RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
RGPD1-206ENST00000641458 PDZD11Q5EBL8 140 aa4.39□□□□□ -1.71
RGPD1-206ENST00000641458 G3V4G9 280 aa4.39□□□□□ -1.71
RGPD1-206ENST00000641458 RPL11P62913 178 aaKnown RBP4.39□□□□□ -1.71
RGPD1-206ENST00000641458 ODF1Q14990 250 aa4.39□□□□□ -1.71
RGPD1-206ENST00000641458 MRPL51Q4U2R6 128 aaKnown RBP4.39□□□□□ -1.71
RGPD1-206ENST00000641458 TRAV12-3A0A0B4J271 114 aa4.39□□□□□ -1.71
RGPD1-206ENST00000641458 GNRH2O43555 120 aa4.39□□□□□ -1.71
RGPD1-206ENST00000641458 BTF3P20290 206 aaKnown RBP4.38□□□□□ -1.71
RGPD1-206ENST00000641458 TCTAP57738 103 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 SBSPONQ8IVN8 264 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 C18orf32Q8TCD1 76 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 MRPL18Q9H0U6 180 aaKnown RBP4.38□□□□□ -1.71
RGPD1-206ENST00000641458 TIMM8BQ9Y5J9 83 aaPredicted RBP4.38□□□□□ -1.71
RGPD1-206ENST00000641458 TMEM88Q6PEY1 159 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 CA1P00915 261 aaPredicted RBP4.38□□□□□ -1.71
RGPD1-206ENST00000641458 FRMD6-AS1P0C7T7 363 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 TMEM97Q5BJF2 176 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 SH2D6Q7Z4S9 175 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 SPATA25Q9BR10 227 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 PYGO1Q9Y3Y4 419 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 MEGF8Q7Z7M0 2845 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 AZU1P20160 251 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 OXLD1Q5BKU9 147 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 BORCS7Q96B45 105 aa4.38□□□□□ -1.71
RGPD1-206ENST00000641458 SCO1O75880 301 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 ORM1P02763 201 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 RHOHQ15669 191 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 ORMDL3Q8N138 153 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 NXT2Q9NPJ8 142 aaKnown RBP4.37□□□□□ -1.71
RGPD1-206ENST00000641458 FHL2Q14192 279 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 RRN3P1Q2M238 152 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 MRPL52Q86TS9 123 aaKnown RBP4.37□□□□□ -1.71
RGPD1-206ENST00000641458 Q8N8P6 123 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 RCHY1Q96PM5 261 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 SNRPCP09234 159 aaKnown RBP4.37□□□□□ -1.71
RGPD1-206ENST00000641458 HIST2H2BDQ6DRA6 164 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 WFDC10AQ9H1F0 79 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 APCSP02743 223 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 ZMAT4Q9H898 229 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 A0A096LNJ9 63 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 H7C1H1 209 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 AKR1D1P51857 326 aa4.37□□□□□ -1.71
RGPD1-206ENST00000641458 C1orf196B1AJZ1 125 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 SNURFLB1AK76 121 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 TRGC2P03986 189 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 NIT2Q9NQR4 276 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 TRAPPC1Q9Y5R8 145 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 ALMS1Q8TCU4 4167 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 TRAV12-2A0A075B6T6 113 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 H3BVH4 76 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 G0S2P27469 103 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 RAB5BP61020 215 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 RPH3ALQ9UNE2 315 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 K7EP13 123 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 GZMBP10144 247 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 UBE2D3P61077 147 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 UBE2D2P62837 147 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 CHCHD7Q9BUK0 85 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 MSRB1Q9NZV6 116 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 PHLDA3Q9Y5J5 127 aa4.36□□□□□ -1.71
RGPD1-206ENST00000641458 MRPS36P82909 103 aaKnown RBP4.36□□□□□ -1.71
RGPD1-206ENST00000641458 HIST3H2BBQ8N257 126 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 ZNF876PQ49A33 203 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 DAZ4Q86SG3 579 aaKnown RBP4.35□□□□□ -1.71
RGPD1-206ENST00000641458 LINC01587Q99440 93 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 SMIM2Q9BVW6 85 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 DAZ3Q9NR90 486 aaKnown RBP4.35□□□□□ -1.71
RGPD1-206ENST00000641458 WNK1Q9H4A3 2382 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 IGHV4-28A0A0C4DH34 117 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 IFITM10A6NMD0 228 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 IQCJQ1A5X6 159 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 SUMO4Q6EEV6 95 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 FAM104AQ969W3 186 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 XCL2Q9UBD3 114 aa4.35□□□□□ -1.71
RGPD1-206ENST00000641458 LOC105371267A0A1B0GV96 52 aa4.34□□□□□ -1.71
RGPD1-206ENST00000641458 UPK3BQ9BT76 320 aa4.34□□□□□ -1.71
RGPD1-206ENST00000641458 TNFRSF6BO95407 300 aa4.34□□□□□ -1.71
RGPD1-206ENST00000641458 EVI2AP22794 236 aa4.34□□□□□ -1.71
RGPD1-206ENST00000641458 LINC01561Q8N1V8 128 aa4.34□□□□□ -1.71
RGPD1-206ENST00000641458 SPART-AS1P0CW21 52 aa4.34□□□□□ -1.71
RGPD1-206ENST00000641458 SUMO2P61956 95 aaKnown RBP4.34□□□□□ -1.71
RGPD1-206ENST00000641458 TIMM17AQ99595 171 aa4.34□□□□□ -1.71
RGPD1-206ENST00000641458 JMJD1CQ15652 2540 aa4.34□□□□□ -1.72
RGPD1-206ENST00000641458 FABP9Q0Z7S8 132 aa4.34□□□□□ -1.72
RGPD1-206ENST00000641458 SMIM15Q7Z3B0 74 aa4.34□□□□□ -1.72
RGPD1-206ENST00000641458 TMEM70Q9BUB7 260 aa4.34□□□□□ -1.72
RGPD1-206ENST00000641458 PPDPFQ9H3Y8 114 aa4.34□□□□□ -1.72
RGPD1-206ENST00000641458 TRAV12-1A0A0B4J245 112 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 A0A1B0GUV1 79 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 SPANXN1Q5VSR9 72 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 IGKV3-7A0A075B6H7 116 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 GRIFINA4D1Z8 144 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 CCL25O15444 150 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 PKIAP61925 76 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 C12orf74Q32Q52 190 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 NEXN-AS1Q8NBZ9 246 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 TOMM6Q96B49 74 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 VCYO14598 125 aa4.33□□□□□ -1.72
RGPD1-206ENST00000641458 TWIST1Q15672 202 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms