RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 E7EUB6 86 aa10.08□□□□□ -0.8
COL1A1-201ENST00000225964 FAM222AQ5U5X8 452 aa10.08□□□□□ -0.8
COL1A1-201ENST00000225964 Q6ZUT4 128 aa10.08□□□□□ -0.8
COL1A1-201ENST00000225964 C11orf86A6NJI1 115 aa10.08□□□□□ -0.8
COL1A1-201ENST00000225964 GTF3C1Q12789 2109 aa10.08□□□□□ -0.8
COL1A1-201ENST00000225964 TMEM256-PLSCR3K7ERE1 68 aa10.08□□□□□ -0.8
COL1A1-201ENST00000225964 Q6YL49 198 aa10.07□□□□□ -0.8
COL1A1-201ENST00000225964 PLXNB3Q9ULL4 1909 aa10.07□□□□□ -0.8
COL1A1-201ENST00000225964 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.07□□□□□ -0.8
COL1A1-201ENST00000225964 Q8NA96 180 aa10.07□□□□□ -0.8
COL1A1-201ENST00000225964 ZNF106Q9H2Y7 1883 aaKnown RBP10.07□□□□□ -0.8
COL1A1-201ENST00000225964 CHD3Q12873 2000 aaKnown RBP10.07□□□□□ -0.8
COL1A1-201ENST00000225964 JMJD7-PLA2G4BH0Y9G9 81 aa10.07□□□□□ -0.8
COL1A1-201ENST00000225964 NOTCH4Q99466 2003 aa10.07□□□□□ -0.8
COL1A1-201ENST00000225964 ANKRD39Q53RE8 183 aa10.06□□□□□ -0.8
COL1A1-201ENST00000225964 IGHV1-58A0A0C4DH39 117 aa10.06□□□□□ -0.8
COL1A1-201ENST00000225964 TNFRSF13BO14836 293 aaPredicted RBP10.06□□□□□ -0.8
COL1A1-201ENST00000225964 OBSL1O75147 1896 aa10.06□□□□□ -0.8
COL1A1-201ENST00000225964 Q6ZTI0 123 aa10.06□□□□□ -0.8
COL1A1-201ENST00000225964 FAM167A-AS1Q96KT0 104 aa10.06□□□□□ -0.8
COL1A1-201ENST00000225964 ZGRF1Q86YA3 2104 aa10.06□□□□□ -0.8
COL1A1-201ENST00000225964 IGLV1-47P01700 117 aa10.06□□□□□ -0.8
COL1A1-201ENST00000225964 ZFAND2AQ8N6M9 145 aa10.05□□□□□ -0.8
COL1A1-201ENST00000225964 IGKV2D-26A0A0A0MRZ7 120 aa10.05□□□□□ -0.8
COL1A1-201ENST00000225964 TRBV10-2A0A0K0K1G8 114 aa10.05□□□□□ -0.8
COL1A1-201ENST00000225964 M0R2N4 97 aa10.05□□□□□ -0.8
COL1A1-201ENST00000225964 UBE2D1P51668 147 aa10.05□□□□□ -0.8
COL1A1-201ENST00000225964 HIST2H2BDQ6DRA6 164 aa10.05□□□□□ -0.8
COL1A1-201ENST00000225964 FAM19A5Q7Z5A7 132 aaPredicted RBP10.05□□□□□ -0.8
COL1A1-201ENST00000225964 KIR2DL5BQ8NHK3 375 aa10.05□□□□□ -0.8
COL1A1-201ENST00000225964 SS18L2Q9UHA2 77 aa10.05□□□□□ -0.8
COL1A1-201ENST00000225964 LINC00482Q8N8I6 264 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 ACACAQ13085 2346 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 LYRM9A8MSI8 78 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 C2orf16Q68DN1 1984 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 IGKV1D-37A0A075B6S9 117 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 ATOX1O00244 68 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 FAM236AA0A1B0GUQ0 79 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 FAM236BA0A1B0GV22 79 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 E9PLD3 99 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 CTRLP40313 264 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 C7orf33Q8WU49 177 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 IGLV2-18A0A075B6J9 118 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 SHISA2Q6UWI4 295 aa10.04□□□□□ -0.8
COL1A1-201ENST00000225964 GVINP1Q7Z2Y8 2422 aa10.03□□□□□ -0.8
COL1A1-201ENST00000225964 CCDC140Q96MF4 163 aa10.03□□□□□ -0.8
COL1A1-201ENST00000225964 WNK2Q9Y3S1 2297 aa10.03□□□□□ -0.8
COL1A1-201ENST00000225964 LINC01548A6NM66 108 aa10.03□□□□□ -0.8
COL1A1-201ENST00000225964 WISP2O76076 250 aa10.03□□□□□ -0.8
COL1A1-201ENST00000225964 UFSP1Q6NVU6 142 aa10.03□□□□□ -0.8
COL1A1-201ENST00000225964 CHCHD10Q8WYQ3 142 aaPredicted RBP10.03□□□□□ -0.8
COL1A1-201ENST00000225964 LY6G6DO95868 133 aa10.03□□□□□ -0.8
COL1A1-201ENST00000225964 SPANXCQ9NY87 97 aa10.02□□□□□ -0.8
COL1A1-201ENST00000225964 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.81
COL1A1-201ENST00000225964 B5MCH6 92 aa10.02□□□□□ -0.81
COL1A1-201ENST00000225964 FBXL19-AS1Q494R0 122 aa10.02□□□□□ -0.81
COL1A1-201ENST00000225964 ZNF843Q8N446 348 aa10.02□□□□□ -0.81
COL1A1-201ENST00000225964 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.81
COL1A1-201ENST00000225964 FXYD2P54710 66 aa10.01□□□□□ -0.81
COL1A1-201ENST00000225964 SMIM9A6NGZ8 99 aa10.01□□□□□ -0.81
COL1A1-201ENST00000225964 LY6G6CO95867 125 aa10.01□□□□□ -0.81
COL1A1-201ENST00000225964 NUPR1O60356 82 aa10□□□□□ -0.81
COL1A1-201ENST00000225964 IGLV2-14P01704 120 aa10□□□□□ -0.81
COL1A1-201ENST00000225964 CRYGBP07316 175 aa10□□□□□ -0.81
COL1A1-201ENST00000225964 DEFB114Q30KQ6 69 aa10□□□□□ -0.81
COL1A1-201ENST00000225964 C20orf203Q8NBC4 194 aa10□□□□□ -0.81
COL1A1-201ENST00000225964 SVIPQ8NHG7 77 aa10□□□□□ -0.81
COL1A1-201ENST00000225964 NDUFC2O95298 119 aa10□□□□□ -0.81
COL1A1-201ENST00000225964 LMO4P61968 165 aa10□□□□□ -0.81
COL1A1-201ENST00000225964 MSMPQ1L6U9 139 aa10□□□□□ -0.81
COL1A1-201ENST00000225964 KIAA1549LQ6ZVL6 1849 aa9.99□□□□□ -0.81
COL1A1-201ENST00000225964 PKDREJQ9NTG1 2253 aa9.99□□□□□ -0.81
COL1A1-201ENST00000225964 ODF3BA8MYP8 253 aa9.99□□□□□ -0.81
COL1A1-201ENST00000225964 CDPF1Q6NVV7 123 aa9.99□□□□□ -0.81
COL1A1-201ENST00000225964 UPK3BQ9BT76 320 aa9.99□□□□□ -0.81
COL1A1-201ENST00000225964 BPY2O14599 106 aa9.99□□□□□ -0.81
COL1A1-201ENST00000225964 HRCT1Q6UXD1 115 aa9.99□□□□□ -0.81
COL1A1-201ENST00000225964 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.99□□□□□ -0.81
COL1A1-201ENST00000225964 LINC00467Q9BRT7 94 aa9.99□□□□□ -0.81
COL1A1-201ENST00000225964 RIF1Q5UIP0 2472 aaKnown RBP9.98□□□□□ -0.81
COL1A1-201ENST00000225964 FOXI1Q12951 378 aa9.98□□□□□ -0.81
COL1A1-201ENST00000225964 MIAQ16674 131 aa9.98□□□□□ -0.81
COL1A1-201ENST00000225964 Q6ZSR3 168 aa9.98□□□□□ -0.81
COL1A1-201ENST00000225964 UBE2D4Q9Y2X8 147 aa9.98□□□□□ -0.81
COL1A1-201ENST00000225964 NCOR1O75376 2440 aa9.98□□□□□ -0.81
COL1A1-201ENST00000225964 C20orf173Q96LM9 149 aa9.97□□□□□ -0.81
COL1A1-201ENST00000225964 SMIM20Q8N5G0 67 aa9.97□□□□□ -0.81
COL1A1-201ENST00000225964 TRAV10A0A0B4J240 114 aa9.97□□□□□ -0.81
COL1A1-201ENST00000225964 ODF1Q14990 250 aa9.96□□□□□ -0.81
COL1A1-201ENST00000225964 WFDC2Q14508 124 aa9.96□□□□□ -0.81
COL1A1-201ENST00000225964 SPRY4Q9C004 299 aa9.96□□□□□ -0.81
COL1A1-201ENST00000225964 MIFP14174 115 aa9.96□□□□□ -0.82
COL1A1-201ENST00000225964 TEN1Q86WV5 123 aa9.96□□□□□ -0.82
COL1A1-201ENST00000225964 WFDC10BQ8IUB3 73 aa9.96□□□□□ -0.82
COL1A1-201ENST00000225964 Q6ZSV7 163 aa9.96□□□□□ -0.82
COL1A1-201ENST00000225964 KIR2DL5BA0A0G2JN68 375 aa9.95□□□□□ -0.82
COL1A1-201ENST00000225964 KIR2DL5BA0A0G2JPC4 375 aa9.95□□□□□ -0.82
COL1A1-201ENST00000225964 USP17L23D6RBM5 183 aa9.95□□□□□ -0.82
COL1A1-201ENST00000225964 ZNF80P51504 273 aaPredicted RBP9.95□□□□□ -0.82
COL1A1-201ENST00000225964 KIR2DL5AQ8N109 375 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms