RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SORL1Q92673 2214 aa12.99□□□□□ -0.33
CNOT3-209ENST00000617930 TRAV12-2A0A075B6T6 113 aa12.98□□□□□ -0.33
CNOT3-209ENST00000617930 TRAV26-2A0A0B4J265 109 aa12.98□□□□□ -0.33
CNOT3-209ENST00000617930 PRSS1P07477 247 aa12.98□□□□□ -0.33
CNOT3-209ENST00000617930 SNRPD3P62318 126 aaKnown RBP12.98□□□□□ -0.33
CNOT3-209ENST00000617930 OR2K2Q8NGT1 345 aa12.98□□□□□ -0.33
CNOT3-209ENST00000617930 TMEM158Q8WZ71 300 aa12.98□□□□□ -0.33
CNOT3-209ENST00000617930 RAX2Q96IS3 184 aa12.98□□□□□ -0.33
CNOT3-209ENST00000617930 AP1S3Q96PC3 154 aa12.98□□□□□ -0.33
CNOT3-209ENST00000617930 CITED2Q99967 270 aaPredicted RBP12.98□□□□□ -0.33
CNOT3-209ENST00000617930 PROK1P58294 105 aa12.98□□□□□ -0.33
CNOT3-209ENST00000617930 SPANXN1Q5VSR9 72 aa12.98□□□□□ -0.33
CNOT3-209ENST00000617930 AGRNO00468 2067 aa12.97□□□□□ -0.33
CNOT3-209ENST00000617930 TRAV8-6A0A0B4J262 113 aa12.97□□□□□ -0.33
CNOT3-209ENST00000617930 TRAV12-3A0A0B4J271 114 aa12.97□□□□□ -0.33
CNOT3-209ENST00000617930 A0A1W2PRX2 142 aa12.97□□□□□ -0.33
CNOT3-209ENST00000617930 NDUFA7O95182 113 aa12.97□□□□□ -0.33
CNOT3-209ENST00000617930 PCP2Q8IVA1 136 aa12.97□□□□□ -0.33
CNOT3-209ENST00000617930 TMEM61Q8N0U2 210 aa12.97□□□□□ -0.33
CNOT3-209ENST00000617930 ODF1Q14990 250 aa12.96□□□□□ -0.33
CNOT3-209ENST00000617930 AMTNQ6UX39 209 aa12.96□□□□□ -0.33
CNOT3-209ENST00000617930 M0R381 172 aa12.96□□□□□ -0.34
CNOT3-209ENST00000617930 ASIPP42127 132 aa12.96□□□□□ -0.34
CNOT3-209ENST00000617930 ADARB2-AS1A8MUL3 147 aa12.95□□□□□ -0.34
CNOT3-209ENST00000617930 ATP5LO75964 103 aa12.95□□□□□ -0.34
CNOT3-209ENST00000617930 IGKCP01834 107 aa12.95□□□□□ -0.34
CNOT3-209ENST00000617930 NRACQ8N912 160 aa12.95□□□□□ -0.34
CNOT3-209ENST00000617930 JMJD1CQ15652 2540 aa12.95□□□□□ -0.34
CNOT3-209ENST00000617930 H3BRM9 83 aa12.95□□□□□ -0.34
CNOT3-209ENST00000617930 RBX1P62877 108 aa12.95□□□□□ -0.34
CNOT3-209ENST00000617930 SPINK13Q1W4C9 94 aa12.95□□□□□ -0.34
CNOT3-209ENST00000617930 JMJD8Q96S16 334 aa12.95□□□□□ -0.34
CNOT3-209ENST00000617930 TENM1Q9UKZ4 2725 aa12.94□□□□□ -0.34
CNOT3-209ENST00000617930 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
CNOT3-209ENST00000617930 IGLV2-18A0A075B6J9 118 aa12.94□□□□□ -0.34
CNOT3-209ENST00000617930 KNCNA6PVL3 124 aa12.94□□□□□ -0.34
CNOT3-209ENST00000617930 FHL3Q13643 280 aa12.94□□□□□ -0.34
CNOT3-209ENST00000617930 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
CNOT3-209ENST00000617930 S100A4P26447 101 aaKnown RBP12.93□□□□□ -0.34
CNOT3-209ENST00000617930 LAGE3Q14657 143 aa12.93□□□□□ -0.34
CNOT3-209ENST00000617930 DEFB114Q30KQ6 69 aa12.93□□□□□ -0.34
CNOT3-209ENST00000617930 ZMAT4Q9H898 229 aa12.93□□□□□ -0.34
CNOT3-209ENST00000617930 C9orf118A6NHY6 69 aa12.93□□□□□ -0.34
CNOT3-209ENST00000617930 DPM2O94777 84 aa12.93□□□□□ -0.34
CNOT3-209ENST00000617930 SMIM17P0DL12 118 aa12.93□□□□□ -0.34
CNOT3-209ENST00000617930 DEFB131AP59861 70 aa12.93□□□□□ -0.34
CNOT3-209ENST00000617930 FOXI2Q6ZQN5 318 aa12.93□□□□□ -0.34
CNOT3-209ENST00000617930 PEMTQ9UBM1 199 aa12.93□□□□□ -0.34
CNOT3-209ENST00000617930 MUC4Q99102 2169 aa12.92□□□□□ -0.34
CNOT3-209ENST00000617930 RBMY1BA6NDE4 496 aaKnown RBP12.92□□□□□ -0.34
CNOT3-209ENST00000617930 RBMY1EA6NEQ0 496 aaKnown RBP12.92□□□□□ -0.34
CNOT3-209ENST00000617930 GAGE10A6NGK3 116 aa12.92□□□□□ -0.34
CNOT3-209ENST00000617930 RBMY1DP0C7P1 496 aaKnown RBP12.92□□□□□ -0.34
CNOT3-209ENST00000617930 RBMY1A1P0DJD3 496 aaKnown RBP12.92□□□□□ -0.34
CNOT3-209ENST00000617930 RBMY1CP0DJD4 496 aa12.92□□□□□ -0.34
CNOT3-209ENST00000617930 RBMY1FQ15415 496 aaKnown RBP12.92□□□□□ -0.34
CNOT3-209ENST00000617930 RNF151Q2KHN1 245 aa12.92□□□□□ -0.34
CNOT3-209ENST00000617930 CD300EQ496F6 205 aaPredicted RBP12.92□□□□□ -0.34
CNOT3-209ENST00000617930 C14orf178Q8N769 122 aaPredicted RBP12.92□□□□□ -0.34
CNOT3-209ENST00000617930 CST9LQ9H4G1 147 aa12.92□□□□□ -0.34
CNOT3-209ENST00000617930 MED14OSP0DP75 135 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 CDKN1BP46527 198 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 GTF2H5Q6ZYL4 71 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 MDFICQ9P1T7 246 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 PHLDA3Q9Y5J5 127 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 PRSS47A8MTI9 375 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 PCP4P48539 62 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 C21orf62-AS1Q17RA5 79 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 FAM159AQ6UWV7 190 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 MRAP2Q96G30 205 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 JPT2Q9H910 190 aa12.91□□□□□ -0.34
CNOT3-209ENST00000617930 IGKV2D-26A0A0A0MRZ7 120 aa12.9□□□□□ -0.34
CNOT3-209ENST00000617930 H3BUT2 72 aa12.9□□□□□ -0.34
CNOT3-209ENST00000617930 NXPH4O95158 308 aa12.9□□□□□ -0.34
CNOT3-209ENST00000617930 LINC00315P59091 139 aa12.9□□□□□ -0.34
CNOT3-209ENST00000617930 GTSCR1Q86UQ5 136 aa12.9□□□□□ -0.34
CNOT3-209ENST00000617930 RAB37Q96AX2 223 aa12.9□□□□□ -0.34
CNOT3-209ENST00000617930 ZNF256Q9Y2P7 627 aaPredicted RBP12.9□□□□□ -0.34
CNOT3-209ENST00000617930 CCL24O00175 119 aa12.89□□□□□ -0.35
CNOT3-209ENST00000617930 CD7P09564 240 aa12.89□□□□□ -0.35
CNOT3-209ENST00000617930 ZC2HC1BQ5TFG8 222 aa12.89□□□□□ -0.35
CNOT3-209ENST00000617930 HHLA3Q9XRX5 114 aa12.89□□□□□ -0.35
CNOT3-209ENST00000617930 KIF25-AS1Q9Y6Z4 181 aa12.89□□□□□ -0.35
CNOT3-209ENST00000617930 GAGE12BA1L429 117 aa12.89□□□□□ -0.35
CNOT3-209ENST00000617930 H3BMM0 161 aa12.89□□□□□ -0.35
CNOT3-209ENST00000617930 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.89□□□□□ -0.35
CNOT3-209ENST00000617930 TSSC4Q9Y5U2 329 aaPredicted RBP12.89□□□□□ -0.35
CNOT3-209ENST00000617930 IGHV3-16A0A0C4DH30 117 aa12.88□□□□□ -0.35
CNOT3-209ENST00000617930 A8MTW9 85 aa12.88□□□□□ -0.35
CNOT3-209ENST00000617930 Q8N1Y9 231 aa12.88□□□□□ -0.35
CNOT3-209ENST00000617930 RASL10AQ92737 203 aa12.88□□□□□ -0.35
CNOT3-209ENST00000617930 NAA38Q9BRA0 125 aaKnown RBP12.88□□□□□ -0.35
CNOT3-209ENST00000617930 HIGD1BQ9P298 99 aa12.88□□□□□ -0.35
CNOT3-209ENST00000617930 DUSP14O95147 198 aaKnown RBP12.88□□□□□ -0.35
CNOT3-209ENST00000617930 PRM2P04554 102 aa12.88□□□□□ -0.35
CNOT3-209ENST00000617930 GCSHP23434 173 aa12.88□□□□□ -0.35
CNOT3-209ENST00000617930 OCIAD2Q56VL3 154 aa12.88□□□□□ -0.35
CNOT3-209ENST00000617930 CHAC1Q9BUX1 264 aa12.88□□□□□ -0.35
CNOT3-209ENST00000617930 SMIM2Q9BVW6 85 aa12.88□□□□□ -0.35
CNOT3-209ENST00000617930 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms