RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 SHANK1Q9Y566 2161 aa12.07□□□□□ -0.48
TNXB-208ENST00000611016 C19orf84I3L1E1 186 aa12.07□□□□□ -0.48
TNXB-208ENST00000611016 PATE2Q6UY27 113 aa12.07□□□□□ -0.48
TNXB-208ENST00000611016 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
TNXB-208ENST00000611016 DEFB4AO15263 64 aa12.07□□□□□ -0.48
TNXB-208ENST00000611016 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.48
TNXB-208ENST00000611016 DEFB135Q30KP9 77 aa12.07□□□□□ -0.48
TNXB-208ENST00000611016 TEX22C9J3V5 150 aa12.07□□□□□ -0.48
TNXB-208ENST00000611016 IGHG2P01859 326 aa12.06□□□□□ -0.48
TNXB-208ENST00000611016 GPHB5Q86YW7 130 aa12.06□□□□□ -0.48
TNXB-208ENST00000611016 MRPL36Q9P0J6 103 aaKnown RBP12.06□□□□□ -0.48
TNXB-208ENST00000611016 DNAJC9-AS1A6NH13 148 aa12.06□□□□□ -0.48
TNXB-208ENST00000611016 GAGE12HA6NDE8 117 aa12.06□□□□□ -0.48
TNXB-208ENST00000611016 COX7A2LO14548 114 aa12.05□□□□□ -0.48
TNXB-208ENST00000611016 ZFP2Q6ZN57 461 aa12.05□□□□□ -0.48
TNXB-208ENST00000611016 ETDCA0A1B0GVM5 59 aa12.05□□□□□ -0.48
TNXB-208ENST00000611016 CDPF1Q6NVV7 123 aa12.05□□□□□ -0.48
TNXB-208ENST00000611016 SMAD5-AS1Q9Y6J3 95 aa12.05□□□□□ -0.48
TNXB-208ENST00000611016 DYSFO75923 2080 aa12.05□□□□□ -0.48
TNXB-208ENST00000611016 BAALC-AS2P0C853 105 aa12.05□□□□□ -0.48
TNXB-208ENST00000611016 CAMK2N2Q96S95 79 aa12.05□□□□□ -0.48
TNXB-208ENST00000611016 ODF3L1Q8IXM7 274 aa12.04□□□□□ -0.48
TNXB-208ENST00000611016 DEFB105AQ8NG35 78 aa12.04□□□□□ -0.48
TNXB-208ENST00000611016 HIGD1BQ9P298 99 aa12.04□□□□□ -0.48
TNXB-208ENST00000611016 PRAC2D3DTV9 90 aa12.04□□□□□ -0.48
TNXB-208ENST00000611016 Q8N1Y9 231 aa12.04□□□□□ -0.48
TNXB-208ENST00000611016 TIMM17AQ99595 171 aa12.04□□□□□ -0.48
TNXB-208ENST00000611016 LOXL1Q08397 574 aaPredicted RBP12.04□□□□□ -0.48
TNXB-208ENST00000611016 AMTNQ6UX39 209 aa12.04□□□□□ -0.48
TNXB-208ENST00000611016 TMEM258P61165 79 aa12.03□□□□□ -0.48
TNXB-208ENST00000611016 A6NDX4 124 aa12.03□□□□□ -0.48
TNXB-208ENST00000611016 DEFB125Q8N687 156 aa12.03□□□□□ -0.48
TNXB-208ENST00000611016 LYPD6Q86Y78 171 aa12.03□□□□□ -0.48
TNXB-208ENST00000611016 HHLA3Q9XRX5 114 aa12.03□□□□□ -0.48
TNXB-208ENST00000611016 TTC28Q96AY4 2481 aa12.03□□□□□ -0.48
TNXB-208ENST00000611016 COX7B2Q8TF08 81 aa12.03□□□□□ -0.48
TNXB-208ENST00000611016 H3BMG7 143 aa12.02□□□□□ -0.48
TNXB-208ENST00000611016 NTN5Q8WTR8 489 aaPredicted RBP12.02□□□□□ -0.48
TNXB-208ENST00000611016 MSRB1Q9NZV6 116 aa12.02□□□□□ -0.48
TNXB-208ENST00000611016 TRAV4A0A0B4J268 109 aa12.02□□□□□ -0.49
TNXB-208ENST00000611016 E7EUB6 86 aa12.02□□□□□ -0.49
TNXB-208ENST00000611016 INSL3P51460 131 aa12.02□□□□□ -0.49
TNXB-208ENST00000611016 TRBV12-3P01733 135 aa12.02□□□□□ -0.49
TNXB-208ENST00000611016 DEFB1P60022 68 aa12.02□□□□□ -0.49
TNXB-208ENST00000611016 TM2D2Q9BX73 214 aa12.02□□□□□ -0.49
TNXB-208ENST00000611016 CTRLP40313 264 aa12.02□□□□□ -0.49
TNXB-208ENST00000611016 K7ERJ3 54 aa12.01□□□□□ -0.49
TNXB-208ENST00000611016 hADV29S1A0JD25 119 aa12.01□□□□□ -0.49
TNXB-208ENST00000611016 IGHV4-4A0A075B6R2 117 aa12□□□□□ -0.49
TNXB-208ENST00000611016 TOMM6Q96B49 74 aa12□□□□□ -0.49
TNXB-208ENST00000611016 ZNF503Q96F45 646 aa12□□□□□ -0.49
TNXB-208ENST00000611016 PRO3102Q9H379 93 aa12□□□□□ -0.49
TNXB-208ENST00000611016 TIRAPP58753 221 aa12□□□□□ -0.49
TNXB-208ENST00000611016 LRRC75A-AS1Q8N1F1 130 aa12□□□□□ -0.49
TNXB-208ENST00000611016 C15orf53Q8NAA6 179 aa12□□□□□ -0.49
TNXB-208ENST00000611016 OPRPNQ99935 248 aaPredicted RBP12□□□□□ -0.49
TNXB-208ENST00000611016 UNQ9165/PRO28630Q6UXU0 137 aa12□□□□□ -0.49
TNXB-208ENST00000611016 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
TNXB-208ENST00000611016 NDUFA1O15239 70 aa11.99□□□□□ -0.49
TNXB-208ENST00000611016 LMO4P61968 165 aa11.99□□□□□ -0.49
TNXB-208ENST00000611016 FAM167A-AS1Q96KT0 104 aa11.99□□□□□ -0.49
TNXB-208ENST00000611016 TRBV7-3A0A075B6L6 115 aa11.99□□□□□ -0.49
TNXB-208ENST00000611016 LTBP2Q14767 1821 aa11.99□□□□□ -0.49
TNXB-208ENST00000611016 TINCRA0A1B0GVN0 87 aa11.99□□□□□ -0.49
TNXB-208ENST00000611016 TNFRSF13BO14836 293 aaPredicted RBP11.99□□□□□ -0.49
TNXB-208ENST00000611016 KLK5Q9Y337 293 aaPredicted RBP11.99□□□□□ -0.49
TNXB-208ENST00000611016 WFDC11Q8NEX6 87 aa11.99□□□□□ -0.49
TNXB-208ENST00000611016 TMEM61Q8N0U2 210 aa11.98□□□□□ -0.49
TNXB-208ENST00000611016 C11orf86A6NJI1 115 aa11.98□□□□□ -0.49
TNXB-208ENST00000611016 IGLL5B9A064 214 aa11.98□□□□□ -0.49
TNXB-208ENST00000611016 COL4A3Q01955 1670 aa11.98□□□□□ -0.49
TNXB-208ENST00000611016 IGLV2-14P01704 120 aa11.98□□□□□ -0.49
TNXB-208ENST00000611016 NDUFB1O75438 58 aa11.98□□□□□ -0.49
TNXB-208ENST00000611016 IGHV4-31P0DP07 118 aa11.98□□□□□ -0.49
TNXB-208ENST00000611016 CRYBA4P53673 196 aa11.98□□□□□ -0.49
TNXB-208ENST00000611016 JMJD7-PLA2G4BH0Y9G9 81 aa11.97□□□□□ -0.49
TNXB-208ENST00000611016 PCP2Q8IVA1 136 aa11.96□□□□□ -0.49
TNXB-208ENST00000611016 ODF3Q96PU9 254 aa11.96□□□□□ -0.49
TNXB-208ENST00000611016 A0A0B4J2C4 111 aa11.96□□□□□ -0.49
TNXB-208ENST00000611016 TRBV10-1A0A0K0K1A3 114 aa11.96□□□□□ -0.49
TNXB-208ENST00000611016 INAFM1C9JVW0 142 aa11.96□□□□□ -0.5
TNXB-208ENST00000611016 FSTL3O95633 263 aa11.96□□□□□ -0.5
TNXB-208ENST00000611016 HIST2H2BCQ6DN03 193 aa11.95□□□□□ -0.5
TNXB-208ENST00000611016 SMIM20Q8N5G0 67 aa11.95□□□□□ -0.5
TNXB-208ENST00000611016 A0A0J9YXV3 536 aa11.95□□□□□ -0.5
TNXB-208ENST00000611016 E9PLD3 99 aa11.95□□□□□ -0.5
TNXB-208ENST00000611016 ZNF843Q8N446 348 aa11.95□□□□□ -0.5
TNXB-208ENST00000611016 IL17DQ8TAD2 202 aa11.95□□□□□ -0.5
TNXB-208ENST00000611016 FANCD2OSQ96PS1 177 aa11.95□□□□□ -0.5
TNXB-208ENST00000611016 PLA2G2EQ9NZK7 142 aa11.95□□□□□ -0.5
TNXB-208ENST00000611016 CCL25O15444 150 aa11.95□□□□□ -0.5
TNXB-208ENST00000611016 PROP1O75360 226 aa11.94□□□□□ -0.5
TNXB-208ENST00000611016 MUSTN1Q8IVN3 82 aa11.94□□□□□ -0.5
TNXB-208ENST00000611016 LINC01548A6NM66 108 aa11.94□□□□□ -0.5
TNXB-208ENST00000611016 PDE6GP18545 87 aa11.94□□□□□ -0.5
TNXB-208ENST00000611016 NDUFA11Q86Y39 141 aa11.94□□□□□ -0.5
TNXB-208ENST00000611016 DENND4AQ7Z401 1863 aa11.94□□□□□ -0.5
TNXB-208ENST00000611016 NDUFS5O43920 106 aa11.94□□□□□ -0.5
TNXB-208ENST00000611016 MAP6D1Q9H9H5 199 aa11.94□□□□□ -0.5
TNXB-208ENST00000611016 LINC00574Q9H8X3 128 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms