RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 A8MWL6 223 aa12.92□□□□□ -0.34
CIRBP-245ENST00000621399 CACNG7P62955 275 aa12.92□□□□□ -0.34
CIRBP-245ENST00000621399 CT83Q5H943 113 aa12.92□□□□□ -0.34
CIRBP-245ENST00000621399 UFSP1Q6NVU6 142 aa12.92□□□□□ -0.34
CIRBP-245ENST00000621399 UQCC3Q6UW78 93 aa12.92□□□□□ -0.34
CIRBP-245ENST00000621399 SLC25A29Q8N8R3 303 aa12.92□□□□□ -0.34
CIRBP-245ENST00000621399 TRBV6-4A0A1B0GX49 114 aa12.91□□□□□ -0.34
CIRBP-245ENST00000621399 CRYGDP07320 174 aa12.91□□□□□ -0.34
CIRBP-245ENST00000621399 GYPEP15421 78 aa12.91□□□□□ -0.34
CIRBP-245ENST00000621399 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
CIRBP-245ENST00000621399 GTSF1Q8WW33 167 aa12.91□□□□□ -0.34
CIRBP-245ENST00000621399 PRADC1Q9BSG0 188 aa12.91□□□□□ -0.34
CIRBP-245ENST00000621399 HYDINQ4G0P3 5121 aa12.91□□□□□ -0.34
CIRBP-245ENST00000621399 CTRLP40313 264 aa12.9□□□□□ -0.34
CIRBP-245ENST00000621399 CCL18P55774 89 aa12.9□□□□□ -0.34
CIRBP-245ENST00000621399 RHOHQ15669 191 aa12.9□□□□□ -0.34
CIRBP-245ENST00000621399 RNF212Q495C1 297 aa12.9□□□□□ -0.34
CIRBP-245ENST00000621399 Q6ZSN1 163 aa12.9□□□□□ -0.34
CIRBP-245ENST00000621399 OR10G8Q8NGN5 311 aa12.9□□□□□ -0.34
CIRBP-245ENST00000621399 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
CIRBP-245ENST00000621399 K7EQD1 137 aa12.89□□□□□ -0.35
CIRBP-245ENST00000621399 SMIM17P0DL12 118 aa12.89□□□□□ -0.35
CIRBP-245ENST00000621399 SRIP30626 198 aa12.89□□□□□ -0.35
CIRBP-245ENST00000621399 WDR73Q6P4I2 378 aa12.89□□□□□ -0.35
CIRBP-245ENST00000621399 COMMD7Q86VX2 200 aa12.89□□□□□ -0.35
CIRBP-245ENST00000621399 C14orf178Q8N769 122 aaPredicted RBP12.89□□□□□ -0.35
CIRBP-245ENST00000621399 AP1S3Q96PC3 154 aa12.89□□□□□ -0.35
CIRBP-245ENST00000621399 MSRB1Q9NZV6 116 aa12.89□□□□□ -0.35
CIRBP-245ENST00000621399 NTF3P20783 257 aa12.88□□□□□ -0.35
CIRBP-245ENST00000621399 TSKUQ8WUA8 353 aa12.88□□□□□ -0.35
CIRBP-245ENST00000621399 PGLYRP4Q96LB8 373 aa12.88□□□□□ -0.35
CIRBP-245ENST00000621399 V9GYV3 84 aa12.88□□□□□ -0.35
CIRBP-245ENST00000621399 TWIST1Q15672 202 aa12.87□□□□□ -0.35
CIRBP-245ENST00000621399 ESRGQ1W209 222 aa12.87□□□□□ -0.35
CIRBP-245ENST00000621399 NEGR1Q7Z3B1 354 aa12.87□□□□□ -0.35
CIRBP-245ENST00000621399 GFRA4Q9GZZ7 299 aa12.87□□□□□ -0.35
CIRBP-245ENST00000621399 LINC00588Q9Y4M8 146 aa12.87□□□□□ -0.35
CIRBP-245ENST00000621399 LINC00862A6NCI5 91 aa12.86□□□□□ -0.35
CIRBP-245ENST00000621399 FOXA3P55318 350 aaPredicted RBP12.86□□□□□ -0.35
CIRBP-245ENST00000621399 ZNF56Q15929 161 aa12.86□□□□□ -0.35
CIRBP-245ENST00000621399 CNFNQ9BYD5 112 aa12.86□□□□□ -0.35
CIRBP-245ENST00000621399 TMEM218A2RU14 115 aa12.85□□□□□ -0.35
CIRBP-245ENST00000621399 FAM231BA6NCW3 169 aa12.85□□□□□ -0.35
CIRBP-245ENST00000621399 HIGD1CA8MV81 97 aa12.85□□□□□ -0.35
CIRBP-245ENST00000621399 F5H697 171 aa12.85□□□□□ -0.35
CIRBP-245ENST00000621399 TRGC1P0CF51 173 aa12.85□□□□□ -0.35
CIRBP-245ENST00000621399 FAM3BP58499 235 aaPredicted RBP12.85□□□□□ -0.35
CIRBP-245ENST00000621399 RAB4BP61018 213 aa12.85□□□□□ -0.35
CIRBP-245ENST00000621399 PNRC1Q12796 327 aaPredicted RBP12.85□□□□□ -0.35
CIRBP-245ENST00000621399 BORCS7Q96B45 105 aa12.85□□□□□ -0.35
CIRBP-245ENST00000621399 KIF25-AS1Q9Y6Z4 181 aa12.85□□□□□ -0.35
CIRBP-245ENST00000621399 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
CIRBP-245ENST00000621399 LYPD5Q6UWN5 251 aa12.84□□□□□ -0.35
CIRBP-245ENST00000621399 SH2D6Q7Z4S9 175 aa12.84□□□□□ -0.35
CIRBP-245ENST00000621399 GAGE12JA6NER3 117 aa12.83□□□□□ -0.36
CIRBP-245ENST00000621399 F8W036 122 aa12.83□□□□□ -0.36
CIRBP-245ENST00000621399 EVI2AP22794 236 aa12.83□□□□□ -0.36
CIRBP-245ENST00000621399 GAGE1Q13065 139 aa12.83□□□□□ -0.36
CIRBP-245ENST00000621399 GAGE4Q13068 117 aa12.83□□□□□ -0.36
CIRBP-245ENST00000621399 GAGE5Q13069 117 aa12.83□□□□□ -0.36
CIRBP-245ENST00000621399 GAGE13Q4V321 117 aa12.83□□□□□ -0.36
CIRBP-245ENST00000621399 MGPP08493 103 aa12.82□□□□□ -0.36
CIRBP-245ENST00000621399 LINC00315P59091 139 aa12.82□□□□□ -0.36
CIRBP-245ENST00000621399 Q9UF83 564 aa12.82□□□□□ -0.36
CIRBP-245ENST00000621399 NAT8BQ9UHF3 227 aa12.82□□□□□ -0.36
CIRBP-245ENST00000621399 A0A1B0GUT8 65 aa12.81□□□□□ -0.36
CIRBP-245ENST00000621399 PPP1R2P9O14990 202 aa12.81□□□□□ -0.36
CIRBP-245ENST00000621399 ADCYAP1P18509 176 aa12.81□□□□□ -0.36
CIRBP-245ENST00000621399 LCE2DQ5TA82 110 aaPredicted RBP12.81□□□□□ -0.36
CIRBP-245ENST00000621399 SMIM15Q7Z3B0 74 aa12.81□□□□□ -0.36
CIRBP-245ENST00000621399 DPH3P1Q9H4G8 78 aa12.81□□□□□ -0.36
CIRBP-245ENST00000621399 MRPS16Q9Y3D3 137 aaKnown RBP12.81□□□□□ -0.36
CIRBP-245ENST00000621399 TRBV10-1A0A0K0K1A3 114 aa12.8□□□□□ -0.36
CIRBP-245ENST00000621399 SMIM27A0A1W2PRY6 76 aa12.8□□□□□ -0.36
CIRBP-245ENST00000621399 NUP35Q8NFH5 326 aa12.8□□□□□ -0.36
CIRBP-245ENST00000621399 ATP6V0E2Q8NHE4 81 aa12.8□□□□□ -0.36
CIRBP-245ENST00000621399 ZNRF2Q8NHG8 242 aa12.8□□□□□ -0.36
CIRBP-245ENST00000621399 BIRC6Q9NR09 4857 aa12.79□□□□□ -0.36
CIRBP-245ENST00000621399 EPPK1P58107 5090 aaKnown RBP12.79□□□□□ -0.36
CIRBP-245ENST00000621399 IGLV2-18A0A075B6J9 118 aa12.79□□□□□ -0.36
CIRBP-245ENST00000621399 MT-ND4LP03901 98 aa12.79□□□□□ -0.36
CIRBP-245ENST00000621399 UPK3BQ9BT76 320 aa12.79□□□□□ -0.36
CIRBP-245ENST00000621399 SEC11CQ9BY50 192 aa12.79□□□□□ -0.36
CIRBP-245ENST00000621399 RPL36AP83881 106 aaKnown RBP12.78□□□□□ -0.36
CIRBP-245ENST00000621399 RIGQ13278 110 aa12.78□□□□□ -0.36
CIRBP-245ENST00000621399 RPL36ALQ969Q0 106 aaKnown RBP12.78□□□□□ -0.36
CIRBP-245ENST00000621399 Q9H8V8 135 aa12.78□□□□□ -0.36
CIRBP-245ENST00000621399 LINC00694P0DN24 101 aa12.77□□□□□ -0.37
CIRBP-245ENST00000621399 SUMO4Q6EEV6 95 aa12.77□□□□□ -0.37
CIRBP-245ENST00000621399 ANAPC16Q96DE5 110 aa12.77□□□□□ -0.37
CIRBP-245ENST00000621399 TRBV7-3A0A075B6L6 115 aa12.76□□□□□ -0.37
CIRBP-245ENST00000621399 H7C1H1 209 aa12.76□□□□□ -0.37
CIRBP-245ENST00000621399 M0QY20 66 aa12.76□□□□□ -0.37
CIRBP-245ENST00000621399 M0R2N4 97 aa12.76□□□□□ -0.37
CIRBP-245ENST00000621399 TIRAPP58753 221 aa12.76□□□□□ -0.37
CIRBP-245ENST00000621399 GTSF1LQ9H1H1 148 aa12.76□□□□□ -0.37
CIRBP-245ENST00000621399 KMT2AQ03164 3969 aa12.76□□□□□ -0.37
CIRBP-245ENST00000621399 DNAH6Q9C0G6 4158 aa12.76□□□□□ -0.37
CIRBP-245ENST00000621399 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
CIRBP-245ENST00000621399 UBE2D3P61077 147 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms