RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Ubald1Q6P3B2 176 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Epdr1Q99M71 224 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Qrich2A0A140LIY9 2337 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Platr25A0A1Y7VIZ1 466 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Fgfbp1O70514 251 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 ParlQ5XJY4 377 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Nhlh2Q64221 135 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Olfr399Q7TRX3 311 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Zc2hc1aQ8BJH1 324 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Smco3Q8BQM7 225 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Rnf182Q8C432 247 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Ndufs8Q8K3J1 212 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Olfr1440Q8VFV4 315 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Mpv17lQ99MS3 194 aa18.37■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Trav12d-1A0N8R0 115 aa18.36■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Vmn1r113G3UWI8 307 aa18.36■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Pde6dO55057 150 aa18.36■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Npy1rQ04573 382 aa18.36■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Adora3Q61618 319 aa18.36■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Gm26566Q8CAC1 153 aa18.36■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Cmtm2bQ9DAC0 210 aa18.36■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Smim6Q3U0I6 56 aa18.35■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Ms4a3Q920C4 213 aa18.35■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Arid1bE9Q4N7 2244 aa18.35■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Mgst2A2RST1 147 aa18.35■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Rab24P35290 203 aa18.35■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Rnase11Q5GAM9 192 aa18.35■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Ppp1r14aQ91VC7 147 aa18.35■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Gm10306Q9CUK2 115 aa18.35■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Ammecr1Q9JHT5 344 aaKnown RBP18.35■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Olfr282A1L1B4 308 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Gm6904E9PVF1 202 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 MidnQ3TPJ7 465 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Tgfbr1Q64729 503 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Olfr1386Q7TQT0 309 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Olfr43Q7TRX1 313 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Olfr403Q7TRX2 313 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Olfr1155Q8VFR3 314 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Olfr1228Q8VGM9 323 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Bpifa5Q9CQX3 270 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Rnf125Q9D9R0 233 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Olfr177E9Q7W1 309 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Rps16P14131 146 aaKnown RBP18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Rhox4gQ2MDF7 205 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Rhox4dQ2MDG0 205 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Rhox4eQ504P9 205 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Gm9958Q8C9U4 106 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Sfxn4Q925N1 313 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Rhox4bQ9JI43 205 aa18.34■□□□□ 0.53
Upf3a-201ENSMUST00000043767 Trav6d-3A0A075B6B3 112 aa18.33■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Scgb1b10A0A087WPW0 93 aa18.33■□□□□ 0.52
Upf3a-201ENSMUST00000043767 GzmfP08883 248 aa18.33■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Trav6-3Q5R1E6 112 aa18.33■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr877Q8VF62 311 aa18.33■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr338Q8VGK6 306 aa18.33■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Cma2Q91VB1 246 aa18.33■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Dram1Q9DC58 238 aa18.33■□□□□ 0.52
Upf3a-201ENSMUST00000043767 A0A286YDM5 308 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr39E9PVX1 319 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Zfp867E9Q2M4 473 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Gm10203F6QJ09 66 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Cd79bP15530 228 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Prok1Q14A28 105 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Bud31Q6PGH1 103 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Vma21Q78T54 101 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 AmtQ8CFA2 403 aaKnown RBP18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr960Q8VET5 316 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr123Q8VFQ1 309 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Hsd17b6Q9R092 317 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Timm23Q9WTQ8 209 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 AcanQ61282 2132 aaKnown RBP18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr1326-ps1A0A140T8J7 311 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Tpt1P63028 172 aaKnown RBP18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Mbd3l2Q3UXB0 228 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr473Q8VG44 310 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Scgb3a2Q920H1 91 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Ociad1Q9CRD0 247 aaKnown RBP18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Trem3Q9JKE1 183 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Vsig2Q9Z109 328 aa18.32■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Gm5239D3YYZ2 122 aa18.31■□□□□ 0.52
Upf3a-201ENSMUST00000043767 P01796 113 aa18.31■□□□□ 0.52
Upf3a-201ENSMUST00000043767 P01797 113 aa18.31■□□□□ 0.52
Upf3a-201ENSMUST00000043767 P01799 113 aa18.31■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Cd3eP22646 189 aa18.31■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr1183Q8VFF8 303 aa18.31■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Ccl28Q9JIL2 130 aa18.31■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Dido1Q8C9B9 2256 aaKnown RBP18.31■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Gm20532G3UXR8 106 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Oprk1P33534 380 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 TdhQ8K3F7 373 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr1009Q8VFK1 314 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Btf3l4Q9CQH7 158 aaKnown RBP18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Cox20Q9D7J4 117 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 LrbaQ9ESE1 2856 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Akap6E9Q9K8 2307 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Zfp971A2BFG8 470 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Olfr196E9PYP4 309 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 E430018J23RikE9PZQ8 461 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Gm14288E9Q9W0 88 aa18.3■□□□□ 0.52
Upf3a-201ENSMUST00000043767 Lgals9O08573 353 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms