RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 IGIPA6NJ69 53 aa12.74□□□□□ -0.37
TNIP1-220ENST00000610535 IGHV3-11P01762 117 aa12.74□□□□□ -0.37
TNIP1-220ENST00000610535 CARD19Q96LW7 228 aa12.74□□□□□ -0.37
TNIP1-220ENST00000610535 NPFFO15130 113 aa12.73□□□□□ -0.37
TNIP1-220ENST00000610535 SRD5A1P18405 259 aa12.73□□□□□ -0.37
TNIP1-220ENST00000610535 GEMIN7Q9H840 131 aaKnown RBP12.73□□□□□ -0.37
TNIP1-220ENST00000610535 IGSF10Q6WRI0 2623 aa12.73□□□□□ -0.37
TNIP1-220ENST00000610535 A0A087WWL8 130 aa12.73□□□□□ -0.37
TNIP1-220ENST00000610535 TCL1BO95988 128 aa12.73□□□□□ -0.37
TNIP1-220ENST00000610535 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
TNIP1-220ENST00000610535 XGP55808 180 aa12.72□□□□□ -0.37
TNIP1-220ENST00000610535 TMEM170BQ5T4T1 132 aa12.72□□□□□ -0.37
TNIP1-220ENST00000610535 CFC1BP0CG36 223 aa12.72□□□□□ -0.37
TNIP1-220ENST00000610535 CFC1P0CG37 223 aa12.72□□□□□ -0.37
TNIP1-220ENST00000610535 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
TNIP1-220ENST00000610535 ATP6V0E2Q8NHE4 81 aa12.72□□□□□ -0.37
TNIP1-220ENST00000610535 FAM19A4Q96LR4 140 aa12.72□□□□□ -0.37
TNIP1-220ENST00000610535 PMVKQ15126 192 aa12.71□□□□□ -0.37
TNIP1-220ENST00000610535 F5H697 171 aa12.71□□□□□ -0.38
TNIP1-220ENST00000610535 UCNP55089 124 aa12.71□□□□□ -0.38
TNIP1-220ENST00000610535 ZNRF2Q8NHG8 242 aa12.71□□□□□ -0.38
TNIP1-220ENST00000610535 UBTD1Q9HAC8 227 aa12.71□□□□□ -0.38
TNIP1-220ENST00000610535 FAM223BA6NKX1 122 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 SUMO4Q6EEV6 95 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 FAM223AQ8IWN6 122 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 KIR2DL4Q99706 377 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 BPESC1Q9GZL8 116 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 PPP1R17O96001 155 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 IGHV3-30P01768 117 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 IGHV3-30-5P0DP03 117 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 POLR2KP53803 58 aaKnown RBP12.7□□□□□ -0.38
TNIP1-220ENST00000610535 HERVK_113P61574 105 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 LMO4P61968 165 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 C19orf54Q5BKX5 351 aa12.7□□□□□ -0.38
TNIP1-220ENST00000610535 USP9XQ93008 2570 aaPredicted RBP12.7□□□□□ -0.38
TNIP1-220ENST00000610535 SCGB1C2P0DMR2 95 aa12.69□□□□□ -0.38
TNIP1-220ENST00000610535 MED14OSP0DP75 135 aa12.69□□□□□ -0.38
TNIP1-220ENST00000610535 Q6ZUT4 128 aa12.69□□□□□ -0.38
TNIP1-220ENST00000610535 POLQO75417 2590 aa12.69□□□□□ -0.38
TNIP1-220ENST00000610535 CRYBA4P53673 196 aa12.69□□□□□ -0.38
TNIP1-220ENST00000610535 IGHV4OR15-8A0A075B7B6 117 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 A0A087WW49 117 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 NDUFA4O00483 81 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 BRD3OSQ6XYD6 125 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 SLC25A29Q8N8R3 303 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 OPRPNQ99935 248 aaPredicted RBP12.68□□□□□ -0.38
TNIP1-220ENST00000610535 IGHV1-69DA0A0B4J2H0 117 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 H7C2G1 150 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 EDN2P20800 178 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 TEN1Q86WV5 123 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 POM121L12Q8N7R1 296 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 RAX2Q96IS3 184 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 MOB4Q9Y3A3 225 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 SDHAF1A6NFY7 115 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 PPDPFLQ8WWR9 84 aa12.68□□□□□ -0.38
TNIP1-220ENST00000610535 IGHV3-64A0A075B6Q5 118 aa12.67□□□□□ -0.38
TNIP1-220ENST00000610535 C19orf84I3L1E1 186 aa12.67□□□□□ -0.38
TNIP1-220ENST00000610535 PAPPA-AS1Q5QFB9 102 aa12.67□□□□□ -0.38
TNIP1-220ENST00000610535 APRG1Q8IVJ8 170 aa12.67□□□□□ -0.38
TNIP1-220ENST00000610535 RHPN1-AS1Q9BWJ2 59 aa12.67□□□□□ -0.38
TNIP1-220ENST00000610535 ZNF256Q9Y2P7 627 aaPredicted RBP12.67□□□□□ -0.38
TNIP1-220ENST00000610535 VCYO14598 125 aa12.67□□□□□ -0.38
TNIP1-220ENST00000610535 FAM74A4Q5TZK3 123 aa12.67□□□□□ -0.38
TNIP1-220ENST00000610535 C10orf126Q8N4M7 172 aa12.67□□□□□ -0.38
TNIP1-220ENST00000610535 AMELXQ99217 191 aa12.67□□□□□ -0.38
TNIP1-220ENST00000610535 NXPH4O95158 308 aa12.66□□□□□ -0.38
TNIP1-220ENST00000610535 GNLYP22749 145 aa12.66□□□□□ -0.38
TNIP1-220ENST00000610535 FAM159AQ6UWV7 190 aa12.66□□□□□ -0.38
TNIP1-220ENST00000610535 ANKRD29Q8N6D5 301 aa12.66□□□□□ -0.38
TNIP1-220ENST00000610535 FAM208BQ5VWN6 2430 aa12.66□□□□□ -0.38
TNIP1-220ENST00000610535 LY6EQ16553 131 aa12.66□□□□□ -0.38
TNIP1-220ENST00000610535 TRAV12-3A0A0B4J271 114 aa12.65□□□□□ -0.38
TNIP1-220ENST00000610535 A8MWV9 139 aa12.65□□□□□ -0.38
TNIP1-220ENST00000610535 J3QQQ9 107 aa12.65□□□□□ -0.38
TNIP1-220ENST00000610535 PRO1854Q9UHT4 67 aa12.65□□□□□ -0.38
TNIP1-220ENST00000610535 ZNF876PQ49A33 203 aa12.65□□□□□ -0.38
TNIP1-220ENST00000610535 LYRM7Q5U5X0 104 aa12.65□□□□□ -0.38
TNIP1-220ENST00000610535 TMEM141Q96I45 108 aa12.65□□□□□ -0.38
TNIP1-220ENST00000610535 EIF4EBP3O60516 100 aaPredicted RBP12.64□□□□□ -0.39
TNIP1-220ENST00000610535 PF4V1P10720 104 aa12.64□□□□□ -0.39
TNIP1-220ENST00000610535 CRIP2P52943 208 aaPredicted RBP12.64□□□□□ -0.39
TNIP1-220ENST00000610535 TIMM17AQ99595 171 aa12.64□□□□□ -0.39
TNIP1-220ENST00000610535 TRBV20-1A0A075B6N2 111 aa12.63□□□□□ -0.39
TNIP1-220ENST00000610535 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
TNIP1-220ENST00000610535 TRPT1Q86TN4 253 aaKnown RBP12.63□□□□□ -0.39
TNIP1-220ENST00000610535 A4D1N5 150 aa12.63□□□□□ -0.39
TNIP1-220ENST00000610535 KLLNB2CW77 178 aa12.63□□□□□ -0.39
TNIP1-220ENST00000610535 LGALS3P17931 250 aaKnown RBP12.63□□□□□ -0.39
TNIP1-220ENST00000610535 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
TNIP1-220ENST00000610535 SBSPONQ8IVN8 264 aa12.62□□□□□ -0.39
TNIP1-220ENST00000610535 SORL1Q92673 2214 aa12.61□□□□□ -0.39
TNIP1-220ENST00000610535 TRBV27A0A0K0K1C4 114 aa12.61□□□□□ -0.39
TNIP1-220ENST00000610535 C9JAW5 83 aa12.61□□□□□ -0.39
TNIP1-220ENST00000610535 IGKV3-20P01619 116 aa12.61□□□□□ -0.39
TNIP1-220ENST00000610535 ZNF688P0C7X2 276 aa12.61□□□□□ -0.39
TNIP1-220ENST00000610535 GATA3P23771 443 aa12.61□□□□□ -0.39
TNIP1-220ENST00000610535 RNF183Q96D59 192 aa12.61□□□□□ -0.39
TNIP1-220ENST00000610535 MDFICQ9P1T7 246 aa12.61□□□□□ -0.39
TNIP1-220ENST00000610535 TRAV2A0A0B4J234 112 aa12.61□□□□□ -0.39
TNIP1-220ENST00000610535 BLCAPP62952 87 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms