RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 FAM74A4Q5TZK3 123 aa4.08□□□□□ -1.76
MUC1-227ENST00000615517 GOLT1AQ6ZVE7 132 aa4.08□□□□□ -1.76
MUC1-227ENST00000615517 RPL36ALQ969Q0 106 aaKnown RBP4.08□□□□□ -1.76
MUC1-227ENST00000615517 SGK494Q96LW2 274 aa4.08□□□□□ -1.76
MUC1-227ENST00000615517 HYLS1Q96M11 299 aa4.08□□□□□ -1.76
MUC1-227ENST00000615517 KRTAP4-1Q9BYQ7 146 aa4.08□□□□□ -1.76
MUC1-227ENST00000615517 SLIRPQ9GZT3 109 aaKnown RBP4.08□□□□□ -1.76
MUC1-227ENST00000615517 UQCC1Q9NVA1 299 aa4.08□□□□□ -1.76
MUC1-227ENST00000615517 IGKV3D-20A0A0C4DH25 116 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 TRBV10-1A0A0K0K1A3 114 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 H0Y9J4 135 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 RHODO00212 210 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 CTDSP2O14595 271 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 S100A10P60903 97 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 C1orf137Q5JT78 98 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 FER1L6-AS1Q8NA97 138 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 C20orf203Q8NBC4 194 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 OR10G8Q8NGN5 311 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 DIRC1Q969H9 104 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 FUNDC2Q9BWH2 189 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 NMES1Q9C002 83 aa4.07□□□□□ -1.76
MUC1-227ENST00000615517 RABL2AQ9UBK7 228 aaPredicted RBP4.07□□□□□ -1.76
MUC1-227ENST00000615517 SSPOA2VEC9 5147 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 TRAV8-4A0A0B4J246 113 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 A0A1W2PNN7 141 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 C9orf170A2RU37 121 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 GCGP01275 180 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 P01737 135 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 MT-ND6P03923 174 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 IGLV7-43P04211 117 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 FGF7P21781 194 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 PKIAP61925 76 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 GNG5P63218 68 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 IL18Q14116 193 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 NEXN-AS1Q8NBZ9 246 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 AP3S1Q92572 193 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 SFRP2Q96HF1 295 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 NPCDR1Q9BY65 106 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 C11orf1Q9H5F2 150 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 LINC00474Q9P2X8 69 aa4.06□□□□□ -1.76
MUC1-227ENST00000615517 IGLV4-60A0A075B6I1 120 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 OR7C2O60412 319 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 GZMBP10144 247 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 UBE2L3P68036 154 aaKnown RBP4.05□□□□□ -1.76
MUC1-227ENST00000615517 CTF1Q16619 201 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 IAH1Q2TAA2 248 aaPredicted RBP4.05□□□□□ -1.76
MUC1-227ENST00000615517 SPANXN2Q5MJ10 180 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 MCFD2Q8NI22 146 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 MITD1Q8WV92 249 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 VCX3BQ9H321 246 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 OTORQ9NRC9 128 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 OR5AC2Q9NZP5 309 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 GSKIPQ9P0R6 139 aa4.05□□□□□ -1.76
MUC1-227ENST00000615517 GVQW2A0A096LPI5 108 aaPredicted RBP4.04□□□□□ -1.76
MUC1-227ENST00000615517 TRAV1-1A0A0B4J248 108 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 IGSF23A1L1A6 192 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 GAGE12HA6NDE8 117 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 H3BVH4 76 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 RGS5O15539 181 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 EIF3GO75821 320 aaKnown RBP eCLIP4.04□□□□□ -1.76
MUC1-227ENST00000615517 S100A4P26447 101 aaKnown RBP4.04□□□□□ -1.76
MUC1-227ENST00000615517 AMTP48728 403 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 BCAP31P51572 246 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 UBE2D1P51668 147 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 PRR27Q6MZM9 219 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 PHF5AQ7RTV0 110 aaKnown RBP4.04□□□□□ -1.76
MUC1-227ENST00000615517 KRTAP11-1Q8IUC1 163 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 CMTM2Q8TAZ6 248 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 NAA50Q9GZZ1 169 aaKnown RBP4.04□□□□□ -1.76
MUC1-227ENST00000615517 IL36BQ9NZH7 164 aa4.04□□□□□ -1.76
MUC1-227ENST00000615517 L7N2F9 121 aa4.03□□□□□ -1.76
MUC1-227ENST00000615517 S100A11P31949 105 aa4.03□□□□□ -1.76
MUC1-227ENST00000615517 RPL13AP40429 203 aaKnown RBP4.03□□□□□ -1.76
MUC1-227ENST00000615517 PTTG1IPP53801 180 aa4.03□□□□□ -1.76
MUC1-227ENST00000615517 VAMP2P63027 116 aa4.03□□□□□ -1.76
MUC1-227ENST00000615517 CYCSP99999 105 aaKnown RBP4.03□□□□□ -1.76
MUC1-227ENST00000615517 TPRXLQ17RH7 258 aa4.03□□□□□ -1.76
MUC1-227ENST00000615517 ARL6IP6Q8N6S5 226 aa4.03□□□□□ -1.76
MUC1-227ENST00000615517 LINC00526Q96FQ7 95 aa4.03□□□□□ -1.76
MUC1-227ENST00000615517 RETNLBQ9BQ08 111 aa4.03□□□□□ -1.76
MUC1-227ENST00000615517 SLC25A21Q9BQT8 299 aaPredicted RBP4.03□□□□□ -1.76
MUC1-227ENST00000615517 LYRM2Q9NU23 88 aaPredicted RBP4.03□□□□□ -1.76
MUC1-227ENST00000615517 LSM5Q9Y4Y9 91 aaKnown RBP4.03□□□□□ -1.76
MUC1-227ENST00000615517 TRBV25-1A0A075B6N4 114 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 TRBV6-1A0A0K0K1D8 114 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 ARMS2P0C7Q2 107 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 SULT1A1P50225 295 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 RAB2AP61019 212 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 IQCJQ1A5X6 159 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 SMUG1Q53HV7 270 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 TMEM252Q8N6L7 170 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 OR11H4Q8NGC9 324 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 THAP6Q8TBB0 222 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 NDFIP1Q9BT67 221 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 DERL1Q9BUN8 251 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 MBD2Q9UBB5 411 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 PSG8Q9UQ74 426 aa4.02□□□□□ -1.77
MUC1-227ENST00000615517 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms