RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 TCL1BO95988 128 aa12.61□□□□□ -0.39
SLC52A1-201ENST00000254853 LEPROTO15243 131 aa12.6□□□□□ -0.39
SLC52A1-201ENST00000254853 ATP6V0E2Q8NHE4 81 aa12.6□□□□□ -0.39
SLC52A1-201ENST00000254853 PTH2Q96A98 100 aa12.6□□□□□ -0.39
SLC52A1-201ENST00000254853 IGHV3-64A0A075B6Q5 118 aa12.59□□□□□ -0.39
SLC52A1-201ENST00000254853 I3L3M4 83 aa12.59□□□□□ -0.39
SLC52A1-201ENST00000254853 LYRM7Q5U5X0 104 aa12.59□□□□□ -0.39
SLC52A1-201ENST00000254853 C10orf126Q8N4M7 172 aa12.59□□□□□ -0.39
SLC52A1-201ENST00000254853 ZNF22P17026 224 aaPredicted RBP12.59□□□□□ -0.39
SLC52A1-201ENST00000254853 NRGNQ92686 78 aa12.59□□□□□ -0.39
SLC52A1-201ENST00000254853 CSPG4Q6UVK1 2322 aa12.59□□□□□ -0.39
SLC52A1-201ENST00000254853 MAP1AP78559 2803 aaPredicted RBP12.58□□□□□ -0.39
SLC52A1-201ENST00000254853 A0A0J9YXV3 536 aa12.58□□□□□ -0.4
SLC52A1-201ENST00000254853 PRO1854Q9UHT4 67 aa12.58□□□□□ -0.4
SLC52A1-201ENST00000254853 IGLV4-3A0A075B6K6 122 aa12.58□□□□□ -0.4
SLC52A1-201ENST00000254853 TMEM89A2RUT3 159 aa12.58□□□□□ -0.4
SLC52A1-201ENST00000254853 RHODO00212 210 aa12.58□□□□□ -0.4
SLC52A1-201ENST00000254853 TGFAP01135 160 aa12.58□□□□□ -0.4
SLC52A1-201ENST00000254853 RBMY1A1P0DJD3 496 aaKnown RBP12.57□□□□□ -0.4
SLC52A1-201ENST00000254853 RBMY1CP0DJD4 496 aa12.57□□□□□ -0.4
SLC52A1-201ENST00000254853 RBMY1FQ15415 496 aaKnown RBP12.57□□□□□ -0.4
SLC52A1-201ENST00000254853 A4D1N5 150 aa12.57□□□□□ -0.4
SLC52A1-201ENST00000254853 EIF4EBP3O60516 100 aaPredicted RBP12.57□□□□□ -0.4
SLC52A1-201ENST00000254853 VCX2Q9H322 139 aa12.57□□□□□ -0.4
SLC52A1-201ENST00000254853 TRGV11A0A075B6L2 103 aa12.56□□□□□ -0.4
SLC52A1-201ENST00000254853 IGHV3-73A0A0B4J1V6 119 aa12.56□□□□□ -0.4
SLC52A1-201ENST00000254853 GATA3P23771 443 aa12.56□□□□□ -0.4
SLC52A1-201ENST00000254853 HTN1P15515 57 aa12.56□□□□□ -0.4
SLC52A1-201ENST00000254853 HOXD3P31249 432 aaPredicted RBP12.56□□□□□ -0.4
SLC52A1-201ENST00000254853 TRBV20-1A0A075B6N2 111 aa12.55□□□□□ -0.4
SLC52A1-201ENST00000254853 TRAV2A0A0B4J234 112 aa12.55□□□□□ -0.4
SLC52A1-201ENST00000254853 SCGB1C2P0DMR2 95 aa12.55□□□□□ -0.4
SLC52A1-201ENST00000254853 PROK1P58294 105 aa12.55□□□□□ -0.4
SLC52A1-201ENST00000254853 CARD19Q96LW7 228 aa12.55□□□□□ -0.4
SLC52A1-201ENST00000254853 KNCNA6PVL3 124 aa12.55□□□□□ -0.4
SLC52A1-201ENST00000254853 RAX2Q96IS3 184 aa12.55□□□□□ -0.4
SLC52A1-201ENST00000254853 CDIP1Q9H305 208 aa12.55□□□□□ -0.4
SLC52A1-201ENST00000254853 CELSR2Q9HCU4 2923 aa12.54□□□□□ -0.4
SLC52A1-201ENST00000254853 RNF152Q8N8N0 203 aa12.54□□□□□ -0.4
SLC52A1-201ENST00000254853 SORL1Q92673 2214 aa12.54□□□□□ -0.4
SLC52A1-201ENST00000254853 MUSTN1Q8IVN3 82 aa12.54□□□□□ -0.4
SLC52A1-201ENST00000254853 LINC01356Q8N9X3 169 aa12.54□□□□□ -0.4
SLC52A1-201ENST00000254853 FHL3Q13643 280 aa12.53□□□□□ -0.4
SLC52A1-201ENST00000254853 TEN1Q86WV5 123 aa12.53□□□□□ -0.4
SLC52A1-201ENST00000254853 SBSPONQ8IVN8 264 aa12.53□□□□□ -0.4
SLC52A1-201ENST00000254853 TMEM263Q8WUH6 116 aaKnown RBP12.53□□□□□ -0.4
SLC52A1-201ENST00000254853 FAM104AQ969W3 186 aa12.53□□□□□ -0.4
SLC52A1-201ENST00000254853 DOPEY2Q9Y3R5 2298 aa12.53□□□□□ -0.4
SLC52A1-201ENST00000254853 PRM2P04554 102 aa12.52□□□□□ -0.4
SLC52A1-201ENST00000254853 MAPK1IP1LQ8NDC0 245 aa12.52□□□□□ -0.4
SLC52A1-201ENST00000254853 PPDPFLQ8WWR9 84 aa12.52□□□□□ -0.4
SLC52A1-201ENST00000254853 IGHV3-33P01772 117 aa12.52□□□□□ -0.41
SLC52A1-201ENST00000254853 CD28P10747 220 aa12.52□□□□□ -0.41
SLC52A1-201ENST00000254853 TCTEX1D4Q5JR98 221 aa12.52□□□□□ -0.41
SLC52A1-201ENST00000254853 CEMP1Q6PRD7 247 aaPredicted RBP12.52□□□□□ -0.41
SLC52A1-201ENST00000254853 A8MWV9 139 aa12.51□□□□□ -0.41
SLC52A1-201ENST00000254853 SPXQ9BT56 116 aa12.51□□□□□ -0.41
SLC52A1-201ENST00000254853 CRYBG3Q68DQ2 2970 aa12.51□□□□□ -0.41
SLC52A1-201ENST00000254853 ADARB2-AS1A8MUL3 147 aa12.51□□□□□ -0.41
SLC52A1-201ENST00000254853 H7C2G1 150 aa12.51□□□□□ -0.41
SLC52A1-201ENST00000254853 ELANEP08246 267 aa12.51□□□□□ -0.41
SLC52A1-201ENST00000254853 DSCR9P59020 149 aa12.51□□□□□ -0.41
SLC52A1-201ENST00000254853 A0A0J9YXY3 114 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 M0R2P5 195 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 DEFB131AP59861 70 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 ZNF702PQ9H963 129 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 Q9UF83 564 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 IGHV3-30-3P0DP02 117 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 RNASE13Q5GAN3 156 aaKnown RBP12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 UBE2E2Q96LR5 201 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 EDA2RQ9HAV5 297 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 VPREB3Q9UKI3 123 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 ERG28Q9UKR5 140 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 PYGO1Q9Y3Y4 419 aa12.5□□□□□ -0.41
SLC52A1-201ENST00000254853 A0A0B4J2C4 111 aa12.49□□□□□ -0.41
SLC52A1-201ENST00000254853 C18orf65Q6ZTR6 163 aa12.49□□□□□ -0.41
SLC52A1-201ENST00000254853 ANKRD29Q8N6D5 301 aa12.49□□□□□ -0.41
SLC52A1-201ENST00000254853 RBMY1BA6NDE4 496 aaKnown RBP12.49□□□□□ -0.41
SLC52A1-201ENST00000254853 RBMY1EA6NEQ0 496 aaKnown RBP12.49□□□□□ -0.41
SLC52A1-201ENST00000254853 RBMY1DP0C7P1 496 aaKnown RBP12.49□□□□□ -0.41
SLC52A1-201ENST00000254853 SLURP1P55000 103 aa12.49□□□□□ -0.41
SLC52A1-201ENST00000254853 DEFB136Q30KP8 78 aa12.49□□□□□ -0.41
SLC52A1-201ENST00000254853 A0A096LNT2 108 aa12.48□□□□□ -0.41
SLC52A1-201ENST00000254853 MRPS36P82909 103 aaKnown RBP12.48□□□□□ -0.41
SLC52A1-201ENST00000254853 TIMM21Q9BVV7 248 aa12.48□□□□□ -0.41
SLC52A1-201ENST00000254853 TNFRSF18Q9Y5U5 241 aa12.48□□□□□ -0.41
SLC52A1-201ENST00000254853 ACACBO00763 2458 aa12.48□□□□□ -0.41
SLC52A1-201ENST00000254853 TRAV8-3A0A0A6YYJ7 113 aa12.48□□□□□ -0.41
SLC52A1-201ENST00000254853 Q6ZSN1 163 aa12.48□□□□□ -0.41
SLC52A1-201ENST00000254853 DUX3Q96PT4 197 aa12.48□□□□□ -0.41
SLC52A1-201ENST00000254853 PKD1L2Q7Z442 2459 aa12.48□□□□□ -0.41
SLC52A1-201ENST00000254853 CIDEAO60543 219 aa12.47□□□□□ -0.41
SLC52A1-201ENST00000254853 H3BMM0 161 aa12.47□□□□□ -0.41
SLC52A1-201ENST00000254853 MT-ATP8P03928 68 aa12.47□□□□□ -0.41
SLC52A1-201ENST00000254853 CFAP46Q8IYW2 2715 aa12.46□□□□□ -0.41
SLC52A1-201ENST00000254853 C9JAW5 83 aa12.46□□□□□ -0.41
SLC52A1-201ENST00000254853 J3QLI3 93 aa12.46□□□□□ -0.41
SLC52A1-201ENST00000254853 SLC25A20O43772 301 aa12.46□□□□□ -0.41
SLC52A1-201ENST00000254853 LITAFQ99732 161 aa12.46□□□□□ -0.41
SLC52A1-201ENST00000254853 BEX4Q9NWD9 120 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms