RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 LY6DQ14210 128 aa11.84□□□□□ -0.51
NPHP4-211ENST00000622020 TMEM95Q3KNT9 176 aa11.84□□□□□ -0.51
NPHP4-211ENST00000622020 FAM159AQ6UWV7 190 aa11.84□□□□□ -0.51
NPHP4-211ENST00000622020 OVOL1O14753 267 aa11.84□□□□□ -0.51
NPHP4-211ENST00000622020 IGHV4-38-2P0DP08 117 aa11.84□□□□□ -0.51
NPHP4-211ENST00000622020 HTN1P15515 57 aa11.84□□□□□ -0.51
NPHP4-211ENST00000622020 SUMO4Q6EEV6 95 aa11.84□□□□□ -0.51
NPHP4-211ENST00000622020 RAX2Q96IS3 184 aa11.84□□□□□ -0.51
NPHP4-211ENST00000622020 H3BUX3 64 aa11.83□□□□□ -0.52
NPHP4-211ENST00000622020 SOCS3O14543 225 aa11.83□□□□□ -0.52
NPHP4-211ENST00000622020 UTP20O75691 2785 aaKnown RBP11.83□□□□□ -0.52
NPHP4-211ENST00000622020 IGLV4-69A0A075B6H9 119 aa11.83□□□□□ -0.52
NPHP4-211ENST00000622020 SCGB1C2P0DMR2 95 aa11.83□□□□□ -0.52
NPHP4-211ENST00000622020 KLRB1Q12918 225 aa11.83□□□□□ -0.52
NPHP4-211ENST00000622020 DLX4Q92988 240 aaPredicted RBP11.83□□□□□ -0.52
NPHP4-211ENST00000622020 SDHAF1A6NFY7 115 aa11.82□□□□□ -0.52
NPHP4-211ENST00000622020 MT-ATP8P03928 68 aa11.82□□□□□ -0.52
NPHP4-211ENST00000622020 COX6B1P14854 86 aa11.82□□□□□ -0.52
NPHP4-211ENST00000622020 FOXI1Q12951 378 aa11.82□□□□□ -0.52
NPHP4-211ENST00000622020 ZNRF2Q8NHG8 242 aa11.82□□□□□ -0.52
NPHP4-211ENST00000622020 ZANQ9Y493 2812 aa11.82□□□□□ -0.52
NPHP4-211ENST00000622020 POLQO75417 2590 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 FAM223BA6NKX1 122 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 ZNF688P0C7X2 276 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 FAM223AQ8IWN6 122 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 KLK9Q9UKQ9 250 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 TMEM238LA0A1B0GVL6 79 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 A6NJY4 79 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 C19orf84I3L1E1 186 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 FHL3Q13643 280 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 CFAP126Q5VTH2 177 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 KIR2DL4Q99706 377 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 MDFICQ9P1T7 246 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 LENEPQ9Y5L5 61 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 A0A0J9YY99 117 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 NDUFA4O00483 81 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 SPINK8P0C7L1 97 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 LINC00315P59091 139 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 ZNF56Q15929 161 aa11.81□□□□□ -0.52
NPHP4-211ENST00000622020 GATA3P23771 443 aa11.8□□□□□ -0.52
NPHP4-211ENST00000622020 TCL1BO95988 128 aa11.8□□□□□ -0.52
NPHP4-211ENST00000622020 C10orf99Q6UWK7 81 aa11.8□□□□□ -0.52
NPHP4-211ENST00000622020 NACAE9PAV3 2078 aa11.79□□□□□ -0.52
NPHP4-211ENST00000622020 PMVKQ15126 192 aa11.79□□□□□ -0.52
NPHP4-211ENST00000622020 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
NPHP4-211ENST00000622020 CDIP1Q9H305 208 aa11.79□□□□□ -0.52
NPHP4-211ENST00000622020 ZNF580Q9UK33 172 aa11.79□□□□□ -0.52
NPHP4-211ENST00000622020 IGIPA6NJ69 53 aa11.79□□□□□ -0.52
NPHP4-211ENST00000622020 ADARB2-AS1A8MUL3 147 aa11.79□□□□□ -0.52
NPHP4-211ENST00000622020 TCTEX1D4Q5JR98 221 aa11.79□□□□□ -0.52
NPHP4-211ENST00000622020 IGHV3-73A0A0B4J1V6 119 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 CFC1BP0CG36 223 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 CFC1P0CG37 223 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 UBE2D1P51668 147 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 HERVK_113P61574 105 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 KIF25-AS1Q9Y6Z4 181 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 IGHV1-69DA0A0B4J2H0 117 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 IGHV4-61A0A0C4DH41 118 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 IGHV1-69P01742 117 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 DUX5Q96PT3 197 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 C1QTNF4Q9BXJ3 329 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 IGHV4-39P01824 125 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 ITPR1Q14643 2758 aa11.78□□□□□ -0.52
NPHP4-211ENST00000622020 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.52
NPHP4-211ENST00000622020 XGP55808 180 aa11.77□□□□□ -0.53
NPHP4-211ENST00000622020 BEX4Q9NWD9 120 aaPredicted RBP11.77□□□□□ -0.53
NPHP4-211ENST00000622020 VCYO14598 125 aa11.76□□□□□ -0.53
NPHP4-211ENST00000622020 PRM2P04554 102 aa11.76□□□□□ -0.53
NPHP4-211ENST00000622020 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
NPHP4-211ENST00000622020 C19orf54Q5BKX5 351 aa11.76□□□□□ -0.53
NPHP4-211ENST00000622020 RNASE13Q5GAN3 156 aaKnown RBP11.76□□□□□ -0.53
NPHP4-211ENST00000622020 FLNCQ14315 2725 aa11.76□□□□□ -0.53
NPHP4-211ENST00000622020 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
NPHP4-211ENST00000622020 KLK9Q2XQG4 91 aa11.76□□□□□ -0.53
NPHP4-211ENST00000622020 DAZ1Q9NQZ3 744 aaKnown RBP11.76□□□□□ -0.53
NPHP4-211ENST00000622020 J3QQQ9 107 aa11.76□□□□□ -0.53
NPHP4-211ENST00000622020 LGALS3P17931 250 aaKnown RBP11.76□□□□□ -0.53
NPHP4-211ENST00000622020 TRPT1Q86TN4 253 aaKnown RBP11.76□□□□□ -0.53
NPHP4-211ENST00000622020 FAM19A4Q96LR4 140 aa11.75□□□□□ -0.53
NPHP4-211ENST00000622020 CARD19Q96LW7 228 aa11.75□□□□□ -0.53
NPHP4-211ENST00000622020 C2CD3Q4AC94 2353 aa11.75□□□□□ -0.53
NPHP4-211ENST00000622020 IGHV3-30P01768 117 aa11.75□□□□□ -0.53
NPHP4-211ENST00000622020 IGHV3-30-5P0DP03 117 aa11.75□□□□□ -0.53
NPHP4-211ENST00000622020 CRIP2P52943 208 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-211ENST00000622020 RNF183Q96D59 192 aa11.75□□□□□ -0.53
NPHP4-211ENST00000622020 A4D1N5 150 aa11.74□□□□□ -0.53
NPHP4-211ENST00000622020 LINC01619G3V211 115 aa11.74□□□□□ -0.53
NPHP4-211ENST00000622020 PPP1R17O96001 155 aa11.74□□□□□ -0.53
NPHP4-211ENST00000622020 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-211ENST00000622020 Q8N1Y9 231 aa11.74□□□□□ -0.53
NPHP4-211ENST00000622020 NPC2P61916 151 aa11.73□□□□□ -0.53
NPHP4-211ENST00000622020 Q6ZUT4 128 aa11.73□□□□□ -0.53
NPHP4-211ENST00000622020 USP9XQ93008 2570 aaPredicted RBP11.73□□□□□ -0.53
NPHP4-211ENST00000622020 UBE2D3P61077 147 aa11.73□□□□□ -0.53
NPHP4-211ENST00000622020 UBE2D2P62837 147 aa11.73□□□□□ -0.53
NPHP4-211ENST00000622020 A0A0J9YXV3 536 aa11.73□□□□□ -0.53
NPHP4-211ENST00000622020 P0DMU3 169 aa11.73□□□□□ -0.53
NPHP4-211ENST00000622020 FAM231AP0DMU4 169 aa11.73□□□□□ -0.53
NPHP4-211ENST00000622020 FAM231CP0DMU5 169 aa11.73□□□□□ -0.53
NPHP4-211ENST00000622020 Q1RN00 199 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms