RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 KRTAP4-5Q9BYR2 181 aa12.19□□□□□ -0.46
CCDC12-208ENST00000603885 M0R381 172 aa12.18□□□□□ -0.46
CCDC12-208ENST00000603885 IGHV3-30P01768 117 aa12.18□□□□□ -0.46
CCDC12-208ENST00000603885 IGHV3-33P01772 117 aa12.18□□□□□ -0.46
CCDC12-208ENST00000603885 IGHV3-30-3P0DP02 117 aa12.18□□□□□ -0.46
CCDC12-208ENST00000603885 IGHV3-30-5P0DP03 117 aa12.18□□□□□ -0.46
CCDC12-208ENST00000603885 FUSP35637 526 aaKnown RBP eCLIP12.18□□□□□ -0.461e-8■■■■□ 25.3
CCDC12-208ENST00000603885 ZFP82Q8N141 532 aa12.18□□□□□ -0.46
CCDC12-208ENST00000603885 C14orf178Q8N769 122 aaPredicted RBP12.18□□□□□ -0.46
CCDC12-208ENST00000603885 SFRP2Q96HF1 295 aa12.18□□□□□ -0.46
CCDC12-208ENST00000603885 A0A087WWL8 130 aa12.17□□□□□ -0.46
CCDC12-208ENST00000603885 BAGE2Q86Y30 109 aa12.17□□□□□ -0.46
CCDC12-208ENST00000603885 Q9HAA7 133 aa12.17□□□□□ -0.46
CCDC12-208ENST00000603885 MLST8Q9BVC4 326 aa12.16□□□□□ -0.46
CCDC12-208ENST00000603885 MANBALQ9NQG1 85 aa12.16□□□□□ -0.46
CCDC12-208ENST00000603885 Q9UF83 564 aa12.16□□□□□ -0.46
CCDC12-208ENST00000603885 A0A087WWC5 75 aa12.15□□□□□ -0.46
CCDC12-208ENST00000603885 RAB5CP51148 216 aa12.15□□□□□ -0.46
CCDC12-208ENST00000603885 LAGE3Q14657 143 aa12.15□□□□□ -0.46
CCDC12-208ENST00000603885 EIF5AL1Q6IS14 154 aaKnown RBP12.15□□□□□ -0.46
CCDC12-208ENST00000603885 Q8N1X5 172 aa12.15□□□□□ -0.46
CCDC12-208ENST00000603885 CXCL1P09341 107 aa12.14□□□□□ -0.47
CCDC12-208ENST00000603885 RPL19P84098 196 aaKnown RBP12.14□□□□□ -0.47
CCDC12-208ENST00000603885 GNG13Q9P2W3 67 aa12.14□□□□□ -0.47
CCDC12-208ENST00000603885 TRAV1-1A0A0B4J248 108 aa12.13□□□□□ -0.47
CCDC12-208ENST00000603885 TEX46H3BTG2 121 aa12.13□□□□□ -0.47
CCDC12-208ENST00000603885 PRR27Q6MZM9 219 aa12.13□□□□□ -0.47
CCDC12-208ENST00000603885 TRBV10-1A0A0K0K1A3 114 aa12.12□□□□□ -0.47
CCDC12-208ENST00000603885 LRCOL1A6NCL2 159 aa12.12□□□□□ -0.47
CCDC12-208ENST00000603885 RPL35P42766 123 aaKnown RBP12.12□□□□□ -0.47
CCDC12-208ENST00000603885 CCL20P78556 96 aa12.12□□□□□ -0.47
CCDC12-208ENST00000603885 TCTE3Q8IZS6 198 aa12.12□□□□□ -0.47
CCDC12-208ENST00000603885 Q8N3U1 123 aa12.12□□□□□ -0.47
CCDC12-208ENST00000603885 OR10AG1Q8NH19 301 aa12.11□□□□□ -0.47
CCDC12-208ENST00000603885 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
CCDC12-208ENST00000603885 TM2D2Q9BX73 214 aa12.11□□□□□ -0.47
CCDC12-208ENST00000603885 SNAI2O43623 268 aa12.1□□□□□ -0.47
CCDC12-208ENST00000603885 SULT1A2P50226 295 aa12.1□□□□□ -0.47
CCDC12-208ENST00000603885 RPL36AP83881 106 aaKnown RBP12.1□□□□□ -0.47
CCDC12-208ENST00000603885 TOR2AQ5JU69 321 aa12.1□□□□□ -0.47
CCDC12-208ENST00000603885 RPL36ALQ969Q0 106 aaKnown RBP12.1□□□□□ -0.47
CCDC12-208ENST00000603885 DERL1Q9BUN8 251 aa12.1□□□□□ -0.47
CCDC12-208ENST00000603885 URGCP-MRPS24S4R325 110 aa12.1□□□□□ -0.47
CCDC12-208ENST00000603885 TRAV8-3A0A0A6YYJ7 113 aa12.09□□□□□ -0.47
CCDC12-208ENST00000603885 OR5AL1P0C617 328 aa12.09□□□□□ -0.47
CCDC12-208ENST00000603885 GCSHP23434 173 aa12.09□□□□□ -0.47
CCDC12-208ENST00000603885 KRTAP10-1P60331 282 aa12.09□□□□□ -0.47
CCDC12-208ENST00000603885 RAB4BP61018 213 aa12.09□□□□□ -0.47
CCDC12-208ENST00000603885 SPANXN1Q5VSR9 72 aa12.09□□□□□ -0.47
CCDC12-208ENST00000603885 DAZ4Q86SG3 579 aaKnown RBP12.09□□□□□ -0.47
CCDC12-208ENST00000603885 NTN5Q8WTR8 489 aaPredicted RBP12.09□□□□□ -0.47
CCDC12-208ENST00000603885 SSBP4Q9BWG4 385 aaPredicted RBP12.09□□□□□ -0.47
CCDC12-208ENST00000603885 DAZ3Q9NR90 486 aaKnown RBP12.09□□□□□ -0.47
CCDC12-208ENST00000603885 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.48
CCDC12-208ENST00000603885 IGLV5-52A0A0A0MRZ9 124 aa12.08□□□□□ -0.48
CCDC12-208ENST00000603885 ZNF56Q15929 161 aa12.08□□□□□ -0.48
CCDC12-208ENST00000603885 CENPWQ5EE01 88 aa12.08□□□□□ -0.48
CCDC12-208ENST00000603885 IFNA1P01562 189 aa12.07□□□□□ -0.48
CCDC12-208ENST00000603885 C1QBP02746 253 aa12.07□□□□□ -0.48
CCDC12-208ENST00000603885 UBE2D3P61077 147 aa12.07□□□□□ -0.48
CCDC12-208ENST00000603885 UBE2D2P62837 147 aa12.07□□□□□ -0.48
CCDC12-208ENST00000603885 SLC51BQ86UW2 128 aa12.07□□□□□ -0.48
CCDC12-208ENST00000603885 NIT1Q86X76 327 aa12.07□□□□□ -0.48
CCDC12-208ENST00000603885 Q8N814 137 aa12.07□□□□□ -0.48
CCDC12-208ENST00000603885 OR10G8Q8NGN5 311 aa12.07□□□□□ -0.48
CCDC12-208ENST00000603885 MUC21A0A0G2JKD1 596 aa12.06□□□□□ -0.48
CCDC12-208ENST00000603885 MUC21A0A140T8X8 626 aa12.06□□□□□ -0.48
CCDC12-208ENST00000603885 MEF2BQ02080 365 aaPredicted RBP12.06□□□□□ -0.48
CCDC12-208ENST00000603885 DAZAP1Q96EP5 407 aaKnown RBP12.06□□□□□ -0.48
CCDC12-208ENST00000603885 PDE6DO43924 150 aa12.05□□□□□ -0.48
CCDC12-208ENST00000603885 XGP55808 180 aa12.05□□□□□ -0.48
CCDC12-208ENST00000603885 KCNIP4Q6PIL6 250 aa12.05□□□□□ -0.48
CCDC12-208ENST00000603885 SMIM12Q96EX1 92 aa12.05□□□□□ -0.48
CCDC12-208ENST00000603885 A0A087WX48 190 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 F5H697 171 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 IGLV2-8P01709 118 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 SMIM17P0DL12 118 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 GNG4P50150 75 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 RPS20P60866 119 aaKnown RBP12.04□□□□□ -0.48
CCDC12-208ENST00000603885 SSTP61278 116 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 NEXN-AS1Q8NBZ9 246 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 RMI2Q96E14 147 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 AP1S3Q96PC3 154 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 CHCHD7Q9BUK0 85 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 COX11Q9Y6N1 276 aa12.04□□□□□ -0.48
CCDC12-208ENST00000603885 RAB19A4D1S5 217 aa12.03□□□□□ -0.48
CCDC12-208ENST00000603885 BCL2P10415 239 aa12.03□□□□□ -0.48
CCDC12-208ENST00000603885 Q6ZNX1 250 aa12.03□□□□□ -0.48
CCDC12-208ENST00000603885 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.03□□□□□ -0.48
CCDC12-208ENST00000603885 OR2D3Q8NGH3 330 aa12.03□□□□□ -0.48
CCDC12-208ENST00000603885 MED9Q9NWA0 146 aa12.03□□□□□ -0.48
CCDC12-208ENST00000603885 EPM2AB3EWF7 344 aa12.02□□□□□ -0.49
CCDC12-208ENST00000603885 ELOBQ15370 118 aa12.02□□□□□ -0.49
CCDC12-208ENST00000603885 FER1L6-AS1Q8NA97 138 aa12.02□□□□□ -0.49
CCDC12-208ENST00000603885 TPPP3Q9BW30 176 aa12.02□□□□□ -0.49
CCDC12-208ENST00000603885 VAX2Q9UIW0 290 aa12.02□□□□□ -0.49
CCDC12-208ENST00000603885 KLK12Q9UKR0 248 aa12.02□□□□□ -0.49
CCDC12-208ENST00000603885 TRBV6-8A0A0A6YYG3 113 aa12.01□□□□□ -0.49
CCDC12-208ENST00000603885 C19orf71A6NCJ1 209 aa12.01□□□□□ -0.49
CCDC12-208ENST00000603885 IGLC6P0CF74 106 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms