RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 Q6ZSV7 163 aa12.62□□□□□ -0.39
SGPP1-201ENST00000247225 PRO1854Q9UHT4 67 aa12.62□□□□□ -0.39
SGPP1-201ENST00000247225 U3KQE9 123 aa12.62□□□□□ -0.39
SGPP1-201ENST00000247225 MTORP42345 2549 aa12.61□□□□□ -0.39
SGPP1-201ENST00000247225 IGHV1-69DA0A0B4J2H0 117 aa12.61□□□□□ -0.39
SGPP1-201ENST00000247225 NDUFA4O00483 81 aa12.61□□□□□ -0.39
SGPP1-201ENST00000247225 IGHV1-69P01742 117 aa12.61□□□□□ -0.39
SGPP1-201ENST00000247225 SYNJ2BPP57105 145 aa12.61□□□□□ -0.39
SGPP1-201ENST00000247225 Q8N1Y9 231 aa12.61□□□□□ -0.39
SGPP1-201ENST00000247225 ZNF625Q96I27 306 aaPredicted RBP12.61□□□□□ -0.39
SGPP1-201ENST00000247225 DAZ1Q9NQZ3 744 aaKnown RBP12.61□□□□□ -0.39
SGPP1-201ENST00000247225 PIEZO1Q92508 2521 aa12.61□□□□□ -0.39
SGPP1-201ENST00000247225 IGHV4-4A0A075B6R2 117 aa12.61□□□□□ -0.39
SGPP1-201ENST00000247225 CARD19Q96LW7 228 aa12.61□□□□□ -0.39
SGPP1-201ENST00000247225 TRBV20-1A0A075B6N2 111 aa12.6□□□□□ -0.39
SGPP1-201ENST00000247225 IGHV3-16A0A0C4DH30 117 aa12.6□□□□□ -0.39
SGPP1-201ENST00000247225 FAM223BA6NKX1 122 aa12.6□□□□□ -0.39
SGPP1-201ENST00000247225 FAM223AQ8IWN6 122 aa12.6□□□□□ -0.39
SGPP1-201ENST00000247225 MRPL53Q96EL3 112 aaKnown RBP12.6□□□□□ -0.39
SGPP1-201ENST00000247225 ERG28Q9UKR5 140 aa12.6□□□□□ -0.39
SGPP1-201ENST00000247225 IGHV3OR16-12A0A075B7B8 117 aa12.6□□□□□ -0.39
SGPP1-201ENST00000247225 ID1P41134 155 aa12.6□□□□□ -0.39
SGPP1-201ENST00000247225 CRYBA4P53673 196 aa12.6□□□□□ -0.39
SGPP1-201ENST00000247225 ATP5J2P56134 94 aa12.59□□□□□ -0.39
SGPP1-201ENST00000247225 FBXL19-AS1Q494R0 122 aa12.59□□□□□ -0.39
SGPP1-201ENST00000247225 SPATA25Q9BR10 227 aa12.59□□□□□ -0.39
SGPP1-201ENST00000247225 GATA3P23771 443 aa12.59□□□□□ -0.39
SGPP1-201ENST00000247225 NTN5Q8WTR8 489 aaPredicted RBP12.59□□□□□ -0.39
SGPP1-201ENST00000247225 Q9UF83 564 aa12.59□□□□□ -0.39
SGPP1-201ENST00000247225 CDIP1Q9H305 208 aa12.59□□□□□ -0.39
SGPP1-201ENST00000247225 SLC25A20O43772 301 aa12.58□□□□□ -0.4
SGPP1-201ENST00000247225 IGIPA6NJ69 53 aa12.58□□□□□ -0.4
SGPP1-201ENST00000247225 GNLYP22749 145 aa12.58□□□□□ -0.4
SGPP1-201ENST00000247225 Q6ZUT4 128 aa12.58□□□□□ -0.4
SGPP1-201ENST00000247225 C10orf126Q8N4M7 172 aa12.58□□□□□ -0.4
SGPP1-201ENST00000247225 PPDPFLQ8WWR9 84 aa12.58□□□□□ -0.4
SGPP1-201ENST00000247225 CD28P10747 220 aa12.57□□□□□ -0.4
SGPP1-201ENST00000247225 COX6B1P14854 86 aa12.57□□□□□ -0.4
SGPP1-201ENST00000247225 UBE2D1P51668 147 aa12.57□□□□□ -0.4
SGPP1-201ENST00000247225 RNF183Q96D59 192 aa12.57□□□□□ -0.4
SGPP1-201ENST00000247225 IGHV3-30P01768 117 aa12.57□□□□□ -0.4
SGPP1-201ENST00000247225 IGHV3-30-5P0DP03 117 aa12.57□□□□□ -0.4
SGPP1-201ENST00000247225 FBN2P35556 2912 aa12.57□□□□□ -0.4
SGPP1-201ENST00000247225 PPP1R17O96001 155 aa12.57□□□□□ -0.4
SGPP1-201ENST00000247225 ELANEP08246 267 aa12.57□□□□□ -0.4
SGPP1-201ENST00000247225 LYRM7Q5U5X0 104 aa12.57□□□□□ -0.4
SGPP1-201ENST00000247225 LINC00315P59091 139 aa12.56□□□□□ -0.4
SGPP1-201ENST00000247225 DEFB136Q30KP8 78 aa12.56□□□□□ -0.4
SGPP1-201ENST00000247225 TEN1Q86WV5 123 aa12.56□□□□□ -0.4
SGPP1-201ENST00000247225 ANAPC13Q9BS18 74 aa12.56□□□□□ -0.4
SGPP1-201ENST00000247225 ANKRD17O75179 2603 aaKnown RBP12.56□□□□□ -0.4
SGPP1-201ENST00000247225 POLR2KP53803 58 aaKnown RBP12.55□□□□□ -0.4
SGPP1-201ENST00000247225 PRSS47A8MTI9 375 aa12.55□□□□□ -0.4
SGPP1-201ENST00000247225 SOCS3O14543 225 aa12.55□□□□□ -0.4
SGPP1-201ENST00000247225 LENEPQ9Y5L5 61 aa12.55□□□□□ -0.4
SGPP1-201ENST00000247225 CFAP46Q8IYW2 2715 aa12.54□□□□□ -0.4
SGPP1-201ENST00000247225 SLC25A29Q8N8R3 303 aa12.54□□□□□ -0.4
SGPP1-201ENST00000247225 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.54□□□□□ -0.4
SGPP1-201ENST00000247225 IGKV2-29A2NJV5 120 aaPredicted RBP12.54□□□□□ -0.4
SGPP1-201ENST00000247225 IGHV4-59P01825 116 aa12.54□□□□□ -0.4
SGPP1-201ENST00000247225 SS18L2Q9UHA2 77 aa12.54□□□□□ -0.4
SGPP1-201ENST00000247225 IGHV4-30-2A0A087WSY4 118 aa12.54□□□□□ -0.4
SGPP1-201ENST00000247225 TEX49A0A1B0GTD5 131 aa12.54□□□□□ -0.4
SGPP1-201ENST00000247225 SNRPD3P62318 126 aaKnown RBP12.54□□□□□ -0.4
SGPP1-201ENST00000247225 PAPPA-AS1Q5QFB9 102 aa12.54□□□□□ -0.4
SGPP1-201ENST00000247225 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
SGPP1-201ENST00000247225 KIF25-AS1Q9Y6Z4 181 aa12.53□□□□□ -0.4
SGPP1-201ENST00000247225 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
SGPP1-201ENST00000247225 ACANP16112 2415 aa12.53□□□□□ -0.4
SGPP1-201ENST00000247225 AVPP01185 164 aa12.53□□□□□ -0.4
SGPP1-201ENST00000247225 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
SGPP1-201ENST00000247225 TEX29Q8N6K0 151 aa12.52□□□□□ -0.4
SGPP1-201ENST00000247225 C3orf56Q8N813 242 aa12.52□□□□□ -0.41
SGPP1-201ENST00000247225 CCL19Q99731 98 aa12.52□□□□□ -0.41
SGPP1-201ENST00000247225 CLEC2BQ92478 149 aa12.51□□□□□ -0.41
SGPP1-201ENST00000247225 USMG5Q96IX5 58 aa12.51□□□□□ -0.41
SGPP1-201ENST00000247225 NF1P21359 2839 aa12.51□□□□□ -0.41
SGPP1-201ENST00000247225 PIMREGQ9BSJ6 248 aa12.51□□□□□ -0.41
SGPP1-201ENST00000247225 TNFRSF18Q9Y5U5 241 aa12.51□□□□□ -0.41
SGPP1-201ENST00000247225 IGHV1OR15-1A0A075B7D0 117 aa12.5□□□□□ -0.41
SGPP1-201ENST00000247225 B5MCH6 92 aa12.5□□□□□ -0.41
SGPP1-201ENST00000247225 M0QY20 66 aa12.5□□□□□ -0.41
SGPP1-201ENST00000247225 UBE2D3P61077 147 aa12.5□□□□□ -0.41
SGPP1-201ENST00000247225 UBE2D2P62837 147 aa12.5□□□□□ -0.41
SGPP1-201ENST00000247225 TMEM141Q96I45 108 aa12.5□□□□□ -0.41
SGPP1-201ENST00000247225 ZNF22P17026 224 aaPredicted RBP12.5□□□□□ -0.41
SGPP1-201ENST00000247225 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
SGPP1-201ENST00000247225 DGAT2L7PQ6IED9 249 aa12.5□□□□□ -0.41
SGPP1-201ENST00000247225 IGKV3OR2-268A0A0C4DH90 116 aa12.49□□□□□ -0.41
SGPP1-201ENST00000247225 SNCGO76070 127 aa12.49□□□□□ -0.41
SGPP1-201ENST00000247225 DEFB131AP59861 70 aa12.49□□□□□ -0.41
SGPP1-201ENST00000247225 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
SGPP1-201ENST00000247225 RHODO00212 210 aa12.49□□□□□ -0.41
SGPP1-201ENST00000247225 SCGB1A1P11684 91 aa12.49□□□□□ -0.41
SGPP1-201ENST00000247225 IGHG2P01859 326 aa12.49□□□□□ -0.41
SGPP1-201ENST00000247225 IGHV3-33P01772 117 aa12.48□□□□□ -0.41
SGPP1-201ENST00000247225 IGHV3-30-3P0DP02 117 aa12.48□□□□□ -0.41
SGPP1-201ENST00000247225 IGHV3-53P01767 116 aa12.48□□□□□ -0.41
SGPP1-201ENST00000247225 DCANP1Q8TF63 244 aa12.48□□□□□ -0.41
SGPP1-201ENST00000247225 ZNF462Q96JM2 2506 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms