RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 MSRB1Q9NZV6 116 aa13.06□□□□□ -0.32
TCF3-219ENST00000610756 Q9UF83 564 aa13.06□□□□□ -0.32
TCF3-219ENST00000610756 A0A087WWL8 130 aa13.05□□□□□ -0.32
TCF3-219ENST00000610756 C16orf90A8MZG2 172 aa13.05□□□□□ -0.32
TCF3-219ENST00000610756 LINC00694P0DN24 101 aa13.05□□□□□ -0.32
TCF3-219ENST00000610756 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
TCF3-219ENST00000610756 LINC01556Q5JQF7 62 aa13.05□□□□□ -0.32
TCF3-219ENST00000610756 OR10J3Q5JRS4 329 aa13.05□□□□□ -0.32
TCF3-219ENST00000610756 FAM74A4Q5TZK3 123 aa13.05□□□□□ -0.32
TCF3-219ENST00000610756 PRR27Q6MZM9 219 aa13.05□□□□□ -0.32
TCF3-219ENST00000610756 SMIM12Q96EX1 92 aa13.05□□□□□ -0.32
TCF3-219ENST00000610756 VAX2Q9UIW0 290 aa13.05□□□□□ -0.32
TCF3-219ENST00000610756 GAGE12JA6NER3 117 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 SNAI2O43623 268 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 IGLV2-8P01709 118 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 OR5AL1P0C617 328 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 BCL2P10415 239 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 GAGE1Q13065 139 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 GAGE4Q13068 117 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 GAGE5Q13069 117 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 GAGE13Q4V321 117 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 CENPWQ5EE01 88 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 SPATA12Q7Z6I5 190 aa13.04□□□□□ -0.32
TCF3-219ENST00000610756 RAB19A4D1S5 217 aa13.03□□□□□ -0.32
TCF3-219ENST00000610756 MED9Q9NWA0 146 aa13.03□□□□□ -0.32
TCF3-219ENST00000610756 GNG4P50150 75 aa13.02□□□□□ -0.33
TCF3-219ENST00000610756 OR10AG1Q8NH19 301 aa13.02□□□□□ -0.33
TCF3-219ENST00000610756 LRP1BQ9NZR2 4599 aa13.01□□□□□ -0.33
TCF3-219ENST00000610756 A0A087WWC5 75 aa13.01□□□□□ -0.33
TCF3-219ENST00000610756 IBA57-AS1B1ANH7 110 aa13.01□□□□□ -0.33
TCF3-219ENST00000610756 DAZAP1Q96EP5 407 aaKnown RBP13.01□□□□□ -0.33
TCF3-219ENST00000610756 TRBV10-1A0A0K0K1A3 114 aa13□□□□□ -0.33
TCF3-219ENST00000610756 C19orf71A6NCJ1 209 aa13□□□□□ -0.33
TCF3-219ENST00000610756 KRTAP10-2P60368 255 aa13□□□□□ -0.33
TCF3-219ENST00000610756 BLOC1S1P78537 153 aa13□□□□□ -0.33
TCF3-219ENST00000610756 TRBV20OR9-2A0A075B6H5 130 aa12.99□□□□□ -0.33
TCF3-219ENST00000610756 EREGO14944 169 aa12.99□□□□□ -0.33
TCF3-219ENST00000610756 ERVFC1-1P60608 527 aa12.99□□□□□ -0.33
TCF3-219ENST00000610756 RPS20P60866 119 aaKnown RBP12.99□□□□□ -0.33
TCF3-219ENST00000610756 RAB4BP61018 213 aa12.99□□□□□ -0.33
TCF3-219ENST00000610756 SPANXN1Q5VSR9 72 aa12.99□□□□□ -0.33
TCF3-219ENST00000610756 ALKAL2Q6UX46 152 aa12.99□□□□□ -0.33
TCF3-219ENST00000610756 BIN3Q9NQY0 253 aa12.99□□□□□ -0.33
TCF3-219ENST00000610756 PGPEP1Q9NXJ5 209 aa12.99□□□□□ -0.33
TCF3-219ENST00000610756 RYR1P21817 5038 aa12.98□□□□□ -0.33
TCF3-219ENST00000610756 LYPD6BQ8NI32 183 aa12.98□□□□□ -0.33
TCF3-219ENST00000610756 MUC21A0A0G2JKD1 596 aa12.97□□□□□ -0.33
TCF3-219ENST00000610756 MUC21A0A140T8X8 626 aa12.97□□□□□ -0.33
TCF3-219ENST00000610756 TRBV7-3A0A075B6L6 115 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 A0A087WTM6 91 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 A0A1B0GVG6 124 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 CDK2AP2O75956 126 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 IGHV3-30P01768 117 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 IGHV3-33P01772 117 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 IGLC6P0CF74 106 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 IGHV3-30-3P0DP02 117 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 IGHV3-30-5P0DP03 117 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 RPL36AP83881 106 aaKnown RBP12.96□□□□□ -0.33
TCF3-219ENST00000610756 OR2D3Q8NGH3 330 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 OR10G8Q8NGN5 311 aa12.96□□□□□ -0.33
TCF3-219ENST00000610756 RPL36ALQ969Q0 106 aaKnown RBP12.96□□□□□ -0.33
TCF3-219ENST00000610756 XKRY2A2RUG3 117 aa12.95□□□□□ -0.34
TCF3-219ENST00000610756 P01737 135 aa12.95□□□□□ -0.34
TCF3-219ENST00000610756 GZMBP10144 247 aa12.95□□□□□ -0.34
TCF3-219ENST00000610756 KIF25-AS1Q9Y6Z4 181 aa12.95□□□□□ -0.34
TCF3-219ENST00000610756 DNAH5Q8TE73 4624 aa12.95□□□□□ -0.34
TCF3-219ENST00000610756 RBFOX3A6NFN3 312 aa12.94□□□□□ -0.34
TCF3-219ENST00000610756 UBE2D3P61077 147 aa12.94□□□□□ -0.34
TCF3-219ENST00000610756 SSTP61278 116 aa12.94□□□□□ -0.34
TCF3-219ENST00000610756 UBE2D2P62837 147 aa12.94□□□□□ -0.34
TCF3-219ENST00000610756 LAGE3Q14657 143 aa12.94□□□□□ -0.34
TCF3-219ENST00000610756 FER1L6-AS1Q8NA97 138 aa12.94□□□□□ -0.34
TCF3-219ENST00000610756 F2Z2F3 143 aa12.93□□□□□ -0.34
TCF3-219ENST00000610756 TMEM250H0YL14 139 aa12.93□□□□□ -0.34
TCF3-219ENST00000610756 NKX2-5P52952 324 aaPredicted RBP12.93□□□□□ -0.34
TCF3-219ENST00000610756 ZNF56Q15929 161 aa12.93□□□□□ -0.34
TCF3-219ENST00000610756 NUDT10Q8NFP7 164 aa12.93□□□□□ -0.34
TCF3-219ENST00000610756 NUDT11Q96G61 164 aa12.93□□□□□ -0.34
TCF3-219ENST00000610756 SMIM17P0DL12 118 aa12.92□□□□□ -0.34
TCF3-219ENST00000610756 CACNG7P62955 275 aa12.92□□□□□ -0.34
TCF3-219ENST00000610756 CDPF1Q6NVV7 123 aa12.92□□□□□ -0.34
TCF3-219ENST00000610756 OCC1Q8TAD7 63 aa12.92□□□□□ -0.34
TCF3-219ENST00000610756 TPPP3Q9BW30 176 aa12.92□□□□□ -0.34
TCF3-219ENST00000610756 HSPG2P98160 4391 aa12.92□□□□□ -0.34
TCF3-219ENST00000610756 F5H697 171 aa12.91□□□□□ -0.34
TCF3-219ENST00000610756 PSCAO43653 123 aa12.91□□□□□ -0.34
TCF3-219ENST00000610756 Q8N3U1 123 aa12.91□□□□□ -0.34
TCF3-219ENST00000610756 NEXN-AS1Q8NBZ9 246 aa12.91□□□□□ -0.34
TCF3-219ENST00000610756 AP1S3Q96PC3 154 aa12.91□□□□□ -0.34
TCF3-219ENST00000610756 WDR73Q6P4I2 378 aa12.9□□□□□ -0.34
TCF3-219ENST00000610756 DAZ4Q86SG3 579 aaKnown RBP12.9□□□□□ -0.34
TCF3-219ENST00000610756 NIT1Q86X76 327 aa12.9□□□□□ -0.34
TCF3-219ENST00000610756 Q9HAA7 133 aa12.9□□□□□ -0.34
TCF3-219ENST00000610756 DAZ3Q9NR90 486 aaKnown RBP12.9□□□□□ -0.34
TCF3-219ENST00000610756 PCLOQ9Y6V0 5065 aa12.9□□□□□ -0.34
TCF3-219ENST00000610756 TRAV8-3A0A0A6YYJ7 113 aa12.89□□□□□ -0.35
TCF3-219ENST00000610756 LRCOL1A6NCL2 159 aa12.89□□□□□ -0.35
TCF3-219ENST00000610756 K7EN84 100 aa12.89□□□□□ -0.35
TCF3-219ENST00000610756 TOR2AQ5JU69 321 aa12.89□□□□□ -0.35
TCF3-219ENST00000610756 LYZL1Q6UWQ5 148 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms