RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SRIP30626 198 aa9.25□□□□□ -0.93
MDC1-209ENST00000613547 CCL18P55774 89 aa9.25□□□□□ -0.93
MDC1-209ENST00000613547 RNF212Q495C1 297 aa9.25□□□□□ -0.93
MDC1-209ENST00000613547 WDR73Q6P4I2 378 aa9.25□□□□□ -0.93
MDC1-209ENST00000613547 OR10G8Q8NGN5 311 aa9.25□□□□□ -0.93
MDC1-209ENST00000613547 BORCS7Q96B45 105 aa9.25□□□□□ -0.93
MDC1-209ENST00000613547 GFRA4Q9GZZ7 299 aa9.25□□□□□ -0.93
MDC1-209ENST00000613547 FAM231BA6NCW3 169 aa9.24□□□□□ -0.93
MDC1-209ENST00000613547 TRGC1P0CF51 173 aa9.24□□□□□ -0.93
MDC1-209ENST00000613547 GYPEP15421 78 aa9.24□□□□□ -0.93
MDC1-209ENST00000613547 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
MDC1-209ENST00000613547 SLC25A29Q8N8R3 303 aa9.24□□□□□ -0.93
MDC1-209ENST00000613547 TSKUQ8WUA8 353 aa9.24□□□□□ -0.93
MDC1-209ENST00000613547 SAMD10Q9BYL1 202 aa9.24□□□□□ -0.93
MDC1-209ENST00000613547 MUC4Q99102 2169 aa9.24□□□□□ -0.93
MDC1-209ENST00000613547 A0A096LPF7 62 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 LINC00862A6NCI5 91 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 K7EQD1 137 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 CRYGDP07320 174 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 FAM3BP58499 235 aaPredicted RBP9.23□□□□□ -0.93
MDC1-209ENST00000613547 TWIST1Q15672 202 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 ZNF56Q15929 161 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 UFSP1Q6NVU6 142 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 SMIM15Q7Z3B0 74 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 NEGR1Q7Z3B1 354 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 GTSF1Q8WW33 167 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 CNFNQ9BYD5 112 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 V9GYV3 84 aa9.23□□□□□ -0.93
MDC1-209ENST00000613547 TMEM218A2RU14 115 aa9.22□□□□□ -0.93
MDC1-209ENST00000613547 HIGD1CA8MV81 97 aa9.22□□□□□ -0.93
MDC1-209ENST00000613547 F5H697 171 aa9.22□□□□□ -0.93
MDC1-209ENST00000613547 F8W036 122 aa9.22□□□□□ -0.93
MDC1-209ENST00000613547 PPP1R2P9O14990 202 aa9.22□□□□□ -0.93
MDC1-209ENST00000613547 NTF3P20783 257 aa9.22□□□□□ -0.93
MDC1-209ENST00000613547 FOXA3P55318 350 aaPredicted RBP9.22□□□□□ -0.93
MDC1-209ENST00000613547 C14orf178Q8N769 122 aaPredicted RBP9.22□□□□□ -0.93
MDC1-209ENST00000613547 PGLYRP4Q96LB8 373 aa9.22□□□□□ -0.93
MDC1-209ENST00000613547 RAB4BP61018 213 aa9.21□□□□□ -0.94
MDC1-209ENST00000613547 NAT8BQ9UHF3 227 aa9.21□□□□□ -0.94
MDC1-209ENST00000613547 DYNC2H1Q8NCM8 4307 aaKnown RBP9.21□□□□□ -0.94
MDC1-209ENST00000613547 A0A1B0GUT8 65 aa9.2□□□□□ -0.94
MDC1-209ENST00000613547 MT-ND4LP03901 98 aa9.2□□□□□ -0.94
MDC1-209ENST00000613547 MGPP08493 103 aa9.2□□□□□ -0.94
MDC1-209ENST00000613547 Q6ZSN1 163 aa9.2□□□□□ -0.94
MDC1-209ENST00000613547 DPH3P1Q9H4G8 78 aa9.2□□□□□ -0.94
MDC1-209ENST00000613547 MSRB1Q9NZV6 116 aa9.2□□□□□ -0.94
MDC1-209ENST00000613547 TRBV10-1A0A0K0K1A3 114 aa9.19□□□□□ -0.94
MDC1-209ENST00000613547 LOC100131303A0A0U1RQF7 123 aa9.19□□□□□ -0.94
MDC1-209ENST00000613547 EVI2AP22794 236 aa9.19□□□□□ -0.94
MDC1-209ENST00000613547 SEC11CQ9BY50 192 aa9.19□□□□□ -0.94
MDC1-209ENST00000613547 SMIM27A0A1W2PRY6 76 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 GAGE12JA6NER3 117 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 H7C1H1 209 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 RPL36AP83881 106 aaKnown RBP9.18□□□□□ -0.94
MDC1-209ENST00000613547 GAGE1Q13065 139 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 GAGE4Q13068 117 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 GAGE5Q13069 117 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 RIGQ13278 110 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 ESRGQ1W209 222 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 GAGE13Q4V321 117 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.18□□□□□ -0.94
MDC1-209ENST00000613547 RPL36ALQ969Q0 106 aaKnown RBP9.18□□□□□ -0.94
MDC1-209ENST00000613547 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
MDC1-209ENST00000613547 LINC00588Q9Y4M8 146 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 KIF25-AS1Q9Y6Z4 181 aa9.18□□□□□ -0.94
MDC1-209ENST00000613547 ADCYAP1P18509 176 aa9.17□□□□□ -0.94
MDC1-209ENST00000613547 LYPD5Q6UWN5 251 aa9.17□□□□□ -0.94
MDC1-209ENST00000613547 NUP35Q8NFH5 326 aa9.17□□□□□ -0.94
MDC1-209ENST00000613547 ATP6V0E2Q8NHE4 81 aa9.17□□□□□ -0.94
MDC1-209ENST00000613547 ALMS1Q8TCU4 4167 aa9.16□□□□□ -0.94
MDC1-209ENST00000613547 TIRAPP58753 221 aa9.16□□□□□ -0.94
MDC1-209ENST00000613547 LINC00315P59091 139 aa9.16□□□□□ -0.94
MDC1-209ENST00000613547 UPK3BQ9BT76 320 aa9.16□□□□□ -0.94
MDC1-209ENST00000613547 TRBV7-3A0A075B6L6 115 aa9.15□□□□□ -0.94
MDC1-209ENST00000613547 A0A1B0GW15 77 aa9.15□□□□□ -0.94
MDC1-209ENST00000613547 S100A8P05109 93 aa9.15□□□□□ -0.94
MDC1-209ENST00000613547 ZNRF2Q8NHG8 242 aa9.15□□□□□ -0.94
MDC1-209ENST00000613547 GTSF1LQ9H1H1 148 aa9.15□□□□□ -0.94
MDC1-209ENST00000613547 PLECQ15149 4684 aaKnown RBP9.14□□□□□ -0.95
MDC1-209ENST00000613547 NDUFA5Q16718 116 aa9.14□□□□□ -0.95
MDC1-209ENST00000613547 SUMO4Q6EEV6 95 aa9.14□□□□□ -0.95
MDC1-209ENST00000613547 RASL11AQ6T310 242 aa9.14□□□□□ -0.95
MDC1-209ENST00000613547 TMEM191AQ9H0A3 160 aa9.14□□□□□ -0.95
MDC1-209ENST00000613547 CARHSP1Q9Y2V2 147 aaKnown RBP9.14□□□□□ -0.95
MDC1-209ENST00000613547 KMT2CQ8NEZ4 4911 aaKnown RBP9.14□□□□□ -0.95
MDC1-209ENST00000613547 A0A087WWC5 75 aa9.13□□□□□ -0.95
MDC1-209ENST00000613547 TRAV8-6A0A0B4J262 113 aa9.13□□□□□ -0.95
MDC1-209ENST00000613547 M0QY20 66 aa9.13□□□□□ -0.95
MDC1-209ENST00000613547 LINC00694P0DN24 101 aa9.13□□□□□ -0.95
MDC1-209ENST00000613547 TTC32Q5I0X7 151 aa9.13□□□□□ -0.95
MDC1-209ENST00000613547 NEXN-AS1Q8NBZ9 246 aa9.13□□□□□ -0.95
MDC1-209ENST00000613547 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
MDC1-209ENST00000613547 CTDSP1Q9GZU7 261 aa9.13□□□□□ -0.95
MDC1-209ENST00000613547 Q9H8V8 135 aa9.13□□□□□ -0.95
MDC1-209ENST00000613547 TNFRSF18Q9Y5U5 241 aa9.13□□□□□ -0.95
MDC1-209ENST00000613547 NACAE9PAV3 2078 aa9.12□□□□□ -0.95
MDC1-209ENST00000613547 IGLV2-18A0A075B6J9 118 aa9.12□□□□□ -0.95
MDC1-209ENST00000613547 SIVA1O15304 175 aa9.12□□□□□ -0.95
MDC1-209ENST00000613547 CAMPP49913 170 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms