa10.7□□□□□ -0.7
SCARF1-201ENST00000263071 RHOHQ15669 191 aa10.7□□□□□ -0.7
SCARF1-201ENST00000263071 TMEM263Q8WUH6 116 aaKnown RBP10.7□□□□□ -0.7
SCARF1-201ENST00000263071 ORMDL2Q53FV1 153 aa10.7□□□□□ -0.7
SCARF1-201ENST00000263071 C1orf195Q5TG92 126 aa10.7□□□□□ -0.7
SCARF1-201ENST00000263071 NEXN-AS1Q8NBZ9 246 aa10.7□□□□□ -0.7
SCARF1-201ENST00000263071 JMJD1CQ15652 2540 aa10.69□□□□□ -0.7
SCARF1-201ENST00000263071 LY6LH3BQJ8 138 aa10.69□□□□□ -0.7
SCARF1-201ENST00000263071 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.69□□□□□ -0.7
SCARF1-201ENST00000263071 MUSTN1Q8IVN3 82 aa10.69□□□□□ -0.7
SCARF1-201ENST00000263071 WFDC11Q8NEX6 87 aa10.69□□□□□ -0.7
SCARF1-201ENST00000263071 TMEM190Q8WZ59 177 aa10.69□□□□□ -0.7
SCARF1-201ENST00000263071 CLEC2BQ92478 149 aa10.69□□□□□ -0.7
SCARF1-201ENST00000263071 C2orf48Q96LS8 159 aa10.69□□□□□ -0.7
SCARF1-201ENST00000263071 BPESC1Q9GZL8 116 aa10.69□□□□□ -0.7
SCARF1-201ENST00000263071 IGLV2-18A0A075B6J9 118 aa10.68□□□□□ -0.7
SCARF1-201ENST00000263071 BUB3O43684 328 aa10.68□□□□□ -0.7
SCARF1-201ENST00000263071 HOXB4P17483 251 aaPredicted RBP10.68□□□□□ -0.7
SCARF1-201ENST00000263071 A0A0B4J2C4 111 aa10.68□□□□□ -0.7
SCARF1-201ENST00000263071 PRR9Q5T870 116 aa10.68□□□□□ -0.7
SCARF1-201ENST00000263071 SYNJ2BPP57105 145 aa10.67□□□□□ -0.7
SCARF1-201ENST00000263071 Q8N9W7 124 aa10.67□□□□□ -0.7
SCARF1-201ENST00000263071 NAV2Q8IVL1 2488 aa10.67□□□□□ -0.7
SCARF1-201ENST00000263071 TRAV12-3A0A0B4J271 114 aa10.67□□□□□ -0.7
SCARF1-201ENST00000263071 C2orf66Q6UXQ4 117 aa10.67□□□□□ -0.7
SCARF1-201ENST00000263071 UNQ9165/PRO28630Q6UXU0 137 aa10.67□□□□□ -0.7
SCARF1-201ENST00000263071 TRBV30A0A0K0K1B3 111 aa10.67□□□□□ -0.7
SCARF1-201ENST00000263071 C11orf86A6NJI1 115 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms