RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 TSKUQ8WUA8 353 aa12.69□□□□□ -0.38
UPK3B-201ENST00000257632 DNAH2Q9P225 4427 aa12.68□□□□□ -0.38
UPK3B-201ENST00000257632 IGHV3-30P01768 117 aa12.68□□□□□ -0.38
UPK3B-201ENST00000257632 IGHV3-33P01772 117 aa12.68□□□□□ -0.38
UPK3B-201ENST00000257632 IGHV3-30-3P0DP02 117 aa12.68□□□□□ -0.38
UPK3B-201ENST00000257632 IGHV3-30-5P0DP03 117 aa12.68□□□□□ -0.38
UPK3B-201ENST00000257632 TNP2Q05952 138 aa12.68□□□□□ -0.38
UPK3B-201ENST00000257632 SUMO4Q6EEV6 95 aa12.68□□□□□ -0.38
UPK3B-201ENST00000257632 CLLU1Q5K131 121 aa12.67□□□□□ -0.38
UPK3B-201ENST00000257632 NFE4Q86UQ8 179 aa12.67□□□□□ -0.38
UPK3B-201ENST00000257632 GFRA4Q9GZZ7 299 aa12.67□□□□□ -0.38
UPK3B-201ENST00000257632 TNFRSF18Q9Y5U5 241 aa12.67□□□□□ -0.38
UPK3B-201ENST00000257632 HECTD4Q9Y4D8 3996 aa12.66□□□□□ -0.38
UPK3B-201ENST00000257632 HIGD1CA8MV81 97 aa12.66□□□□□ -0.38
UPK3B-201ENST00000257632 FOXA3P55318 350 aaPredicted RBP12.66□□□□□ -0.38
UPK3B-201ENST00000257632 V9GYV3 84 aa12.66□□□□□ -0.38
UPK3B-201ENST00000257632 A0A1B0GVY2 172 aa12.65□□□□□ -0.38
UPK3B-201ENST00000257632 FAM231BA6NCW3 169 aa12.65□□□□□ -0.38
UPK3B-201ENST00000257632 M0QY20 66 aa12.65□□□□□ -0.38
UPK3B-201ENST00000257632 RASL11AQ6T310 242 aa12.65□□□□□ -0.38
UPK3B-201ENST00000257632 DNAJC30Q96LL9 226 aa12.65□□□□□ -0.38
UPK3B-201ENST00000257632 URGCP-MRPS24S4R325 110 aa12.65□□□□□ -0.38
UPK3B-201ENST00000257632 A0A1B0GUT8 65 aa12.64□□□□□ -0.39
UPK3B-201ENST00000257632 DAZ4Q86SG3 579 aaKnown RBP12.64□□□□□ -0.39
UPK3B-201ENST00000257632 DAZ3Q9NR90 486 aaKnown RBP12.64□□□□□ -0.39
UPK3B-201ENST00000257632 DNAH17Q9UFH2 4485 aa12.63□□□□□ -0.39
UPK3B-201ENST00000257632 IFITM2Q01629 132 aa12.63□□□□□ -0.39
UPK3B-201ENST00000257632 KCNIP4Q6PIL6 250 aa12.63□□□□□ -0.39
UPK3B-201ENST00000257632 TRBV6-8A0A0A6YYG3 113 aa12.62□□□□□ -0.39
UPK3B-201ENST00000257632 TMEM97Q5BJF2 176 aa12.62□□□□□ -0.39
UPK3B-201ENST00000257632 IBA57-AS1B1ANH7 110 aa12.61□□□□□ -0.39
UPK3B-201ENST00000257632 Q6ZRN7 208 aaPredicted RBP12.61□□□□□ -0.39
UPK3B-201ENST00000257632 Q8N3U1 123 aa12.61□□□□□ -0.39
UPK3B-201ENST00000257632 Q9HAA7 133 aa12.61□□□□□ -0.39
UPK3B-201ENST00000257632 NIT2Q9NQR4 276 aa12.61□□□□□ -0.39
UPK3B-201ENST00000257632 NAT8BQ9UHF3 227 aa12.61□□□□□ -0.39
UPK3B-201ENST00000257632 FAT2Q9NYQ8 4349 aa12.6□□□□□ -0.39
UPK3B-201ENST00000257632 A0A087WX48 190 aa12.6□□□□□ -0.39
UPK3B-201ENST00000257632 RIGQ13278 110 aa12.6□□□□□ -0.39
UPK3B-201ENST00000257632 NIT1Q86X76 327 aa12.6□□□□□ -0.39
UPK3B-201ENST00000257632 NUP35Q8NFH5 326 aa12.6□□□□□ -0.39
UPK3B-201ENST00000257632 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
UPK3B-201ENST00000257632 TMEM262E9PQX1 116 aa12.59□□□□□ -0.39
UPK3B-201ENST00000257632 GATD1Q8NB37 220 aa12.59□□□□□ -0.39
UPK3B-201ENST00000257632 CHCHD5Q9BSY4 110 aa12.59□□□□□ -0.39
UPK3B-201ENST00000257632 KIAA1109Q2LD37 5005 aa12.58□□□□□ -0.4
UPK3B-201ENST00000257632 PSCAO43653 123 aa12.58□□□□□ -0.4
UPK3B-201ENST00000257632 LAGE3Q14657 143 aa12.58□□□□□ -0.4
UPK3B-201ENST00000257632 TRBV25-1A0A075B6N4 114 aa12.57□□□□□ -0.4
UPK3B-201ENST00000257632 EREGO14944 169 aa12.57□□□□□ -0.4
UPK3B-201ENST00000257632 PNRC1Q12796 327 aaPredicted RBP12.57□□□□□ -0.4
UPK3B-201ENST00000257632 FRZBQ92765 325 aa12.57□□□□□ -0.4
UPK3B-201ENST00000257632 CHCHD7Q9BUK0 85 aa12.57□□□□□ -0.4
UPK3B-201ENST00000257632 TMEM191AQ9H0A3 160 aa12.57□□□□□ -0.4
UPK3B-201ENST00000257632 PCLOQ9Y6V0 5065 aa12.57□□□□□ -0.4
UPK3B-201ENST00000257632 SMIM27A0A1W2PRY6 76 aa12.56□□□□□ -0.4
UPK3B-201ENST00000257632 PKIAP61925 76 aa12.56□□□□□ -0.4
UPK3B-201ENST00000257632 ELOBQ15370 118 aa12.56□□□□□ -0.4
UPK3B-201ENST00000257632 NTM-AS1Q6ZSK4 140 aa12.56□□□□□ -0.4
UPK3B-201ENST00000257632 TRAV8-3A0A0A6YYJ7 113 aa12.55□□□□□ -0.4
UPK3B-201ENST00000257632 IGHV1-24A0A0C4DH33 117 aa12.55□□□□□ -0.4
UPK3B-201ENST00000257632 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
UPK3B-201ENST00000257632 UQCC3Q6UW78 93 aa12.55□□□□□ -0.4
UPK3B-201ENST00000257632 RPL39LQ96EH5 51 aaKnown RBP12.55□□□□□ -0.4
UPK3B-201ENST00000257632 KLK12Q9UKR0 248 aa12.55□□□□□ -0.4
UPK3B-201ENST00000257632 COTL1Q14019 142 aa12.54□□□□□ -0.4
UPK3B-201ENST00000257632 AMN1Q8IY45 258 aa12.54□□□□□ -0.4
UPK3B-201ENST00000257632 GAGE6Q13070 117 aa12.53□□□□□ -0.4
UPK3B-201ENST00000257632 IQCJQ1A5X6 159 aa12.53□□□□□ -0.4
UPK3B-201ENST00000257632 SPATA12Q7Z6I5 190 aa12.53□□□□□ -0.4
UPK3B-201ENST00000257632 TM2D2Q9BX73 214 aa12.53□□□□□ -0.4
UPK3B-201ENST00000257632 CAMPP49913 170 aa12.52□□□□□ -0.41
UPK3B-201ENST00000257632 MPV17L2Q567V2 206 aa12.52□□□□□ -0.41
UPK3B-201ENST00000257632 DEFB104AQ8WTQ1 72 aa12.52□□□□□ -0.41
UPK3B-201ENST00000257632 UBE2WQ96B02 151 aa12.52□□□□□ -0.41
UPK3B-201ENST00000257632 TMEM243Q9BU79 118 aa12.52□□□□□ -0.41
UPK3B-201ENST00000257632 A0A1B0GW15 77 aa12.51□□□□□ -0.41
UPK3B-201ENST00000257632 C16orf90A8MZG2 172 aa12.51□□□□□ -0.41
UPK3B-201ENST00000257632 MT-ND4LP03901 98 aa12.51□□□□□ -0.41
UPK3B-201ENST00000257632 ANGP03950 147 aaKnown RBP12.51□□□□□ -0.41
UPK3B-201ENST00000257632 RAB4AP20338 218 aa12.51□□□□□ -0.41
UPK3B-201ENST00000257632 AMTP48728 403 aa12.51□□□□□ -0.41
UPK3B-201ENST00000257632 MRPL54Q6P161 138 aaKnown RBP12.51□□□□□ -0.41
UPK3B-201ENST00000257632 COMMD7Q86VX2 200 aa12.51□□□□□ -0.41
UPK3B-201ENST00000257632 RMI2Q96E14 147 aa12.51□□□□□ -0.41
UPK3B-201ENST00000257632 MRAP2Q96G30 205 aa12.51□□□□□ -0.41
UPK3B-201ENST00000257632 RNF185Q96GF1 192 aa12.51□□□□□ -0.41
UPK3B-201ENST00000257632 A0A087WTM6 91 aa12.5□□□□□ -0.41
UPK3B-201ENST00000257632 SDHAF1A6NFY7 115 aa12.5□□□□□ -0.41
UPK3B-201ENST00000257632 F8W036 122 aa12.5□□□□□ -0.41
UPK3B-201ENST00000257632 CRPP02741 224 aa12.5□□□□□ -0.41
UPK3B-201ENST00000257632 S100A8P05109 93 aa12.5□□□□□ -0.41
UPK3B-201ENST00000257632 ATRAIDQ6UW56 229 aa12.5□□□□□ -0.41
UPK3B-201ENST00000257632 ANAPC16Q96DE5 110 aa12.5□□□□□ -0.41
UPK3B-201ENST00000257632 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
UPK3B-201ENST00000257632 UBE2L6O14933 153 aa12.49□□□□□ -0.41
UPK3B-201ENST00000257632 Q8N976 141 aa12.49□□□□□ -0.41
UPK3B-201ENST00000257632 ST20Q9HBF5 79 aa12.49□□□□□ -0.41
UPK3B-201ENST00000257632 IGKV2D-24A0A075B6R9 120 aa12.48□□□□□ -0.41
UPK3B-201ENST00000257632 TRBV6-5A0A0K0K1A5 114 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms