RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TMEM242Q9NWH2 141 aa13.97□□□□□ -0.17
NEDD8-201ENST00000250495 URGCP-MRPS24S4R325 110 aa13.97□□□□□ -0.17
NEDD8-201ENST00000250495 DMBT1Q9UGM3 2413 aaPredicted RBP13.96□□□□□ -0.17
NEDD8-201ENST00000250495 COLCA2A8K830 154 aa13.96□□□□□ -0.17
NEDD8-201ENST00000250495 TMEM241Q24JQ0 296 aa13.96□□□□□ -0.17
NEDD8-201ENST00000250495 ZNF674Q2M3X9 581 aa13.96□□□□□ -0.17
NEDD8-201ENST00000250495 FAM74A4Q5TZK3 123 aa13.96□□□□□ -0.17
NEDD8-201ENST00000250495 C11orf52Q96A22 123 aa13.96□□□□□ -0.17
NEDD8-201ENST00000250495 SFRP2Q96HF1 295 aa13.96□□□□□ -0.17
NEDD8-201ENST00000250495 FAM30AQ9NZY2 134 aa13.96□□□□□ -0.17
NEDD8-201ENST00000250495 TRBV6-1A0A0K0K1D8 114 aa13.95□□□□□ -0.18
NEDD8-201ENST00000250495 MT-ND4LP03901 98 aa13.95□□□□□ -0.18
NEDD8-201ENST00000250495 WFDC2Q14508 124 aa13.95□□□□□ -0.18
NEDD8-201ENST00000250495 CST9LP1Q5W188 147 aa13.95□□□□□ -0.18
NEDD8-201ENST00000250495 RMI2Q96E14 147 aa13.95□□□□□ -0.18
NEDD8-201ENST00000250495 CTDSP1Q9GZU7 261 aa13.95□□□□□ -0.18
NEDD8-201ENST00000250495 LINC01559Q495D7 138 aa13.94□□□□□ -0.18
NEDD8-201ENST00000250495 A0A087WWL8 130 aa13.93□□□□□ -0.18
NEDD8-201ENST00000250495 M0R381 172 aa13.93□□□□□ -0.18
NEDD8-201ENST00000250495 LTAP01374 205 aa13.93□□□□□ -0.18
NEDD8-201ENST00000250495 AKR1C3P42330 323 aa13.93□□□□□ -0.18
NEDD8-201ENST00000250495 NIT1Q86X76 327 aa13.93□□□□□ -0.18
NEDD8-201ENST00000250495 ZFP82Q8N141 532 aa13.93□□□□□ -0.18
NEDD8-201ENST00000250495 YPEL4Q96NS1 127 aa13.93□□□□□ -0.18
NEDD8-201ENST00000250495 FLG2Q5D862 2391 aaPredicted RBP13.93□□□□□ -0.18
NEDD8-201ENST00000250495 TMSB15BA0A087X1C1 80 aa13.92□□□□□ -0.18
NEDD8-201ENST00000250495 TRBV10-1A0A0K0K1A3 114 aa13.92□□□□□ -0.18
NEDD8-201ENST00000250495 LECT2O14960 151 aa13.92□□□□□ -0.18
NEDD8-201ENST00000250495 HERC1Q15751 4861 aa13.91□□□□□ -0.18
NEDD8-201ENST00000250495 RPL23P62829 140 aaKnown RBP13.91□□□□□ -0.18
NEDD8-201ENST00000250495 RPL36AP83881 106 aaKnown RBP13.91□□□□□ -0.18
NEDD8-201ENST00000250495 ELOBQ15370 118 aa13.91□□□□□ -0.18
NEDD8-201ENST00000250495 KCNIP4Q6PIL6 250 aa13.91□□□□□ -0.18
NEDD8-201ENST00000250495 BAALCQ8WXS3 180 aa13.91□□□□□ -0.18
NEDD8-201ENST00000250495 RPL36ALQ969Q0 106 aaKnown RBP13.91□□□□□ -0.18
NEDD8-201ENST00000250495 DNAH8Q96JB1 4490 aa13.91□□□□□ -0.18
NEDD8-201ENST00000250495 SRRM2Q9UQ35 2752 aaKnown RBP13.91□□□□□ -0.18
NEDD8-201ENST00000250495 A0A087WX48 190 aa13.9□□□□□ -0.18
NEDD8-201ENST00000250495 LOC105371267A0A1B0GV96 52 aa13.9□□□□□ -0.18
NEDD8-201ENST00000250495 Q8N976 141 aa13.9□□□□□ -0.18
NEDD8-201ENST00000250495 CHCHD7Q9BUK0 85 aa13.9□□□□□ -0.18
NEDD8-201ENST00000250495 KLK12Q9UKR0 248 aa13.9□□□□□ -0.18
NEDD8-201ENST00000250495 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.89□□□□□ -0.19
NEDD8-201ENST00000250495 IGKV2D-24A0A075B6R9 120 aa13.89□□□□□ -0.19
NEDD8-201ENST00000250495 S100A9P06702 114 aaKnown RBP13.89□□□□□ -0.19
NEDD8-201ENST00000250495 ADIRFQ15847 76 aa13.89□□□□□ -0.19
NEDD8-201ENST00000250495 TRBV7-3A0A075B6L6 115 aa13.88□□□□□ -0.19
NEDD8-201ENST00000250495 Q6ZSA8 131 aa13.88□□□□□ -0.19
NEDD8-201ENST00000250495 ISOC2Q96AB3 205 aa13.88□□□□□ -0.19
NEDD8-201ENST00000250495 ANAPC16Q96DE5 110 aa13.88□□□□□ -0.19
NEDD8-201ENST00000250495 SCO2A0A1W2PP80 73 aa13.87□□□□□ -0.19
NEDD8-201ENST00000250495 PLA2G1BP04054 148 aaKnown RBP13.87□□□□□ -0.19
NEDD8-201ENST00000250495 RAB5AP20339 215 aa13.87□□□□□ -0.19
NEDD8-201ENST00000250495 UBE2D3P61077 147 aa13.87□□□□□ -0.19
NEDD8-201ENST00000250495 UBE2D2P62837 147 aa13.87□□□□□ -0.19
NEDD8-201ENST00000250495 UBE2WQ96B02 151 aa13.87□□□□□ -0.19
NEDD8-201ENST00000250495 RAB4BP61018 213 aa13.86□□□□□ -0.19
NEDD8-201ENST00000250495 LINC01551Q86U37 167 aa13.86□□□□□ -0.19
NEDD8-201ENST00000250495 OR10G8Q8NGN5 311 aa13.86□□□□□ -0.19
NEDD8-201ENST00000250495 PPP1R2P9O14990 202 aa13.85□□□□□ -0.19
NEDD8-201ENST00000250495 Q0VG73 95 aa13.85□□□□□ -0.19
NEDD8-201ENST00000250495 TMEM262E9PQX1 116 aa13.84□□□□□ -0.19
NEDD8-201ENST00000250495 CXCL1P09341 107 aa13.84□□□□□ -0.19
NEDD8-201ENST00000250495 RAB5BP61020 215 aa13.84□□□□□ -0.19
NEDD8-201ENST00000250495 DNAJC30Q96LL9 226 aa13.84□□□□□ -0.19
NEDD8-201ENST00000250495 TRBV24-1A0A075B6N3 115 aa13.83□□□□□ -0.2
NEDD8-201ENST00000250495 C1orf196B1AJZ1 125 aa13.83□□□□□ -0.2
NEDD8-201ENST00000250495 BAGE2Q86Y30 109 aa13.83□□□□□ -0.2
NEDD8-201ENST00000250495 DERL1Q9BUN8 251 aa13.83□□□□□ -0.2
NEDD8-201ENST00000250495 MYCBP2O75592 4640 aa13.83□□□□□ -0.2
NEDD8-201ENST00000250495 TRBV6-8A0A0A6YYG3 113 aa13.82□□□□□ -0.2
NEDD8-201ENST00000250495 RPL19P84098 196 aaKnown RBP13.82□□□□□ -0.2
NEDD8-201ENST00000250495 ZNF56Q15929 161 aa13.82□□□□□ -0.2
NEDD8-201ENST00000250495 LINC00528Q8N1L1 170 aa13.82□□□□□ -0.2
NEDD8-201ENST00000250495 IMMP2LQ96T52 175 aa13.82□□□□□ -0.2
NEDD8-201ENST00000250495 MLST8Q9BVC4 326 aa13.82□□□□□ -0.2
NEDD8-201ENST00000250495 TRBV20OR9-2A0A075B6H5 130 aa13.81□□□□□ -0.2
NEDD8-201ENST00000250495 J3QL48 77 aa13.81□□□□□ -0.2
NEDD8-201ENST00000250495 S100PP25815 95 aa13.81□□□□□ -0.2
NEDD8-201ENST00000250495 RPL35P42766 123 aaKnown RBP13.81□□□□□ -0.2
NEDD8-201ENST00000250495 OR10AG1Q8NH19 301 aa13.81□□□□□ -0.2
NEDD8-201ENST00000250495 BTF3L4Q96K17 158 aa13.81□□□□□ -0.2
NEDD8-201ENST00000250495 SSBP4Q9BWG4 385 aaPredicted RBP13.81□□□□□ -0.2
NEDD8-201ENST00000250495 SNAI2O43623 268 aa13.8□□□□□ -0.2
NEDD8-201ENST00000250495 LINC01620Q4KN68 170 aa13.8□□□□□ -0.2
NEDD8-201ENST00000250495 SPANXN1Q5VSR9 72 aa13.8□□□□□ -0.2
NEDD8-201ENST00000250495 PRR27Q6MZM9 219 aa13.8□□□□□ -0.2
NEDD8-201ENST00000250495 NEXN-AS1Q8NBZ9 246 aa13.8□□□□□ -0.2
NEDD8-201ENST00000250495 C1orf43Q9BWL3 253 aa13.8□□□□□ -0.2
NEDD8-201ENST00000250495 OR5AL1P0C617 328 aa13.79□□□□□ -0.2
NEDD8-201ENST00000250495 GNG4P50150 75 aa13.79□□□□□ -0.2
NEDD8-201ENST00000250495 PKIAP61925 76 aa13.79□□□□□ -0.2
NEDD8-201ENST00000250495 C14orf177Q52M58 125 aa13.79□□□□□ -0.2
NEDD8-201ENST00000250495 F5H697 171 aa13.78□□□□□ -0.2
NEDD8-201ENST00000250495 CRPP02741 224 aa13.78□□□□□ -0.2
NEDD8-201ENST00000250495 TMEM97Q5BJF2 176 aa13.77□□□□□ -0.21
NEDD8-201ENST00000250495 CENPWQ5EE01 88 aa13.77□□□□□ -0.21
NEDD8-201ENST00000250495 ENHOQ6UWT2 76 aa13.77□□□□□ -0.21
NEDD8-201ENST00000250495 SCXQ7RTU7 201 aa13.77□□□□□ -0.21
NEDD8-201ENST00000250495 OCC1Q8TAD7 63 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms