RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 RPL36AP83881 106 aaKnown RBP16.28■□□□□ 0.2
HOMER3-201ENST00000221222 MRPL54Q6P161 138 aaKnown RBP16.28■□□□□ 0.2
HOMER3-201ENST00000221222 NEXN-AS1Q8NBZ9 246 aa16.28■□□□□ 0.2
HOMER3-201ENST00000221222 RPL36ALQ969Q0 106 aaKnown RBP16.28■□□□□ 0.2
HOMER3-201ENST00000221222 TRBV7-3A0A075B6L6 115 aa16.27■□□□□ 0.2
HOMER3-201ENST00000221222 SNAPINO95295 136 aa16.27■□□□□ 0.2
HOMER3-201ENST00000221222 HBBP68871 147 aa16.27■□□□□ 0.2
HOMER3-201ENST00000221222 ATP6V0E2Q8NHE4 81 aa16.27■□□□□ 0.2
HOMER3-201ENST00000221222 ZNRF2Q8NHG8 242 aa16.27■□□□□ 0.2
HOMER3-201ENST00000221222 FRZBQ92765 325 aa16.27■□□□□ 0.2
HOMER3-201ENST00000221222 MRPS16Q9Y3D3 137 aaKnown RBP16.27■□□□□ 0.2
HOMER3-201ENST00000221222 S100A8P05109 93 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 RASL11AQ6T310 242 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 UPK3BQ9BT76 320 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 CAMPP49913 170 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 UBE2D3P61077 147 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 UBE2D2P62837 147 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 KCNIP4Q6PIL6 250 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 GATD1Q8NB37 220 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 RNF185Q96GF1 192 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 BTF3L4Q96K17 158 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 DNAJC30Q96LL9 226 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 RPS10P5Q9NQ39 176 aa16.26■□□□□ 0.19
HOMER3-201ENST00000221222 AMN1Q8IY45 258 aa16.25■□□□□ 0.19
HOMER3-201ENST00000221222 TRAV9-1A0A075B6T8 112 aa16.24■□□□□ 0.19
HOMER3-201ENST00000221222 RAB4AP20338 218 aa16.24■□□□□ 0.19
HOMER3-201ENST00000221222 GTSF1LQ9H1H1 148 aa16.24■□□□□ 0.19
HOMER3-201ENST00000221222 TRAV26-2A0A0B4J265 109 aa16.23■□□□□ 0.19
HOMER3-201ENST00000221222 FAM104BQ5XKR9 115 aa16.23■□□□□ 0.19
HOMER3-201ENST00000221222 NIT2Q9NQR4 276 aa16.23■□□□□ 0.19
HOMER3-201ENST00000221222 S100PP25815 95 aa16.21■□□□□ 0.19
HOMER3-201ENST00000221222 MRAP2Q96G30 205 aa16.21■□□□□ 0.19
HOMER3-201ENST00000221222 TNFRSF18Q9Y5U5 241 aa16.21■□□□□ 0.19
HOMER3-201ENST00000221222 KMT2AQ03164 3969 aa16.2■□□□□ 0.18
HOMER3-201ENST00000221222 LELP1Q5T871 98 aa16.19■□□□□ 0.18
HOMER3-201ENST00000221222 DAZ4Q86SG3 579 aaKnown RBP16.18■□□□□ 0.18
HOMER3-201ENST00000221222 DAZ3Q9NR90 486 aaKnown RBP16.18■□□□□ 0.18
HOMER3-201ENST00000221222 MRPL51Q4U2R6 128 aaKnown RBP16.17■□□□□ 0.18
HOMER3-201ENST00000221222 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.17■□□□□ 0.18
HOMER3-201ENST00000221222 RPL39LQ96EH5 51 aaKnown RBP16.17■□□□□ 0.18
HOMER3-201ENST00000221222 Q9H8V8 135 aa16.17■□□□□ 0.18
HOMER3-201ENST00000221222 URGCP-MRPS24S4R325 110 aa16.17■□□□□ 0.18
HOMER3-201ENST00000221222 FRAS1Q86XX4 4008 aa16.16■□□□□ 0.18
HOMER3-201ENST00000221222 GAS8-AS1O95177 125 aa16.16■□□□□ 0.18
HOMER3-201ENST00000221222 TRBV6-5A0A0K0K1A5 114 aa16.15■□□□□ 0.18
HOMER3-201ENST00000221222 IGHV3-38A0A0C4DH36 116 aa16.14■□□□□ 0.17
HOMER3-201ENST00000221222 SIVA1O15304 175 aa16.14■□□□□ 0.17
HOMER3-201ENST00000221222 OR10J3Q5JRS4 329 aa16.14■□□□□ 0.17
HOMER3-201ENST00000221222 ATRAIDQ6UW56 229 aa16.14■□□□□ 0.17
HOMER3-201ENST00000221222 TRAV8-6A0A0B4J262 113 aa16.13■□□□□ 0.17
HOMER3-201ENST00000221222 RPS10P46783 165 aaKnown RBP16.13■□□□□ 0.17
HOMER3-201ENST00000221222 TMEM97Q5BJF2 176 aa16.13■□□□□ 0.17
HOMER3-201ENST00000221222 WFDC10BQ8IUB3 73 aa16.13■□□□□ 0.17
HOMER3-201ENST00000221222 DNAH6Q9C0G6 4158 aa16.13■□□□□ 0.17
HOMER3-201ENST00000221222 SMKR1H3BMG3 65 aa16.13■□□□□ 0.17
HOMER3-201ENST00000221222 NCR2O95944 276 aa16.13■□□□□ 0.17
HOMER3-201ENST00000221222 PPP1R17O96001 155 aa16.13■□□□□ 0.17
HOMER3-201ENST00000221222 IGLV2-18A0A075B6J9 118 aa16.12■□□□□ 0.17
HOMER3-201ENST00000221222 TRBV6-8A0A0A6YYG3 113 aa16.12■□□□□ 0.17
HOMER3-201ENST00000221222 CKS2P33552 79 aa16.12■□□□□ 0.17
HOMER3-201ENST00000221222 TMEM136Q6ZRR5 245 aa16.12■□□□□ 0.17
HOMER3-201ENST00000221222 NRACQ8N912 160 aa16.12■□□□□ 0.17
HOMER3-201ENST00000221222 DNAH10Q8IVF4 4471 aa16.12■□□□□ 0.17
HOMER3-201ENST00000221222 PPBPP02775 128 aa16.11■□□□□ 0.17
HOMER3-201ENST00000221222 SDHAF1A6NFY7 115 aa16.1■□□□□ 0.17
HOMER3-201ENST00000221222 DNAH10OSP0CZ25 163 aa16.1■□□□□ 0.17
HOMER3-201ENST00000221222 ELOBQ15370 118 aa16.1■□□□□ 0.17
HOMER3-201ENST00000221222 Q6ZR54 194 aa16.1■□□□□ 0.17
HOMER3-201ENST00000221222 NTM-AS1Q6ZSK4 140 aa16.1■□□□□ 0.17
HOMER3-201ENST00000221222 ST20Q9HBF5 79 aa16.1■□□□□ 0.17
HOMER3-201ENST00000221222 TRBV24-1A0A075B6N3 115 aa16.09■□□□□ 0.17
HOMER3-201ENST00000221222 NBDYA0A0U1RRE5 68 aa16.09■□□□□ 0.17
HOMER3-201ENST00000221222 D6R8Y8 96 aa16.09■□□□□ 0.17
HOMER3-201ENST00000221222 COX19Q49B96 90 aa16.09■□□□□ 0.17
HOMER3-201ENST00000221222 POLR2KP53803 58 aaKnown RBP16.08■□□□□ 0.16
HOMER3-201ENST00000221222 TMEM70Q9BUB7 260 aa16.08■□□□□ 0.16
HOMER3-201ENST00000221222 ORMDL3Q8N138 153 aa16.07■□□□□ 0.16
HOMER3-201ENST00000221222 GNB1LQ9BYB4 327 aa16.07■□□□□ 0.16
HOMER3-201ENST00000221222 PHOX2AO14813 284 aa16.06■□□□□ 0.16
HOMER3-201ENST00000221222 HLA-DQA1P01909 254 aa16.06■□□□□ 0.16
HOMER3-201ENST00000221222 SUMO2P61956 95 aaKnown RBP16.06■□□□□ 0.16
HOMER3-201ENST00000221222 COTL1Q14019 142 aa16.06■□□□□ 0.16
HOMER3-201ENST00000221222 IQCJQ1A5X6 159 aa16.06■□□□□ 0.16
HOMER3-201ENST00000221222 TTC32Q5I0X7 151 aa16.06■□□□□ 0.16
HOMER3-201ENST00000221222 LINC01556Q5JQF7 62 aa16.06■□□□□ 0.16
HOMER3-201ENST00000221222 TRBV25-1A0A075B6N4 114 aa16.05■□□□□ 0.16
HOMER3-201ENST00000221222 TGIF2-C20orf24A0A0A6YYL0 155 aa16.05■□□□□ 0.16
HOMER3-201ENST00000221222 TRBV27A0A0K0K1C4 114 aa16.05■□□□□ 0.16
HOMER3-201ENST00000221222 K7EP13 123 aa16.05■□□□□ 0.16
HOMER3-201ENST00000221222 M0R2N4 97 aa16.05■□□□□ 0.16
HOMER3-201ENST00000221222 TNFRSF6BO95407 300 aa16.05■□□□□ 0.16
HOMER3-201ENST00000221222 YPEL4Q96NS1 127 aa16.05■□□□□ 0.16
HOMER3-201ENST00000221222 C20orf78Q9BR46 151 aa16.05■□□□□ 0.16
HOMER3-201ENST00000221222 IGHV1-24A0A0C4DH33 117 aa16.04■□□□□ 0.16
HOMER3-201ENST00000221222 I3L3M4 83 aa16.04■□□□□ 0.16
HOMER3-201ENST00000221222 KRTAP1-5Q9BYS1 174 aa16.04■□□□□ 0.16
HOMER3-201ENST00000221222 SMCO4Q9NRQ5 59 aa16.04■□□□□ 0.16
HOMER3-201ENST00000221222 NPYP01303 97 aa16.03■□□□□ 0.16
HOMER3-201ENST00000221222 MT-ND6P03923 174 aa16.03■□□□□ 0.16
HOMER3-201ENST00000221222 PMCHP20382 165 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 1496.1 ms