RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 SPAG8Q99932 426 aaPredicted RBP13.39□□□□□ -0.27
TNIP1-221ENST00000610874 TRAV21A0A0B4J279 112 aa13.38□□□□□ -0.27
TNIP1-221ENST00000610874 CD300EQ496F6 205 aaPredicted RBP13.38□□□□□ -0.27
TNIP1-221ENST00000610874 PRSS29PA6NIE9 313 aa13.38□□□□□ -0.27
TNIP1-221ENST00000610874 F6UB75 175 aa13.38□□□□□ -0.27
TNIP1-221ENST00000610874 RNASE4P34096 147 aaKnown RBP13.38□□□□□ -0.27
TNIP1-221ENST00000610874 ARL3P36405 182 aa13.38□□□□□ -0.27
TNIP1-221ENST00000610874 SFTA2Q6UW10 78 aa13.38□□□□□ -0.27
TNIP1-221ENST00000610874 SCGB1D4Q6XE38 83 aa13.38□□□□□ -0.27
TNIP1-221ENST00000610874 ZNF815PA8K554 130 aa13.37□□□□□ -0.27
TNIP1-221ENST00000610874 HOXA3O43365 443 aaPredicted RBP13.37□□□□□ -0.27
TNIP1-221ENST00000610874 INSL3P51460 131 aa13.37□□□□□ -0.27
TNIP1-221ENST00000610874 Q5PR19 223 aa13.37□□□□□ -0.27
TNIP1-221ENST00000610874 GPHB5Q86YW7 130 aa13.37□□□□□ -0.27
TNIP1-221ENST00000610874 C20orf78Q9BR46 151 aa13.37□□□□□ -0.27
TNIP1-221ENST00000610874 PGPEP1Q9NXJ5 209 aa13.37□□□□□ -0.27
TNIP1-221ENST00000610874 FLNAP21333 2647 aaKnown RBP13.37□□□□□ -0.27
TNIP1-221ENST00000610874 GNRH2O43555 120 aa13.37□□□□□ -0.27
TNIP1-221ENST00000610874 MORN3Q6PF18 240 aaPredicted RBP13.37□□□□□ -0.27
TNIP1-221ENST00000610874 LINC00477Q96M19 166 aa13.37□□□□□ -0.27
TNIP1-221ENST00000610874 ACANP16112 2415 aa13.37□□□□□ -0.27
TNIP1-221ENST00000610874 MRPL16Q9NX20 251 aaKnown RBP13.36□□□□□ -0.27
TNIP1-221ENST00000610874 LENEPQ9Y5L5 61 aa13.36□□□□□ -0.27
TNIP1-221ENST00000610874 PF4V1P10720 104 aa13.36□□□□□ -0.27
TNIP1-221ENST00000610874 EMP1P54849 157 aa13.36□□□□□ -0.27
TNIP1-221ENST00000610874 PLEKHB2Q96CS7 222 aa13.36□□□□□ -0.27
TNIP1-221ENST00000610874 A0A1B0GWB2 263 aa13.35□□□□□ -0.27
TNIP1-221ENST00000610874 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
TNIP1-221ENST00000610874 PRO0461Q9UI25 63 aa13.35□□□□□ -0.27
TNIP1-221ENST00000610874 CR1P17927 2039 aa13.35□□□□□ -0.27
TNIP1-221ENST00000610874 DEFB113Q30KQ7 82 aa13.35□□□□□ -0.27
TNIP1-221ENST00000610874 KLHL30-AS1Q8NEE0 82 aa13.35□□□□□ -0.27
TNIP1-221ENST00000610874 NF1P21359 2839 aa13.35□□□□□ -0.27
TNIP1-221ENST00000610874 DUSP14O95147 198 aaKnown RBP13.34□□□□□ -0.27
TNIP1-221ENST00000610874 IGHG2P01859 326 aa13.34□□□□□ -0.27
TNIP1-221ENST00000610874 SRSF9Q13242 221 aaKnown RBP eCLIP13.34□□□□□ -0.27
TNIP1-221ENST00000610874 Q96MF0 132 aa13.34□□□□□ -0.27
TNIP1-221ENST00000610874 KMT2BQ9UMN6 2715 aaPredicted RBP13.34□□□□□ -0.27
TNIP1-221ENST00000610874 LINC01619G3V211 115 aa13.34□□□□□ -0.27
TNIP1-221ENST00000610874 C10orf99Q6UWK7 81 aa13.34□□□□□ -0.27
TNIP1-221ENST00000610874 MUC4Q99102 2169 aa13.34□□□□□ -0.27
TNIP1-221ENST00000610874 LINC01549A6NIU2 74 aa13.33□□□□□ -0.28
TNIP1-221ENST00000610874 DUX5Q96PT3 197 aa13.33□□□□□ -0.28
TNIP1-221ENST00000610874 OVOL1O14753 267 aa13.33□□□□□ -0.28
TNIP1-221ENST00000610874 IGHV4-31P0DP07 118 aa13.32□□□□□ -0.28
TNIP1-221ENST00000610874 GATA3P23771 443 aa13.32□□□□□ -0.28
TNIP1-221ENST00000610874 LOC107984156A0A0G2JMH3 177 aa13.32□□□□□ -0.28
TNIP1-221ENST00000610874 FAM223BA6NKX1 122 aa13.32□□□□□ -0.28
TNIP1-221ENST00000610874 RNASE3P12724 160 aaKnown RBP13.32□□□□□ -0.28
TNIP1-221ENST00000610874 ARL17AQ8IVW1 177 aa13.32□□□□□ -0.28
TNIP1-221ENST00000610874 FAM223AQ8IWN6 122 aa13.32□□□□□ -0.28
TNIP1-221ENST00000610874 SOCS3O14543 225 aa13.31□□□□□ -0.28
TNIP1-221ENST00000610874 APOMO95445 188 aa13.31□□□□□ -0.28
TNIP1-221ENST00000610874 SPATA25Q9BR10 227 aa13.31□□□□□ -0.28
TNIP1-221ENST00000610874 SETD2Q9BYW2 2564 aaPredicted RBP13.31□□□□□ -0.28
TNIP1-221ENST00000610874 SRD5A1P18405 259 aa13.3□□□□□ -0.28
TNIP1-221ENST00000610874 TP53TG1Q9Y2A0 90 aa13.3□□□□□ -0.28
TNIP1-221ENST00000610874 TMEM238LA0A1B0GVL6 79 aa13.3□□□□□ -0.28
TNIP1-221ENST00000610874 C11orf86A6NJI1 115 aa13.3□□□□□ -0.28
TNIP1-221ENST00000610874 A6NJY4 79 aa13.3□□□□□ -0.28
TNIP1-221ENST00000610874 CRYGDP07320 174 aa13.3□□□□□ -0.28
TNIP1-221ENST00000610874 WFDC12Q8WWY7 111 aa13.3□□□□□ -0.28
TNIP1-221ENST00000610874 JPT2Q9H910 190 aa13.3□□□□□ -0.28
TNIP1-221ENST00000610874 PSMB2P49721 201 aa13.29□□□□□ -0.28
TNIP1-221ENST00000610874 BEX4Q9NWD9 120 aaPredicted RBP13.29□□□□□ -0.28
TNIP1-221ENST00000610874 GCN1Q92616 2671 aaKnown RBP13.29□□□□□ -0.28
TNIP1-221ENST00000610874 NDUFA4O00483 81 aa13.28□□□□□ -0.28
TNIP1-221ENST00000610874 CIDEAO60543 219 aa13.28□□□□□ -0.28
TNIP1-221ENST00000610874 SCGB1A1P11684 91 aa13.28□□□□□ -0.28
TNIP1-221ENST00000610874 RPL39P62891 51 aaKnown RBP13.28□□□□□ -0.28
TNIP1-221ENST00000610874 DLX4Q92988 240 aaPredicted RBP13.28□□□□□ -0.28
TNIP1-221ENST00000610874 HECTD1Q9ULT8 2610 aa13.28□□□□□ -0.28
TNIP1-221ENST00000610874 TSPAN13O95857 204 aa13.28□□□□□ -0.28
TNIP1-221ENST00000610874 TSHBP01222 138 aa13.28□□□□□ -0.28
TNIP1-221ENST00000610874 CRIP2P52943 208 aaPredicted RBP13.28□□□□□ -0.28
TNIP1-221ENST00000610874 ZFP2Q6ZN57 461 aa13.28□□□□□ -0.28
TNIP1-221ENST00000610874 NOTCH2Q04721 2471 aa13.28□□□□□ -0.28
TNIP1-221ENST00000610874 A0A087WWL8 130 aa13.27□□□□□ -0.28
TNIP1-221ENST00000610874 ZNF418Q8TF45 676 aaPredicted RBP13.27□□□□□ -0.28
TNIP1-221ENST00000610874 MTORP42345 2549 aa13.27□□□□□ -0.28
TNIP1-221ENST00000610874 IGLV4-69A0A075B6H9 119 aa13.27□□□□□ -0.29
TNIP1-221ENST00000610874 WFDC11Q8NEX6 87 aa13.27□□□□□ -0.29
TNIP1-221ENST00000610874 F5H697 171 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 PPP1R17O96001 155 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 MED14OSP0DP75 135 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 EDN2P20800 178 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 SMCPP49901 116 aaPredicted RBP13.26□□□□□ -0.29
TNIP1-221ENST00000610874 UBE2D1P51668 147 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 CFAP126Q5VTH2 177 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 FAM19A4Q96LR4 140 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 AKAP9Q99996 3911 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 PDZD2O15018 2839 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 HERVK_113P61574 105 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 KRTAP1-3Q8IUG1 177 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 ATP6V0BQ99437 205 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 RHPN1-AS1Q9BWJ2 59 aa13.26□□□□□ -0.29
TNIP1-221ENST00000610874 UNC79Q9P2D8 2635 aa13.25□□□□□ -0.29
TNIP1-221ENST00000610874 LINC00315P59091 139 aa13.25□□□□□ -0.29
TNIP1-221ENST00000610874 FOXI1Q12951 378 aa13.25□□□□□ -0.29
TNIP1-221ENST00000610874 TMEM170BQ5T4T1 132 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms