RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 WFDC1Q9HC57 220 aa9.41□□□□□ -0.9
PNKP-218ENST00000625299 IL36BQ9NZH7 164 aa9.41□□□□□ -0.9
PNKP-218ENST00000625299 RPL12P30050 165 aaKnown RBP9.4□□□□□ -0.9
PNKP-218ENST00000625299 MPV17L2Q567V2 206 aa9.4□□□□□ -0.9
PNKP-218ENST00000625299 MZT2BQ6NZ67 158 aa9.4□□□□□ -0.9
PNKP-218ENST00000625299 EPDR1Q9UM22 224 aa9.4□□□□□ -0.9
PNKP-218ENST00000625299 TRAV34A0A0B4J273 112 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 GRIFINA4D1Z8 144 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 FABP5P3A8MUU1 101 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 M0R036 132 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 M0R381 172 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 GCHFRP30047 84 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 UBE2D3P61077 147 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 UBE2D2P62837 147 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 CLPSL2Q6UWE3 100 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 DPH3Q96FX2 82 aa9.39□□□□□ -0.91
PNKP-218ENST00000625299 TRBV6-8A0A0A6YYG3 113 aa9.38□□□□□ -0.91
PNKP-218ENST00000625299 MPC2O95563 127 aa9.38□□□□□ -0.91
PNKP-218ENST00000625299 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
PNKP-218ENST00000625299 STAG3L3P0CL85 134 aa9.38□□□□□ -0.91
PNKP-218ENST00000625299 PET100P0DJ07 73 aa9.38□□□□□ -0.91
PNKP-218ENST00000625299 H2BFSP57053 126 aa9.38□□□□□ -0.91
PNKP-218ENST00000625299 SFRP2Q96HF1 295 aa9.38□□□□□ -0.91
PNKP-218ENST00000625299 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
PNKP-218ENST00000625299 ARL2-SNX15V9GYD0 113 aa9.38□□□□□ -0.91
PNKP-218ENST00000625299 TRBV7-3A0A075B6L6 115 aa9.37□□□□□ -0.91
PNKP-218ENST00000625299 TRBV10-1A0A0K0K1A3 114 aa9.37□□□□□ -0.91
PNKP-218ENST00000625299 RPL19P84098 196 aaKnown RBP9.37□□□□□ -0.91
PNKP-218ENST00000625299 MIAQ16674 131 aa9.37□□□□□ -0.91
PNKP-218ENST00000625299 SDIM1Q6ZPB5 146 aa9.37□□□□□ -0.91
PNKP-218ENST00000625299 HSD17B11Q8NBQ5 300 aa9.37□□□□□ -0.91
PNKP-218ENST00000625299 ENKURQ8TC29 256 aa9.37□□□□□ -0.91
PNKP-218ENST00000625299 RAB24Q969Q5 203 aa9.37□□□□□ -0.91
PNKP-218ENST00000625299 CHCHD5Q9BSY4 110 aa9.37□□□□□ -0.91
PNKP-218ENST00000625299 CCDC32Q9BV29 185 aa9.37□□□□□ -0.91
PNKP-218ENST00000625299 TMSB15BA0A087X1C1 80 aa9.36□□□□□ -0.91
PNKP-218ENST00000625299 PTTG1O95997 202 aa9.36□□□□□ -0.91
PNKP-218ENST00000625299 TPT1P13693 172 aaKnown RBP9.36□□□□□ -0.91
PNKP-218ENST00000625299 ODF1Q14990 250 aa9.36□□□□□ -0.91
PNKP-218ENST00000625299 KRBOX1C9JBD0 128 aa9.35□□□□□ -0.91
PNKP-218ENST00000625299 SUN5Q8TC36 379 aa9.35□□□□□ -0.91
PNKP-218ENST00000625299 TMEM167BQ9NRX6 74 aa9.35□□□□□ -0.91
PNKP-218ENST00000625299 SH2D1AO60880 128 aa9.34□□□□□ -0.91
PNKP-218ENST00000625299 IFNA7P01567 189 aa9.34□□□□□ -0.91
PNKP-218ENST00000625299 CHTF8P0CG12 524 aa9.34□□□□□ -0.91
PNKP-218ENST00000625299 ZNF56Q15929 161 aa9.34□□□□□ -0.91
PNKP-218ENST00000625299 Q86TA4 180 aa9.34□□□□□ -0.91
PNKP-218ENST00000625299 ZFP82Q8N141 532 aa9.34□□□□□ -0.91
PNKP-218ENST00000625299 A0A087WYN8 130 aa9.33□□□□□ -0.92
PNKP-218ENST00000625299 hDV102S1A0JD36 115 aa9.33□□□□□ -0.92
PNKP-218ENST00000625299 SSNA1O43805 119 aa9.33□□□□□ -0.92
PNKP-218ENST00000625299 CXorf1O96002 111 aa9.33□□□□□ -0.92
PNKP-218ENST00000625299 CRIP1P50238 77 aa9.33□□□□□ -0.92
PNKP-218ENST00000625299 PKIAP61925 76 aa9.33□□□□□ -0.92
PNKP-218ENST00000625299 LINC00269Q8N2A0 174 aa9.33□□□□□ -0.92
PNKP-218ENST00000625299 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
PNKP-218ENST00000625299 OR10G8Q8NGN5 311 aa9.33□□□□□ -0.92
PNKP-218ENST00000625299 IGLV10-54A0A075B6I4 117 aa9.32□□□□□ -0.92
PNKP-218ENST00000625299 PEX7O00628 323 aa9.32□□□□□ -0.92
PNKP-218ENST00000625299 PHOX2AO14813 284 aa9.32□□□□□ -0.92
PNKP-218ENST00000625299 UBE2G2P60604 165 aa9.32□□□□□ -0.92
PNKP-218ENST00000625299 GAGE6Q13070 117 aa9.32□□□□□ -0.92
PNKP-218ENST00000625299 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
PNKP-218ENST00000625299 DNLZQ5SXM8 178 aa9.32□□□□□ -0.92
PNKP-218ENST00000625299 NEXN-AS1Q8NBZ9 246 aa9.32□□□□□ -0.92
PNKP-218ENST00000625299 CLRN3Q8NCR9 226 aa9.32□□□□□ -0.92
PNKP-218ENST00000625299 IGHV3-64A0A075B6Q5 118 aa9.31□□□□□ -0.92
PNKP-218ENST00000625299 INMT-MINDY4F8WBC2 141 aa9.31□□□□□ -0.92
PNKP-218ENST00000625299 RBX1P62877 108 aa9.31□□□□□ -0.92
PNKP-218ENST00000625299 FAM162BQ5T6X4 162 aa9.31□□□□□ -0.92
PNKP-218ENST00000625299 KRTAP26-1Q6PEX3 210 aa9.31□□□□□ -0.92
PNKP-218ENST00000625299 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
PNKP-218ENST00000625299 RAB4BP61018 213 aa9.3□□□□□ -0.92
PNKP-218ENST00000625299 CNBPP62633 177 aaKnown RBP9.3□□□□□ -0.92
PNKP-218ENST00000625299 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
PNKP-218ENST00000625299 C7orf33Q8WU49 177 aa9.3□□□□□ -0.92
PNKP-218ENST00000625299 ACTR3CQ9C0K3 210 aaPredicted RBP9.3□□□□□ -0.92
PNKP-218ENST00000625299 AP5S1Q9NUS5 200 aa9.3□□□□□ -0.92
PNKP-218ENST00000625299 PRR34Q9NV39 138 aa9.3□□□□□ -0.92
PNKP-218ENST00000625299 KIF25-AS1Q9Y6Z4 181 aa9.3□□□□□ -0.92
PNKP-218ENST00000625299 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.29□□□□□ -0.92
PNKP-218ENST00000625299 MBP02144 154 aa9.29□□□□□ -0.92
PNKP-218ENST00000625299 ATP6V0CP27449 155 aa9.29□□□□□ -0.92
PNKP-218ENST00000625299 RNF185Q96GF1 192 aa9.29□□□□□ -0.92
PNKP-218ENST00000625299 LINC01600Q96MT4 127 aa9.29□□□□□ -0.92
PNKP-218ENST00000625299 PSMG3Q9BT73 122 aaPredicted RBP9.29□□□□□ -0.92
PNKP-218ENST00000625299 F5H697 171 aa9.28□□□□□ -0.92
PNKP-218ENST00000625299 DEFA3P59666 94 aa9.28□□□□□ -0.92
PNKP-218ENST00000625299 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
PNKP-218ENST00000625299 NTM-AS1Q6ZSK4 140 aa9.28□□□□□ -0.92
PNKP-218ENST00000625299 GTSF1Q8WW33 167 aa9.28□□□□□ -0.92
PNKP-218ENST00000625299 DERL1Q9BUN8 251 aa9.28□□□□□ -0.92
PNKP-218ENST00000625299 GAS8-AS1O95177 125 aa9.27□□□□□ -0.93
PNKP-218ENST00000625299 RAB5CP51148 216 aa9.27□□□□□ -0.93
PNKP-218ENST00000625299 UBE2G1P62253 170 aa9.27□□□□□ -0.93
PNKP-218ENST00000625299 REG3AQ06141 175 aa9.27□□□□□ -0.93
PNKP-218ENST00000625299 ZFP30Q9Y2G7 519 aa9.27□□□□□ -0.93
PNKP-218ENST00000625299 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
PNKP-218ENST00000625299 SERF2P84101 59 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms