RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 TRBV7-9A0A0J9YWB2 115 aa11.4□□□□□ -0.58
LINC00552-201ENST00000625151 CRYGDP07320 174 aa11.4□□□□□ -0.58
LINC00552-201ENST00000625151 RRN3P1Q2M238 152 aa11.4□□□□□ -0.58
LINC00552-201ENST00000625151 GTSF1LQ9H1H1 148 aa11.4□□□□□ -0.58
LINC00552-201ENST00000625151 A0A1B0GWB2 263 aa11.39□□□□□ -0.59
LINC00552-201ENST00000625151 KLLNB2CW77 178 aa11.39□□□□□ -0.59
LINC00552-201ENST00000625151 TSHBP01222 138 aa11.39□□□□□ -0.59
LINC00552-201ENST00000625151 PIMREGQ9BSJ6 248 aa11.39□□□□□ -0.59
LINC00552-201ENST00000625151 DAZ1Q9NQZ3 744 aaKnown RBP11.39□□□□□ -0.59
LINC00552-201ENST00000625151 PPP1R17O96001 155 aa11.38□□□□□ -0.59
LINC00552-201ENST00000625151 IGLV1-40P01703 118 aa11.38□□□□□ -0.59
LINC00552-201ENST00000625151 NRGNQ92686 78 aa11.38□□□□□ -0.59
LINC00552-201ENST00000625151 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
LINC00552-201ENST00000625151 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
LINC00552-201ENST00000625151 USP9YO00507 2555 aaPredicted RBP11.38□□□□□ -0.59
LINC00552-201ENST00000625151 ZNF815PA8K554 130 aa11.38□□□□□ -0.59
LINC00552-201ENST00000625151 F8W1H4 67 aa11.38□□□□□ -0.59
LINC00552-201ENST00000625151 COX6B1P14854 86 aa11.38□□□□□ -0.59
LINC00552-201ENST00000625151 TP53TG1Q9Y2A0 90 aa11.38□□□□□ -0.59
LINC00552-201ENST00000625151 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.37□□□□□ -0.59
LINC00552-201ENST00000625151 A0A087WWL8 130 aa11.37□□□□□ -0.59
LINC00552-201ENST00000625151 EMP1P54849 157 aa11.37□□□□□ -0.59
LINC00552-201ENST00000625151 SUMO4Q6EEV6 95 aa11.37□□□□□ -0.59
LINC00552-201ENST00000625151 MORN3Q6PF18 240 aaPredicted RBP11.37□□□□□ -0.59
LINC00552-201ENST00000625151 FAM159AQ6UWV7 190 aa11.37□□□□□ -0.59
LINC00552-201ENST00000625151 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
LINC00552-201ENST00000625151 IGLV4-69A0A075B6H9 119 aa11.37□□□□□ -0.59
LINC00552-201ENST00000625151 IGHV4OR15-8A0A075B7B6 117 aa11.37□□□□□ -0.59
LINC00552-201ENST00000625151 A0A087WW49 117 aa11.37□□□□□ -0.59
LINC00552-201ENST00000625151 CD300EQ496F6 205 aaPredicted RBP11.37□□□□□ -0.59
LINC00552-201ENST00000625151 C10orf105Q8TEF2 133 aa11.37□□□□□ -0.59
LINC00552-201ENST00000625151 C11orf86A6NJI1 115 aa11.36□□□□□ -0.59
LINC00552-201ENST00000625151 TSPAN13O95857 204 aa11.36□□□□□ -0.59
LINC00552-201ENST00000625151 POLR2KP53803 58 aaKnown RBP11.36□□□□□ -0.59
LINC00552-201ENST00000625151 RPL39P62891 51 aaKnown RBP11.36□□□□□ -0.59
LINC00552-201ENST00000625151 ZFP2Q6ZN57 461 aa11.36□□□□□ -0.59
LINC00552-201ENST00000625151 KLHL30-AS1Q8NEE0 82 aa11.36□□□□□ -0.59
LINC00552-201ENST00000625151 DCANP1Q8TF63 244 aa11.36□□□□□ -0.59
LINC00552-201ENST00000625151 POLQO75417 2590 aa11.36□□□□□ -0.59
LINC00552-201ENST00000625151 TRAV12-3A0A0B4J271 114 aa11.36□□□□□ -0.59
LINC00552-201ENST00000625151 IGIPA6NJ69 53 aa11.36□□□□□ -0.59
LINC00552-201ENST00000625151 CD7P09564 240 aa11.35□□□□□ -0.59
LINC00552-201ENST00000625151 CFHR3Q02985 330 aa11.35□□□□□ -0.59
LINC00552-201ENST00000625151 SCGB1D4Q6XE38 83 aa11.35□□□□□ -0.59
LINC00552-201ENST00000625151 SH2D6Q7Z4S9 175 aa11.35□□□□□ -0.59
LINC00552-201ENST00000625151 IGHV4-30-2A0A087WSY4 118 aa11.35□□□□□ -0.59
LINC00552-201ENST00000625151 HOXA3O43365 443 aaPredicted RBP11.35□□□□□ -0.59
LINC00552-201ENST00000625151 RPL32P62910 135 aaKnown RBP11.35□□□□□ -0.59
LINC00552-201ENST00000625151 SPATA25Q9BR10 227 aa11.35□□□□□ -0.59
LINC00552-201ENST00000625151 CSPG4Q6UVK1 2322 aa11.34□□□□□ -0.59
LINC00552-201ENST00000625151 ETDBQ3ZM63 59 aa11.34□□□□□ -0.59
LINC00552-201ENST00000625151 CCL19Q99731 98 aa11.34□□□□□ -0.59
LINC00552-201ENST00000625151 GEMIN7Q9H840 131 aaKnown RBP11.34□□□□□ -0.59
LINC00552-201ENST00000625151 PRO0461Q9UI25 63 aa11.34□□□□□ -0.59
LINC00552-201ENST00000625151 GAGE12HA6NDE8 117 aa11.34□□□□□ -0.59
LINC00552-201ENST00000625151 F5H697 171 aa11.34□□□□□ -0.59
LINC00552-201ENST00000625151 J3QR89 54 aa11.33□□□□□ -0.6
LINC00552-201ENST00000625151 ID1P41134 155 aa11.33□□□□□ -0.6
LINC00552-201ENST00000625151 SDHAF1A6NFY7 115 aa11.33□□□□□ -0.6
LINC00552-201ENST00000625151 AVPP01185 164 aa11.33□□□□□ -0.6
LINC00552-201ENST00000625151 GAGE13Q4V321 117 aa11.33□□□□□ -0.6
LINC00552-201ENST00000625151 K7EMT4 169 aa11.32□□□□□ -0.6
LINC00552-201ENST00000625151 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00552-201ENST00000625151 PMVKQ15126 192 aa11.32□□□□□ -0.6
LINC00552-201ENST00000625151 FAM74A4Q5TZK3 123 aa11.32□□□□□ -0.6
LINC00552-201ENST00000625151 KIR2DL4Q99706 377 aa11.32□□□□□ -0.6
LINC00552-201ENST00000625151 HELZ2Q9BYK8 2649 aaKnown RBP11.32□□□□□ -0.6
LINC00552-201ENST00000625151 VCYO14598 125 aa11.32□□□□□ -0.6
LINC00552-201ENST00000625151 MSMBP08118 114 aa11.32□□□□□ -0.6
LINC00552-201ENST00000625151 SHISA2Q6UWI4 295 aa11.32□□□□□ -0.6
LINC00552-201ENST00000625151 MRPL16Q9NX20 251 aaKnown RBP11.32□□□□□ -0.6
LINC00552-201ENST00000625151 TRAV12-2A0A075B6T6 113 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 LINC01549A6NIU2 74 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 IGKV3-20P01619 116 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 ZNF688P0C7X2 276 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 UBE2D1P51668 147 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 C10orf99Q6UWK7 81 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 ABCA12Q86UK0 2595 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 ATP5J2P56134 94 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 TSPEAR-AS2P59090 65 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 MDFICQ9P1T7 246 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 TSSC4Q9Y5U2 329 aaPredicted RBP11.31□□□□□ -0.6
LINC00552-201ENST00000625151 PTPN13Q12923 2485 aa11.31□□□□□ -0.6
LINC00552-201ENST00000625151 IGHV3-16A0A0C4DH30 117 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 LGALS9O00182 355 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 ZNRF2Q8NHG8 242 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 TIMM17AQ99595 171 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 SPAG8Q99932 426 aaPredicted RBP11.3□□□□□ -0.6
LINC00552-201ENST00000625151 SORL1Q92673 2214 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 A0A0J9YY99 117 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 TRBV27A0A0K0K1C4 114 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 KRTAP10-9P60411 292 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 PAPPA-AS1Q5QFB9 102 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 TMEM141Q96I45 108 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 C9orf85Q96MD7 179 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 FAM110AQ9BQ89 295 aa11.3□□□□□ -0.6
LINC00552-201ENST00000625151 ZNF256Q9Y2P7 627 aaPredicted RBP11.3□□□□□ -0.6
LINC00552-201ENST00000625151 PSMB8P28062 276 aa11.29□□□□□ -0.6
LINC00552-201ENST00000625151 HERVK_113P61574 105 aa11.29□□□□□ -0.6
LINC00552-201ENST00000625151 SFTA2Q6UW10 78 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms