RNA–Protein interactions for RNA: ENST00000601803.5

DDX49-212, Transcript of DEAD-box helicase 49, humanhuman

TSL 2

Gene DDX49, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-212ENST00000601803 ZNF876PQ49A33 203 aa12.59□□□□□ -0.39
DDX49-212ENST00000601803 NFE4Q86UQ8 179 aa12.59□□□□□ -0.39
DDX49-212ENST00000601803 CACNA1BQ00975 2339 aa12.59□□□□□ -0.39
DDX49-212ENST00000601803 IGF2RP11717 2491 aa12.58□□□□□ -0.4
DDX49-212ENST00000601803 DCHS1Q96JQ0 3298 aa12.58□□□□□ -0.4
DDX49-212ENST00000601803 TACC2O95359 2948 aa12.57□□□□□ -0.4
DDX49-212ENST00000601803 SPRY2O43597 315 aa12.57□□□□□ -0.4
DDX49-212ENST00000601803 LYRM7Q5U5X0 104 aa12.57□□□□□ -0.4
DDX49-212ENST00000601803 Q8N1Y9 231 aa12.57□□□□□ -0.4
DDX49-212ENST00000601803 Q8N2B8 174 aa12.57□□□□□ -0.4
DDX49-212ENST00000601803 NAA38Q9BRA0 125 aaKnown RBP12.57□□□□□ -0.4
DDX49-212ENST00000601803 COL6A6A6NMZ7 2263 aa12.57□□□□□ -0.4
DDX49-212ENST00000601803 I3L3M4 83 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 J3QR89 54 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 TGFAP01135 160 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 COTL1Q14019 142 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 TMEM95Q3KNT9 176 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 AMTNQ6UX39 209 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 ZNF702PQ9H963 129 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 A0A087WWL8 130 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 K7ERJ3 54 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 SYNJ2BPP57105 145 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 Q5PR19 223 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 SCGB1D4Q6XE38 83 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 LINC00467Q9BRT7 94 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 MDFICQ9P1T7 246 aa12.56□□□□□ -0.4
DDX49-212ENST00000601803 EDN2P20800 178 aa12.55□□□□□ -0.4
DDX49-212ENST00000601803 HOXD3P31249 432 aaPredicted RBP12.55□□□□□ -0.4
DDX49-212ENST00000601803 UBE2D1P51668 147 aa12.55□□□□□ -0.4
DDX49-212ENST00000601803 ZNF56Q15929 161 aa12.55□□□□□ -0.4
DDX49-212ENST00000601803 LRRC75A-AS1Q8N1F1 130 aa12.55□□□□□ -0.4
DDX49-212ENST00000601803 JPT2Q9H910 190 aa12.55□□□□□ -0.4
DDX49-212ENST00000601803 PYGO1Q9Y3Y4 419 aa12.55□□□□□ -0.4
DDX49-212ENST00000601803 SPTBN1Q01082 2364 aaKnown RBP12.54□□□□□ -0.4
DDX49-212ENST00000601803 SPAG8Q99932 426 aaPredicted RBP12.54□□□□□ -0.4
DDX49-212ENST00000601803 BEX4Q9NWD9 120 aaPredicted RBP12.54□□□□□ -0.4
DDX49-212ENST00000601803 PEMTQ9UBM1 199 aa12.54□□□□□ -0.4
DDX49-212ENST00000601803 SAP30O75446 220 aa12.53□□□□□ -0.4
DDX49-212ENST00000601803 SRSF9Q13242 221 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDX49-212ENST00000601803 C20orf203Q8NBC4 194 aa12.53□□□□□ -0.4
DDX49-212ENST00000601803 MUC4Q99102 2169 aa12.53□□□□□ -0.4
DDX49-212ENST00000601803 MED13LQ71F56 2210 aa12.52□□□□□ -0.4
DDX49-212ENST00000601803 A0A0J9YY99 117 aa12.52□□□□□ -0.4
DDX49-212ENST00000601803 ATRXP46100 2492 aa12.52□□□□□ -0.4
DDX49-212ENST00000601803 MORN3Q6PF18 240 aaPredicted RBP12.52□□□□□ -0.4
DDX49-212ENST00000601803 TEX29Q8N6K0 151 aa12.52□□□□□ -0.4
DDX49-212ENST00000601803 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.4
DDX49-212ENST00000601803 WFDC12Q8WWY7 111 aa12.52□□□□□ -0.4
DDX49-212ENST00000601803 CLUHP3Q96NS8 147 aa12.52□□□□□ -0.4
DDX49-212ENST00000601803 A8MWV9 139 aa12.52□□□□□ -0.41
DDX49-212ENST00000601803 LEPROTO15243 131 aa12.52□□□□□ -0.41
DDX49-212ENST00000601803 SPINK13Q1W4C9 94 aa12.52□□□□□ -0.41
DDX49-212ENST00000601803 CD300EQ496F6 205 aaPredicted RBP12.52□□□□□ -0.41
DDX49-212ENST00000601803 TCTEX1D4Q5JR98 221 aa12.52□□□□□ -0.41
DDX49-212ENST00000601803 GAGE13Q4V321 117 aa12.51□□□□□ -0.41
DDX49-212ENST00000601803 FAM74A4Q5TZK3 123 aa12.51□□□□□ -0.41
DDX49-212ENST00000601803 TRAV12-2A0A075B6T6 113 aa12.5□□□□□ -0.41
DDX49-212ENST00000601803 IGHV4-31P0DP07 118 aa12.5□□□□□ -0.41
DDX49-212ENST00000601803 RPL39P62891 51 aaKnown RBP12.5□□□□□ -0.41
DDX49-212ENST00000601803 C10orf99Q6UWK7 81 aa12.5□□□□□ -0.41
DDX49-212ENST00000601803 PLEKHB2Q96CS7 222 aa12.5□□□□□ -0.41
DDX49-212ENST00000601803 NBASA2RRP1 2371 aa12.49□□□□□ -0.41
DDX49-212ENST00000601803 J3QQQ9 107 aa12.49□□□□□ -0.41
DDX49-212ENST00000601803 LGALS3P17931 250 aaKnown RBP12.49□□□□□ -0.41
DDX49-212ENST00000601803 TMEM170BQ5T4T1 132 aa12.49□□□□□ -0.41
DDX49-212ENST00000601803 TMEM86BQ8N661 226 aa12.49□□□□□ -0.41
DDX49-212ENST00000601803 TMEM223A0PJW6 202 aa12.48□□□□□ -0.41
DDX49-212ENST00000601803 M0R2P5 195 aa12.48□□□□□ -0.41
DDX49-212ENST00000601803 C4orf3Q8WVX3 66 aa12.48□□□□□ -0.41
DDX49-212ENST00000601803 DLX4Q92988 240 aaPredicted RBP12.48□□□□□ -0.41
DDX49-212ENST00000601803 DNAJC30Q96LL9 226 aa12.48□□□□□ -0.41
DDX49-212ENST00000601803 TRBV20-1A0A075B6N2 111 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 H3BMM0 161 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 RHODO00212 210 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 P0DMU3 169 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 FAM231AP0DMU4 169 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 FAM231CP0DMU5 169 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 RPL24P83731 157 aaKnown RBP12.47□□□□□ -0.41
DDX49-212ENST00000601803 ZNF415Q09FC8 603 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 ZNRF2Q8NHG8 242 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 DUX5Q96PT3 197 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 SPXQ9BT56 116 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 VCX2Q9H322 139 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 MRPL16Q9NX20 251 aaKnown RBP12.47□□□□□ -0.41
DDX49-212ENST00000601803 IGKV3-20P01619 116 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 PGPEP1Q9NXJ5 209 aa12.47□□□□□ -0.41
DDX49-212ENST00000601803 IGHV3-30P01768 117 aa12.46□□□□□ -0.42
DDX49-212ENST00000601803 IGHV3-30-5P0DP03 117 aa12.46□□□□□ -0.42
DDX49-212ENST00000601803 UBE2D3P61077 147 aa12.46□□□□□ -0.42
DDX49-212ENST00000601803 UBE2D2P62837 147 aa12.46□□□□□ -0.42
DDX49-212ENST00000601803 KLHL30-AS1Q8NEE0 82 aa12.46□□□□□ -0.42
DDX49-212ENST00000601803 PRO0461Q9UI25 63 aa12.46□□□□□ -0.42
DDX49-212ENST00000601803 TEX48A0A1B0GUV7 120 aa12.45□□□□□ -0.42
DDX49-212ENST00000601803 NDUFA11Q86Y39 141 aa12.45□□□□□ -0.42
DDX49-212ENST00000601803 AMELXQ99217 191 aa12.45□□□□□ -0.42
DDX49-212ENST00000601803 IGLV4-3A0A075B6K6 122 aa12.44□□□□□ -0.42
DDX49-212ENST00000601803 TRAV25A0A0B4J276 109 aa12.44□□□□□ -0.42
DDX49-212ENST00000601803 H3BMG7 143 aa12.44□□□□□ -0.42
DDX49-212ENST00000601803 SCGB1A1P11684 91 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms