RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 TRBV10-2A0A0K0K1G8 114 aa12.41□□□□□ -0.42
VSX2-201ENST00000261980 LY6LH3BQJ8 138 aa12.4□□□□□ -0.42
VSX2-201ENST00000261980 ZFAND3Q9H8U3 227 aa12.4□□□□□ -0.42
VSX2-201ENST00000261980 A0A0G2JNJ9 132 aa12.4□□□□□ -0.42
VSX2-201ENST00000261980 Q9UFV3 132 aa12.4□□□□□ -0.42
VSX2-201ENST00000261980 C9orf153Q5TBE3 101 aa12.39□□□□□ -0.43
VSX2-201ENST00000261980 KAAG1Q9UBP8 84 aa12.39□□□□□ -0.43
VSX2-201ENST00000261980 LINC01587Q99440 93 aa12.39□□□□□ -0.43
VSX2-201ENST00000261980 IGHV7-81A0A0B4J1V7 117 aa12.39□□□□□ -0.43
VSX2-201ENST00000261980 TRAV41A0A0B4J266 112 aa12.39□□□□□ -0.43
VSX2-201ENST00000261980 FAM208BQ5VWN6 2430 aa12.38□□□□□ -0.43
VSX2-201ENST00000261980 SUMO4Q6EEV6 95 aa12.38□□□□□ -0.43
VSX2-201ENST00000261980 METTL26Q96S19 204 aa12.38□□□□□ -0.43
VSX2-201ENST00000261980 K7ENP7 123 aa12.38□□□□□ -0.43
VSX2-201ENST00000261980 ADAMTSL4-AS1Q5T5F5 129 aa12.38□□□□□ -0.43
VSX2-201ENST00000261980 CCDC140Q96MF4 163 aa12.38□□□□□ -0.43
VSX2-201ENST00000261980 PRRC2AP48634 2157 aaKnown RBP12.38□□□□□ -0.43
VSX2-201ENST00000261980 ATP6V0E1O15342 81 aa12.37□□□□□ -0.43
VSX2-201ENST00000261980 RNASE3P12724 160 aaKnown RBP12.37□□□□□ -0.43
VSX2-201ENST00000261980 PRB1P04280 392 aa12.37□□□□□ -0.43
VSX2-201ENST00000261980 CD3EP07766 207 aa12.37□□□□□ -0.43
VSX2-201ENST00000261980 ZFAND2AQ8N6M9 145 aa12.37□□□□□ -0.43
VSX2-201ENST00000261980 Q8NA96 180 aa12.37□□□□□ -0.43
VSX2-201ENST00000261980 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
VSX2-201ENST00000261980 VMO1Q7Z5L0 202 aa12.36□□□□□ -0.43
VSX2-201ENST00000261980 MDFICQ9P1T7 246 aa12.36□□□□□ -0.43
VSX2-201ENST00000261980 IGHV4-4A0A075B6R2 117 aa12.36□□□□□ -0.43
VSX2-201ENST00000261980 IGHV3-73A0A0B4J1V6 119 aa12.36□□□□□ -0.43
VSX2-201ENST00000261980 ZNF876PQ49A33 203 aa12.36□□□□□ -0.43
VSX2-201ENST00000261980 LRRK2Q5S007 2527 aa12.35□□□□□ -0.43
VSX2-201ENST00000261980 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
VSX2-201ENST00000261980 LINC01560Q8TB33 94 aa12.35□□□□□ -0.43
VSX2-201ENST00000261980 A0A0J9YXY3 114 aa12.35□□□□□ -0.43
VSX2-201ENST00000261980 HTN1P15515 57 aa12.35□□□□□ -0.43
VSX2-201ENST00000261980 C9orf47Q6ZRZ4 202 aa12.35□□□□□ -0.43
VSX2-201ENST00000261980 ZNF625Q96I27 306 aaPredicted RBP12.35□□□□□ -0.43
VSX2-201ENST00000261980 UNQ9165/PRO28630Q6UXU0 137 aa12.34□□□□□ -0.43
VSX2-201ENST00000261980 TRBV12-3P01733 135 aa12.34□□□□□ -0.43
VSX2-201ENST00000261980 PAPPA-AS1Q5QFB9 102 aa12.34□□□□□ -0.43
VSX2-201ENST00000261980 NPBQ8NG41 125 aa12.34□□□□□ -0.43
VSX2-201ENST00000261980 IGHV3-11P01762 117 aa12.33□□□□□ -0.43
VSX2-201ENST00000261980 RNF5Q99942 180 aa12.33□□□□□ -0.43
VSX2-201ENST00000261980 EDA2RQ9HAV5 297 aa12.33□□□□□ -0.43
VSX2-201ENST00000261980 SPG11Q96JI7 2443 aa12.33□□□□□ -0.44
VSX2-201ENST00000261980 P0DMU3 169 aa12.33□□□□□ -0.44
VSX2-201ENST00000261980 FAM231AP0DMU4 169 aa12.33□□□□□ -0.44
VSX2-201ENST00000261980 FAM231CP0DMU5 169 aa12.33□□□□□ -0.44
VSX2-201ENST00000261980 Q6Q795 121 aa12.33□□□□□ -0.44
VSX2-201ENST00000261980 HRNRQ86YZ3 2850 aaPredicted RBP12.33□□□□□ -0.44
VSX2-201ENST00000261980 TMEM219Q86XT9 240 aa12.33□□□□□ -0.44
VSX2-201ENST00000261980 A0A0B4J2C4 111 aa12.32□□□□□ -0.44
VSX2-201ENST00000261980 TMEM223A0PJW6 202 aa12.32□□□□□ -0.44
VSX2-201ENST00000261980 M0R2P5 195 aa12.32□□□□□ -0.44
VSX2-201ENST00000261980 RPL13AP40429 203 aaKnown RBP12.32□□□□□ -0.44
VSX2-201ENST00000261980 CSDC2Q9Y534 153 aaKnown RBP12.32□□□□□ -0.44
VSX2-201ENST00000261980 TRAV12-2A0A075B6T6 113 aa12.32□□□□□ -0.44
VSX2-201ENST00000261980 HERVK_113P63121 156 aa12.32□□□□□ -0.44
VSX2-201ENST00000261980 IGHV3OR16-10A0A075B7F0 116 aa12.31□□□□□ -0.44
VSX2-201ENST00000261980 I3L3M4 83 aa12.31□□□□□ -0.44
VSX2-201ENST00000261980 VCYO14598 125 aa12.31□□□□□ -0.44
VSX2-201ENST00000261980 IGHV3-30-3P0DP02 117 aa12.31□□□□□ -0.44
VSX2-201ENST00000261980 SMCR5Q8TEV8 140 aa12.31□□□□□ -0.44
VSX2-201ENST00000261980 HELZ2Q9BYK8 2649 aaKnown RBP12.31□□□□□ -0.44
VSX2-201ENST00000261980 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.31□□□□□ -0.44
VSX2-201ENST00000261980 TMEM190Q8WZ59 177 aa12.31□□□□□ -0.44
VSX2-201ENST00000261980 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.3□□□□□ -0.44
VSX2-201ENST00000261980 COX6CP09669 75 aa12.3□□□□□ -0.44
VSX2-201ENST00000261980 USP9XQ93008 2570 aaPredicted RBP12.3□□□□□ -0.44
VSX2-201ENST00000261980 LEPROTO15243 131 aa12.3□□□□□ -0.44
VSX2-201ENST00000261980 POLR2KP53803 58 aaKnown RBP12.3□□□□□ -0.44
VSX2-201ENST00000261980 LINC00315P59091 139 aa12.3□□□□□ -0.44
VSX2-201ENST00000261980 TMEM101Q96IK0 257 aa12.3□□□□□ -0.44
VSX2-201ENST00000261980 EDN2P20800 178 aa12.3□□□□□ -0.44
VSX2-201ENST00000261980 NPFFO15130 113 aa12.29□□□□□ -0.44
VSX2-201ENST00000261980 NSUN5P1Q3KNT7 163 aa12.29□□□□□ -0.44
VSX2-201ENST00000261980 UBTD1Q9HAC8 227 aa12.29□□□□□ -0.44
VSX2-201ENST00000261980 HIVEP3Q5T1R4 2406 aa12.29□□□□□ -0.44
VSX2-201ENST00000261980 GRNP28799 593 aaKnown RBP12.29□□□□□ -0.44
VSX2-201ENST00000261980 Q8N9W7 124 aa12.29□□□□□ -0.44
VSX2-201ENST00000261980 TIMM21Q9BVV7 248 aa12.28□□□□□ -0.44
VSX2-201ENST00000261980 TRBV30A0A0K0K1B3 111 aa12.28□□□□□ -0.44
VSX2-201ENST00000261980 KLK9Q9UKQ9 250 aa12.28□□□□□ -0.44
VSX2-201ENST00000261980 TMEM141Q96I45 108 aa12.27□□□□□ -0.44
VSX2-201ENST00000261980 FAM19A5Q7Z5A7 132 aaPredicted RBP12.27□□□□□ -0.45
VSX2-201ENST00000261980 NDUFA12Q9UI09 145 aa12.27□□□□□ -0.45
VSX2-201ENST00000261980 IGHV1-69DA0A0B4J2H0 117 aa12.27□□□□□ -0.45
VSX2-201ENST00000261980 RHOHQ15669 191 aa12.27□□□□□ -0.45
VSX2-201ENST00000261980 TIMM17AQ99595 171 aa12.27□□□□□ -0.45
VSX2-201ENST00000261980 NDUFA7O95182 113 aa12.26□□□□□ -0.45
VSX2-201ENST00000261980 NXPH4O95158 308 aa12.26□□□□□ -0.45
VSX2-201ENST00000261980 KLRB1Q12918 225 aa12.26□□□□□ -0.45
VSX2-201ENST00000261980 BBC3Q96PG8 261 aaPredicted RBP12.26□□□□□ -0.45
VSX2-201ENST00000261980 CYSTM1Q9H1C7 97 aa12.26□□□□□ -0.45
VSX2-201ENST00000261980 KIF25-AS1Q9Y6Z4 181 aa12.26□□□□□ -0.45
VSX2-201ENST00000261980 CSPG4Q6UVK1 2322 aa12.25□□□□□ -0.45
VSX2-201ENST00000261980 CD28P10747 220 aa12.25□□□□□ -0.45
VSX2-201ENST00000261980 TMEM126AQ9H061 195 aa12.25□□□□□ -0.45
VSX2-201ENST00000261980 Q9UF83 564 aa12.25□□□□□ -0.45
VSX2-201ENST00000261980 hADV29S1A0JD25 119 aa12.24□□□□□ -0.45
VSX2-201ENST00000261980 PRM2P04554 102 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms