RNA–Protein interactions for RNA: ENST00000159111.8

KDM4B-201, Transcript of lysine demethylase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4B, Length 5,593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-201ENST00000159111 IGHV3-30-3P0DP02 117 aa12.96□□□□□ -0.33
KDM4B-201ENST00000159111 IGHV3-30-5P0DP03 117 aa12.96□□□□□ -0.33
KDM4B-201ENST00000159111 FXYD2P54710 66 aa12.96□□□□□ -0.34
KDM4B-201ENST00000159111 DOCK10Q96BY6 2186 aa12.95□□□□□ -0.34
KDM4B-201ENST00000159111 IGHV1-58A0A0C4DH39 117 aa12.95□□□□□ -0.34
KDM4B-201ENST00000159111 RBM3P98179 157 aaKnown RBP12.95□□□□□ -0.34
KDM4B-201ENST00000159111 CADP27708 2225 aa12.95□□□□□ -0.34
KDM4B-201ENST00000159111 IGHV4-31P0DP07 118 aa12.95□□□□□ -0.34
KDM4B-201ENST00000159111 NDUFA11Q86Y39 141 aa12.95□□□□□ -0.34
KDM4B-201ENST00000159111 IGLV10-54A0A075B6I4 117 aa12.94□□□□□ -0.34
KDM4B-201ENST00000159111 LINC01548A6NM66 108 aa12.94□□□□□ -0.34
KDM4B-201ENST00000159111 NDUFA1O15239 70 aa12.94□□□□□ -0.34
KDM4B-201ENST00000159111 ETDCA0A1B0GVM5 59 aa12.94□□□□□ -0.34
KDM4B-201ENST00000159111 WNK2Q9Y3S1 2297 aa12.94□□□□□ -0.34
KDM4B-201ENST00000159111 LINC00322Q6ZN03 302 aaPredicted RBP12.94□□□□□ -0.34
KDM4B-201ENST00000159111 SHANK1Q9Y566 2161 aa12.94□□□□□ -0.34
KDM4B-201ENST00000159111 SPANXCQ9NY87 97 aa12.93□□□□□ -0.34
KDM4B-201ENST00000159111 OPRPNQ99935 248 aaPredicted RBP12.92□□□□□ -0.34
KDM4B-201ENST00000159111 LINC01620Q4KN68 170 aa12.92□□□□□ -0.34
KDM4B-201ENST00000159111 ABCA4P78363 2273 aa12.92□□□□□ -0.34
KDM4B-201ENST00000159111 CRYBA4P53673 196 aa12.92□□□□□ -0.34
KDM4B-201ENST00000159111 F8W735 103 aaPredicted RBP12.91□□□□□ -0.34
KDM4B-201ENST00000159111 TAX1BP3O14907 124 aa12.91□□□□□ -0.34
KDM4B-201ENST00000159111 DEFB135Q30KP9 77 aa12.91□□□□□ -0.34
KDM4B-201ENST00000159111 PRO0255Q9UI72 69 aa12.91□□□□□ -0.34
KDM4B-201ENST00000159111 K7EQG2 157 aa12.91□□□□□ -0.34
KDM4B-201ENST00000159111 MBD6Q96DN6 1003 aa12.91□□□□□ -0.34
KDM4B-201ENST00000159111 ARFGEF3Q5TH69 2177 aa12.91□□□□□ -0.34
KDM4B-201ENST00000159111 TIRAPP58753 221 aa12.91□□□□□ -0.34
KDM4B-201ENST00000159111 ZFAND3Q9H8U3 227 aa12.91□□□□□ -0.34
KDM4B-201ENST00000159111 GDF5OSQ5U4N7 250 aa12.9□□□□□ -0.34
KDM4B-201ENST00000159111 TEN1Q86WV5 123 aa12.89□□□□□ -0.35
KDM4B-201ENST00000159111 DEFB105AQ8NG35 78 aa12.89□□□□□ -0.35
KDM4B-201ENST00000159111 FUSP35637 526 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■■■□□ 15.9
KDM4B-201ENST00000159111 TTTY13Q9BZ97 58 aa12.89□□□□□ -0.35
KDM4B-201ENST00000159111 SMAD5-AS1Q9Y6J3 95 aa12.89□□□□□ -0.35
KDM4B-201ENST00000159111 C5orf47Q569G3 176 aa12.89□□□□□ -0.35
KDM4B-201ENST00000159111 A0A0B4J2C4 111 aa12.88□□□□□ -0.35
KDM4B-201ENST00000159111 NDUFC2O95298 119 aa12.88□□□□□ -0.35
KDM4B-201ENST00000159111 C20orf173Q96LM9 149 aa12.88□□□□□ -0.35
KDM4B-201ENST00000159111 hADV29S1A0JD25 119 aa12.88□□□□□ -0.35
KDM4B-201ENST00000159111 TM2D2Q9BX73 214 aa12.88□□□□□ -0.35
KDM4B-201ENST00000159111 ESM1Q9NQ30 184 aa12.87□□□□□ -0.35
KDM4B-201ENST00000159111 TP53TG3Q9ULZ0 132 aa12.87□□□□□ -0.35
KDM4B-201ENST00000159111 CEP192Q8TEP8 1941 aa12.87□□□□□ -0.35
KDM4B-201ENST00000159111 H7C423 109 aa12.87□□□□□ -0.35
KDM4B-201ENST00000159111 DAND5Q8N907 189 aa12.87□□□□□ -0.35
KDM4B-201ENST00000159111 SPAG11BQ08648 103 aa12.87□□□□□ -0.35
KDM4B-201ENST00000159111 TRBV10-2A0A0K0K1G8 114 aa12.86□□□□□ -0.35
KDM4B-201ENST00000159111 SMIM9A6NGZ8 99 aa12.86□□□□□ -0.35
KDM4B-201ENST00000159111 DEFB114Q30KQ6 69 aa12.86□□□□□ -0.35
KDM4B-201ENST00000159111 Q6ZUT4 128 aa12.86□□□□□ -0.35
KDM4B-201ENST00000159111 NFE4Q86UQ8 179 aa12.86□□□□□ -0.35
KDM4B-201ENST00000159111 NCR3O14931 201 aa12.86□□□□□ -0.35
KDM4B-201ENST00000159111 PCDH15Q96QU1 1955 aa12.85□□□□□ -0.35
KDM4B-201ENST00000159111 RS1O15537 224 aa12.85□□□□□ -0.35
KDM4B-201ENST00000159111 U3KQK5 164 aa12.85□□□□□ -0.35
KDM4B-201ENST00000159111 Q8N6K4 173 aa12.85□□□□□ -0.35
KDM4B-201ENST00000159111 CACNA1HO95180 2353 aa12.85□□□□□ -0.35
KDM4B-201ENST00000159111 H3BT86 120 aa12.85□□□□□ -0.35
KDM4B-201ENST00000159111 MIAQ16674 131 aa12.85□□□□□ -0.35
KDM4B-201ENST00000159111 PLA2G5P39877 138 aa12.85□□□□□ -0.35
KDM4B-201ENST00000159111 JMJD7-PLA2G4BH0Y9G9 81 aa12.84□□□□□ -0.35
KDM4B-201ENST00000159111 IGHV4-4A0A075B6R2 117 aa12.84□□□□□ -0.35
KDM4B-201ENST00000159111 NCOA6Q14686 2063 aaPredicted RBP12.84□□□□□ -0.35
KDM4B-201ENST00000159111 LYRM9A8MSI8 78 aa12.83□□□□□ -0.35
KDM4B-201ENST00000159111 MIR7-3HGQ8N6C7 128 aa12.83□□□□□ -0.35
KDM4B-201ENST00000159111 NEXN-AS1Q8NBZ9 246 aa12.83□□□□□ -0.35
KDM4B-201ENST00000159111 YPEL4Q96NS1 127 aa12.83□□□□□ -0.35
KDM4B-201ENST00000159111 PCNX1Q96RV3 2341 aa12.83□□□□□ -0.36
KDM4B-201ENST00000159111 DEFB4AO15263 64 aa12.82□□□□□ -0.36
KDM4B-201ENST00000159111 KLK12Q9UKR0 248 aa12.82□□□□□ -0.36
KDM4B-201ENST00000159111 DIRC1Q969H9 104 aa12.82□□□□□ -0.36
KDM4B-201ENST00000159111 ZFAND2AQ8N6M9 145 aa12.81□□□□□ -0.36
KDM4B-201ENST00000159111 Q6ZTI0 123 aa12.81□□□□□ -0.36
KDM4B-201ENST00000159111 CRIP1P50238 77 aa12.81□□□□□ -0.36
KDM4B-201ENST00000159111 FOXI1Q12951 378 aa12.81□□□□□ -0.36
KDM4B-201ENST00000159111 WFDC2Q14508 124 aa12.81□□□□□ -0.36
KDM4B-201ENST00000159111 KLK5Q9Y337 293 aaPredicted RBP12.81□□□□□ -0.36
KDM4B-201ENST00000159111 J3KT08 172 aa12.8□□□□□ -0.36
KDM4B-201ENST00000159111 P0DMU3 169 aa12.8□□□□□ -0.36
KDM4B-201ENST00000159111 FAM231AP0DMU4 169 aa12.8□□□□□ -0.36
KDM4B-201ENST00000159111 FAM231CP0DMU5 169 aa12.8□□□□□ -0.36
KDM4B-201ENST00000159111 FREM1Q5H8C1 2179 aa12.8□□□□□ -0.36
KDM4B-201ENST00000159111 A0A0J9YXY3 114 aa12.8□□□□□ -0.36
KDM4B-201ENST00000159111 CEMP1Q6PRD7 247 aaPredicted RBP12.8□□□□□ -0.36
KDM4B-201ENST00000159111 PSMG3-AS1Q96PY0 264 aa12.79□□□□□ -0.36
KDM4B-201ENST00000159111 LECT2O14960 151 aa12.79□□□□□ -0.36
KDM4B-201ENST00000159111 IGLV2-11P01706 119 aa12.79□□□□□ -0.36
KDM4B-201ENST00000159111 CLEC2BQ92478 149 aa12.79□□□□□ -0.36
KDM4B-201ENST00000159111 PSMB8P28062 276 aa12.78□□□□□ -0.36
KDM4B-201ENST00000159111 LRP4O75096 1905 aa12.78□□□□□ -0.36
KDM4B-201ENST00000159111 RNF185Q96GF1 192 aa12.78□□□□□ -0.36
KDM4B-201ENST00000159111 TMEM256-PLSCR3K7ERE1 68 aa12.78□□□□□ -0.36
KDM4B-201ENST00000159111 SVIPQ8NHG7 77 aa12.78□□□□□ -0.36
KDM4B-201ENST00000159111 WFDC11Q8NEX6 87 aa12.78□□□□□ -0.36
KDM4B-201ENST00000159111 Q6ZSV7 163 aa12.77□□□□□ -0.36
KDM4B-201ENST00000159111 CHD3Q12873 2000 aaKnown RBP12.77□□□□□ -0.37
KDM4B-201ENST00000159111 LINC00467Q9BRT7 94 aa12.77□□□□□ -0.37
KDM4B-201ENST00000159111 SRCAPQ6ZRS2 3230 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms