RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 TMSB15BA0A087X1C1 80 aa15.15■□□□□ 0.02
SSBP4-209ENST00000601357 A0A1B0GV50 99 aa15.15■□□□□ 0.02
SSBP4-209ENST00000601357 SCO2A0A1W2PP80 73 aa15.15■□□□□ 0.02
SSBP4-209ENST00000601357 S100A9P06702 114 aaKnown RBP15.15■□□□□ 0.02
SSBP4-209ENST00000601357 LAGE3Q14657 143 aa15.15■□□□□ 0.02
SSBP4-209ENST00000601357 MLST8Q9BVC4 326 aa15.15■□□□□ 0.02
SSBP4-209ENST00000601357 PSCAO43653 123 aa15.14■□□□□ 0.01
SSBP4-209ENST00000601357 TPT1P13693 172 aaKnown RBP15.14■□□□□ 0.01
SSBP4-209ENST00000601357 KRTAP10-1P60331 282 aa15.14■□□□□ 0.01
SSBP4-209ENST00000601357 M0R381 172 aa15.13■□□□□ 0.01
SSBP4-209ENST00000601357 H2AFB1P0C5Y9 115 aa15.13■□□□□ 0.01
SSBP4-209ENST00000601357 XGP55808 180 aa15.13■□□□□ 0.01
SSBP4-209ENST00000601357 EIF5AP63241 154 aaKnown RBP15.13■□□□□ 0.01
SSBP4-209ENST00000601357 FAM74A4Q5TZK3 123 aa15.13■□□□□ 0.01
SSBP4-209ENST00000601357 TMUB2Q71RG4 321 aa15.13■□□□□ 0.01
SSBP4-209ENST00000601357 ZFP82Q8N141 532 aa15.13■□□□□ 0.01
SSBP4-209ENST00000601357 Q8N3U1 123 aa15.13■□□□□ 0.01
SSBP4-209ENST00000601357 Q9HAA7 133 aa15.13■□□□□ 0.01
SSBP4-209ENST00000601357 A0A087WWC5 75 aa15.12■□□□□ 0.01
SSBP4-209ENST00000601357 A0A087WWL8 130 aa15.12■□□□□ 0.01
SSBP4-209ENST00000601357 PFDN1O60925 122 aa15.12■□□□□ 0.01
SSBP4-209ENST00000601357 CXCL1P09341 107 aa15.11■□□□□ 0.01
SSBP4-209ENST00000601357 BAGE2Q86Y30 109 aa15.1■□□□□ 0.01
SSBP4-209ENST00000601357 GCSHP23434 173 aa15.09■□□□□ 0.01
SSBP4-209ENST00000601357 RPL19P84098 196 aaKnown RBP15.09■□□□□ 0.01
SSBP4-209ENST00000601357 TRBV10-1A0A0K0K1A3 114 aa15.08■□□□□ 0
SSBP4-209ENST00000601357 CCL20P78556 96 aa15.08■□□□□ 0
SSBP4-209ENST00000601357 DAZ4Q86SG3 579 aaKnown RBP15.08■□□□□ 0
SSBP4-209ENST00000601357 Q8N814 137 aa15.08■□□□□ 0
SSBP4-209ENST00000601357 NTN5Q8WTR8 489 aaPredicted RBP15.08■□□□□ 0
SSBP4-209ENST00000601357 DAZ3Q9NR90 486 aaKnown RBP15.08■□□□□ 0
SSBP4-209ENST00000601357 TRAV1-1A0A0B4J248 108 aa15.07■□□□□ 0
SSBP4-209ENST00000601357 OR10AG1Q8NH19 301 aa15.07■□□□□ 0
SSBP4-209ENST00000601357 SSBP4Q9BWG4 385 aaPredicted RBP15.07■□□□□ 0
SSBP4-209ENST00000601357 SNAI2O43623 268 aa15.06■□□□□ 0
SSBP4-209ENST00000601357 C11orf52Q96A22 123 aa15.06■□□□□ 0
SSBP4-209ENST00000601357 MANBALQ9NQG1 85 aa15.06■□□□□ 0
SSBP4-209ENST00000601357 IGLV5-52A0A0A0MRZ9 124 aa15.05■□□□□ -0
SSBP4-209ENST00000601357 TRAV8-3A0A0A6YYJ7 113 aa15.05■□□□□ -0
SSBP4-209ENST00000601357 RPL35P42766 123 aaKnown RBP15.05■□□□□ -0
SSBP4-209ENST00000601357 TM2D2Q9BX73 214 aa15.05■□□□□ -0
SSBP4-209ENST00000601357 OR5AL1P0C617 328 aa15.04■□□□□ -0
SSBP4-209ENST00000601357 RAB5CP51148 216 aa15.04■□□□□ -0
SSBP4-209ENST00000601357 UBE2D3P61077 147 aa15.04■□□□□ -0
SSBP4-209ENST00000601357 UBE2D2P62837 147 aa15.04■□□□□ -0
SSBP4-209ENST00000601357 NIT1Q86X76 327 aa15.04■□□□□ -0
SSBP4-209ENST00000601357 DERL1Q9BUN8 251 aa15.04■□□□□ -0
SSBP4-209ENST00000601357 GNG13Q9P2W3 67 aa15.04■□□□□ -0
SSBP4-209ENST00000601357 TRBV7-3A0A075B6L6 115 aa15.03■□□□□ -0
SSBP4-209ENST00000601357 RAB4BP61018 213 aa15.03■□□□□ -0
SSBP4-209ENST00000601357 RPL36AP83881 106 aaKnown RBP15.03■□□□□ -0
SSBP4-209ENST00000601357 WFDC2Q14508 124 aa15.03■□□□□ -0
SSBP4-209ENST00000601357 TOR2AQ5JU69 321 aa15.03■□□□□ -0
SSBP4-209ENST00000601357 OR10G8Q8NGN5 311 aa15.03■□□□□ -0
SSBP4-209ENST00000601357 RPL36ALQ969Q0 106 aaKnown RBP15.03■□□□□ -0
SSBP4-209ENST00000601357 FAT1Q14517 4588 aa15.03■□□□□ -0
SSBP4-209ENST00000601357 EPM2AB3EWF7 344 aa15.02■□□□□ -0
SSBP4-209ENST00000601357 PRR27Q6MZM9 219 aa15.02■□□□□ -0
SSBP4-209ENST00000601357 TCTE3Q8IZS6 198 aa15.02■□□□□ -0
SSBP4-209ENST00000601357 EIF5AL1Q6IS14 154 aaKnown RBP15.01□□□□□ -0.01
SSBP4-209ENST00000601357 SULT1A2P50226 295 aa15□□□□□ -0.01
SSBP4-209ENST00000601357 TMEM70Q9BUB7 260 aa15□□□□□ -0.01
SSBP4-209ENST00000601357 URGCP-MRPS24S4R325 110 aa15□□□□□ -0.01
SSBP4-209ENST00000601357 MUC21A0A0G2JKD1 596 aa14.99□□□□□ -0.01
SSBP4-209ENST00000601357 MUC21A0A140T8X8 626 aa14.99□□□□□ -0.01
SSBP4-209ENST00000601357 IGLV2-8P01709 118 aa14.99□□□□□ -0.01
SSBP4-209ENST00000601357 CENPWQ5EE01 88 aa14.99□□□□□ -0.01
SSBP4-209ENST00000601357 SPANXN1Q5VSR9 72 aa14.99□□□□□ -0.01
SSBP4-209ENST00000601357 NEXN-AS1Q8NBZ9 246 aa14.99□□□□□ -0.01
SSBP4-209ENST00000601357 CHCHD7Q9BUK0 85 aa14.99□□□□□ -0.01
SSBP4-209ENST00000601357 ZNF56Q15929 161 aa14.98□□□□□ -0.01
SSBP4-209ENST00000601357 DNAJC30Q96LL9 226 aa14.98□□□□□ -0.01
SSBP4-209ENST00000601357 KIF25-AS1Q9Y6Z4 181 aa14.98□□□□□ -0.01
SSBP4-209ENST00000601357 TEX46H3BTG2 121 aa14.97□□□□□ -0.01
SSBP4-209ENST00000601357 MEF2BQ02080 365 aaPredicted RBP14.97□□□□□ -0.01
SSBP4-209ENST00000601357 COX11Q9Y6N1 276 aa14.97□□□□□ -0.01
SSBP4-209ENST00000601357 VPS13BQ7Z7G8 4022 aa14.97□□□□□ -0.01
SSBP4-209ENST00000601357 TRBV6-8A0A0A6YYG3 113 aa14.96□□□□□ -0.01
SSBP4-209ENST00000601357 C19orf71A6NCJ1 209 aa14.96□□□□□ -0.01
SSBP4-209ENST00000601357 Q5VSD8 79 aa14.96□□□□□ -0.01
SSBP4-209ENST00000601357 SMIM12Q96EX1 92 aa14.96□□□□□ -0.01
SSBP4-209ENST00000601357 KLK12Q9UKR0 248 aa14.96□□□□□ -0.01
SSBP4-209ENST00000601357 A0A087WX48 190 aa14.95□□□□□ -0.02
SSBP4-209ENST00000601357 LECT2O14960 151 aa14.95□□□□□ -0.02
SSBP4-209ENST00000601357 IGLC6P0CF74 106 aa14.95□□□□□ -0.02
SSBP4-209ENST00000601357 DNAH8Q96JB1 4490 aa14.95□□□□□ -0.02
SSBP4-209ENST00000601357 RAB19A4D1S5 217 aa14.94□□□□□ -0.02
SSBP4-209ENST00000601357 PDE6DO43924 150 aa14.94□□□□□ -0.02
SSBP4-209ENST00000601357 C1QBP02746 253 aa14.94□□□□□ -0.02
SSBP4-209ENST00000601357 HAMPP81172 84 aa14.94□□□□□ -0.02
SSBP4-209ENST00000601357 ATRAIDQ6UW56 229 aa14.94□□□□□ -0.02
SSBP4-209ENST00000601357 SLC51BQ86UW2 128 aa14.94□□□□□ -0.02
SSBP4-209ENST00000601357 FRZBQ92765 325 aa14.94□□□□□ -0.02
SSBP4-209ENST00000601357 RMI2Q96E14 147 aa14.94□□□□□ -0.02
SSBP4-209ENST00000601357 TRBV20OR9-2A0A075B6H5 130 aa14.93□□□□□ -0.02
SSBP4-209ENST00000601357 GNG4P50150 75 aa14.93□□□□□ -0.02
SSBP4-209ENST00000601357 ELOBQ15370 118 aa14.93□□□□□ -0.02
SSBP4-209ENST00000601357 BAALCQ8WXS3 180 aa14.93□□□□□ -0.02
SSBP4-209ENST00000601357 AP1S3Q96PC3 154 aa14.93□□□□□ -0.02
SSBP4-209ENST00000601357 FAM30AQ9NZY2 134 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms