RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 A0A1B0GW15 77 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 NPIPB6E9PJ23 425 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 ATP5LO75964 103 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 FSTL3O95633 263 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 PPBPP02775 128 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 FOSL1P15407 271 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 PEMTQ9UBM1 199 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 MXRA5Q9NR99 2828 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 A6NDX4 124 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 CDKN1BP46527 198 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 VCX2Q9H322 139 aa11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GEMIN7Q9H840 131 aaKnown RBP11.24□□□□□ -0.61
TNFRSF11A-206ENST00000617039 TRAV2A0A0B4J234 112 aa11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 TRAV8-2A0A0B4J237 113 aa11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 A0A1B0GV72 72 aa11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 CLPSL1A2RUU4 121 aa11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 C2orf70A6NJV1 201 aa11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 PROK1P58294 105 aa11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 Q8N6K4 173 aa11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 LGALS3P17931 250 aaKnown RBP11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 CITED2Q99967 270 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 C20orf144Q9BQM9 153 aa11.23□□□□□ -0.61
TNFRSF11A-206ENST00000617039 A0A1B0GXF2 115 aa11.22□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GAGE7O76087 117 aa11.22□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
TNFRSF11A-206ENST00000617039 CD28P10747 220 aa11.22□□□□□ -0.61
TNFRSF11A-206ENST00000617039 PRSS29PA6NIE9 313 aa11.22□□□□□ -0.61
TNFRSF11A-206ENST00000617039 HERVK_113P61574 105 aa11.22□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GAGE12JA6NER3 117 aa11.21□□□□□ -0.61
TNFRSF11A-206ENST00000617039 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GAGE1Q13065 139 aa11.21□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GAGE4Q13068 117 aa11.21□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GAGE5Q13069 117 aa11.21□□□□□ -0.61
TNFRSF11A-206ENST00000617039 GAGE13Q4V321 117 aa11.21□□□□□ -0.61
TNFRSF11A-206ENST00000617039 LINC01619G3V211 115 aa11.21□□□□□ -0.61
TNFRSF11A-206ENST00000617039 AMTNQ6UX39 209 aa11.21□□□□□ -0.62
TNFRSF11A-206ENST00000617039 FAM231BA6NCW3 169 aa11.2□□□□□ -0.62
TNFRSF11A-206ENST00000617039 DLEU1O43261 78 aa11.2□□□□□ -0.62
TNFRSF11A-206ENST00000617039 C2orf88Q9BSF0 95 aa11.2□□□□□ -0.62
TNFRSF11A-206ENST00000617039 IGHV1OR15-1A0A075B7D0 117 aa11.2□□□□□ -0.62
TNFRSF11A-206ENST00000617039 IGHV4-31P0DP07 118 aa11.2□□□□□ -0.62
TNFRSF11A-206ENST00000617039 CLPSL2Q6UWE3 100 aa11.2□□□□□ -0.62
TNFRSF11A-206ENST00000617039 URB1-AS1Q96HZ7 61 aa11.2□□□□□ -0.62
TNFRSF11A-206ENST00000617039 SPCS1Q9Y6A9 102 aa11.2□□□□□ -0.62
TNFRSF11A-206ENST00000617039 COL27A1Q8IZC6 1860 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 TRGV4A0A0C4DH28 118 aa11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 FABP2P12104 132 aa11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 APCP25054 2843 aa11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 IGKV2-29A2NJV5 120 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 UBE2L6O14933 153 aa11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 SMIM12Q96EX1 92 aa11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 MEGF9Q9H1U4 602 aa11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 EBI3Q14213 229 aa11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 SMIM2Q9BVW6 85 aa11.19□□□□□ -0.62
TNFRSF11A-206ENST00000617039 ZNRF2Q8NHG8 242 aa11.18□□□□□ -0.62
TNFRSF11A-206ENST00000617039 KIR2DL5BA0A0G2JN68 375 aa11.18□□□□□ -0.62
TNFRSF11A-206ENST00000617039 KIR2DL5BA0A0G2JPC4 375 aa11.18□□□□□ -0.62
TNFRSF11A-206ENST00000617039 CCL24O00175 119 aa11.18□□□□□ -0.62
TNFRSF11A-206ENST00000617039 SMIM13P0DJ93 91 aa11.18□□□□□ -0.62
TNFRSF11A-206ENST00000617039 MEIG1Q5JSS6 88 aa11.18□□□□□ -0.62
TNFRSF11A-206ENST00000617039 KIR2DL5AQ8N109 375 aa11.18□□□□□ -0.62
TNFRSF11A-206ENST00000617039 GATA3P23771 443 aa11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 ADAMTSL5Q6ZMM2 481 aa11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 ORAOV1Q8WV07 137 aa11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 GTF2H5Q6ZYL4 71 aa11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 CD5LO43866 347 aa11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 PAX2Q02962 417 aa11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 ORMDL2Q53FV1 153 aa11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 LBHQ53QV2 105 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 ZNF48Q96MX3 618 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 NOP10Q9NPE3 64 aaKnown RBP11.17□□□□□ -0.62
TNFRSF11A-206ENST00000617039 LGALS1P09382 135 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11A-206ENST00000617039 CHCHD5Q9BSY4 110 aa11.16□□□□□ -0.62
TNFRSF11A-206ENST00000617039 MRPS12O15235 138 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11A-206ENST00000617039 RNASE1P07998 156 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11A-206ENST00000617039 BAHCC1Q9P281 2608 aa11.16□□□□□ -0.62
TNFRSF11A-206ENST00000617039 KLF5Q13887 457 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF11A-206ENST00000617039 GATD1Q8NB37 220 aa11.15□□□□□ -0.62
TNFRSF11A-206ENST00000617039 Q8N8P6 123 aa11.15□□□□□ -0.62
TNFRSF11A-206ENST00000617039 IGHG4P01861 327 aa11.15□□□□□ -0.63
TNFRSF11A-206ENST00000617039 SUMO4Q6EEV6 95 aa11.15□□□□□ -0.63
TNFRSF11A-206ENST00000617039 OR9G4Q8NGQ1 327 aa11.14□□□□□ -0.63
TNFRSF11A-206ENST00000617039 CHAC1Q9BUX1 264 aa11.14□□□□□ -0.63
TNFRSF11A-206ENST00000617039 DNAJC9-AS1A6NH13 148 aa11.14□□□□□ -0.63
TNFRSF11A-206ENST00000617039 ZFAND2AQ8N6M9 145 aa11.14□□□□□ -0.63
TNFRSF11A-206ENST00000617039 VCYO14598 125 aa11.14□□□□□ -0.63
TNFRSF11A-206ENST00000617039 U3KQE9 123 aa11.14□□□□□ -0.63
TNFRSF11A-206ENST00000617039 NSD1Q96L73 2696 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF11A-206ENST00000617039 IGKV2D-26A0A0A0MRZ7 120 aa11.13□□□□□ -0.63
TNFRSF11A-206ENST00000617039 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
TNFRSF11A-206ENST00000617039 HIVEP1P15822 2718 aa11.13□□□□□ -0.63
TNFRSF11A-206ENST00000617039 COTL1Q14019 142 aa11.13□□□□□ -0.63
TNFRSF11A-206ENST00000617039 PRADC1Q9BSG0 188 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms