RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 HTN1P15515 57 aa10.65□□□□□ -0.7
VRK3-217ENST00000599538 TCTAP57738 103 aa10.65□□□□□ -0.7
VRK3-217ENST00000599538 SUMO2P61956 95 aaKnown RBP10.65□□□□□ -0.7
VRK3-217ENST00000599538 LAGE3Q14657 143 aa10.65□□□□□ -0.7
VRK3-217ENST00000599538 C16orf95Q9H693 158 aa10.65□□□□□ -0.7
VRK3-217ENST00000599538 ST20Q9HBF5 79 aa10.65□□□□□ -0.7
VRK3-217ENST00000599538 GOLT1BQ9Y3E0 138 aa10.65□□□□□ -0.7
VRK3-217ENST00000599538 A8MTW9 85 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 SMIM17P0DL12 118 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 HILS1P60008 231 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 LGALS9BQ3B8N2 356 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 LBHQ53QV2 105 aaPredicted RBP10.64□□□□□ -0.71
VRK3-217ENST00000599538 LGALS9CQ6DKI2 356 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 NEGR1Q7Z3B1 354 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 POM121L12Q8N7R1 296 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 JMJD1CQ15652 2540 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 TRAV2A0A0B4J234 112 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 LY6G6DO95868 133 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 STPG4Q8N801 248 aa10.64□□□□□ -0.71
VRK3-217ENST00000599538 ANKRD39Q53RE8 183 aa10.63□□□□□ -0.71
VRK3-217ENST00000599538 FAM74A4Q5TZK3 123 aa10.63□□□□□ -0.71
VRK3-217ENST00000599538 ZNF418Q8TF45 676 aaPredicted RBP10.63□□□□□ -0.71
VRK3-217ENST00000599538 TSSC4Q9Y5U2 329 aaPredicted RBP10.63□□□□□ -0.71
VRK3-217ENST00000599538 HSBP1L1C9JCN9 74 aa10.63□□□□□ -0.71
VRK3-217ENST00000599538 ODF3L2Q3SX64 289 aa10.63□□□□□ -0.71
VRK3-217ENST00000599538 SUMO4Q6EEV6 95 aa10.63□□□□□ -0.71
VRK3-217ENST00000599538 CBY3A6NI87 242 aa10.62□□□□□ -0.71
VRK3-217ENST00000599538 CRYGDP07320 174 aa10.61□□□□□ -0.71
VRK3-217ENST00000599538 ODF1Q14990 250 aa10.61□□□□□ -0.71
VRK3-217ENST00000599538 SPAG8Q99932 426 aaPredicted RBP10.61□□□□□ -0.71
VRK3-217ENST00000599538 C20orf78Q9BR46 151 aa10.61□□□□□ -0.71
VRK3-217ENST00000599538 ADARB2-AS1A8MUL3 147 aa10.61□□□□□ -0.71
VRK3-217ENST00000599538 F5H697 171 aa10.61□□□□□ -0.71
VRK3-217ENST00000599538 NUDT3O95989 172 aa10.61□□□□□ -0.71
VRK3-217ENST00000599538 PRSS1P07477 247 aa10.61□□□□□ -0.71
VRK3-217ENST00000599538 NUTF2P61970 127 aaKnown RBP10.6□□□□□ -0.71
VRK3-217ENST00000599538 CSTL1Q9H114 145 aa10.6□□□□□ -0.71
VRK3-217ENST00000599538 NOTCH3Q9UM47 2321 aa10.6□□□□□ -0.71
VRK3-217ENST00000599538 HINT1P49773 126 aaPredicted RBP10.6□□□□□ -0.71
VRK3-217ENST00000599538 ZNF876PQ49A33 203 aa10.6□□□□□ -0.71
VRK3-217ENST00000599538 MRPL52Q86TS9 123 aaKnown RBP10.6□□□□□ -0.71
VRK3-217ENST00000599538 TMEM160Q9NX00 188 aa10.6□□□□□ -0.71
VRK3-217ENST00000599538 MRPS16Q9Y3D3 137 aaKnown RBP10.6□□□□□ -0.71
VRK3-217ENST00000599538 FN1P02751 2386 aaKnown RBP10.59□□□□□ -0.71
VRK3-217ENST00000599538 PROK1P58294 105 aa10.59□□□□□ -0.71
VRK3-217ENST00000599538 MORN3Q6PF18 240 aaPredicted RBP10.59□□□□□ -0.71
VRK3-217ENST00000599538 SLC25A34Q6PIV7 304 aa10.59□□□□□ -0.71
VRK3-217ENST00000599538 KRTAP10-3P60369 221 aa10.58□□□□□ -0.72
VRK3-217ENST00000599538 NSUN5P1Q3KNT7 163 aa10.58□□□□□ -0.72
VRK3-217ENST00000599538 NSD1Q96L73 2696 aaPredicted RBP10.58□□□□□ -0.72
VRK3-217ENST00000599538 TRGV11A0A075B6L2 103 aa10.58□□□□□ -0.72
VRK3-217ENST00000599538 SYT8Q8NBV8 401 aa10.58□□□□□ -0.72
VRK3-217ENST00000599538 HIVEP1P15822 2718 aa10.58□□□□□ -0.72
VRK3-217ENST00000599538 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
VRK3-217ENST00000599538 SCGB2A2Q13296 93 aa10.57□□□□□ -0.72
VRK3-217ENST00000599538 ZNF56Q15929 161 aa10.57□□□□□ -0.72
VRK3-217ENST00000599538 ZMAT4Q9H898 229 aa10.57□□□□□ -0.72
VRK3-217ENST00000599538 HHLA3Q9XRX5 114 aa10.57□□□□□ -0.72
VRK3-217ENST00000599538 C2CD3Q4AC94 2353 aa10.57□□□□□ -0.72
VRK3-217ENST00000599538 ATP5LO75964 103 aa10.57□□□□□ -0.72
VRK3-217ENST00000599538 COX8AP10176 69 aa10.57□□□□□ -0.72
VRK3-217ENST00000599538 ORMDL2Q53FV1 153 aa10.57□□□□□ -0.72
VRK3-217ENST00000599538 TOMM6Q96B49 74 aa10.57□□□□□ -0.72
VRK3-217ENST00000599538 XCL2Q9UBD3 114 aa10.57□□□□□ -0.72
VRK3-217ENST00000599538 NACAE9PAV3 2078 aa10.56□□□□□ -0.72
VRK3-217ENST00000599538 TRAV25A0A0B4J276 109 aa10.56□□□□□ -0.72
VRK3-217ENST00000599538 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
VRK3-217ENST00000599538 M0QY20 66 aa10.56□□□□□ -0.72
VRK3-217ENST00000599538 SAP30O75446 220 aa10.56□□□□□ -0.72
VRK3-217ENST00000599538 FGF6P10767 208 aa10.56□□□□□ -0.72
VRK3-217ENST00000599538 C2orf66Q6UXQ4 117 aa10.56□□□□□ -0.72
VRK3-217ENST00000599538 MRPL35Q9NZE8 188 aaKnown RBP10.56□□□□□ -0.72
VRK3-217ENST00000599538 IGHV3-73A0A0B4J1V6 119 aa10.55□□□□□ -0.72
VRK3-217ENST00000599538 NDUFA7O95182 113 aa10.55□□□□□ -0.72
VRK3-217ENST00000599538 C2orf91Q6ZV80 131 aa10.55□□□□□ -0.72
VRK3-217ENST00000599538 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
VRK3-217ENST00000599538 IGKV2D-26A0A0A0MRZ7 120 aa10.55□□□□□ -0.72
VRK3-217ENST00000599538 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
VRK3-217ENST00000599538 PPP1R17O96001 155 aa10.55□□□□□ -0.72
VRK3-217ENST00000599538 MPV17L2Q567V2 206 aa10.55□□□□□ -0.72
VRK3-217ENST00000599538 SCGB3A1Q96QR1 104 aa10.55□□□□□ -0.72
VRK3-217ENST00000599538 LINC01587Q99440 93 aa10.55□□□□□ -0.72
VRK3-217ENST00000599538 PCP2Q8IVA1 136 aa10.54□□□□□ -0.72
VRK3-217ENST00000599538 OR11H12B2RN74 326 aa10.54□□□□□ -0.72
VRK3-217ENST00000599538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.54□□□□□ -0.72
VRK3-217ENST00000599538 IGKCP01834 107 aa10.54□□□□□ -0.72
VRK3-217ENST00000599538 AZU1P20160 251 aa10.54□□□□□ -0.72
VRK3-217ENST00000599538 STHQ8IWL8 128 aa10.54□□□□□ -0.72
VRK3-217ENST00000599538 C11orf72Q8NBR9 251 aa10.54□□□□□ -0.72
VRK3-217ENST00000599538 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
VRK3-217ENST00000599538 P0DMU3 169 aa10.53□□□□□ -0.72
VRK3-217ENST00000599538 FAM231AP0DMU4 169 aa10.53□□□□□ -0.72
VRK3-217ENST00000599538 FAM231CP0DMU5 169 aa10.53□□□□□ -0.72
VRK3-217ENST00000599538 RPL39P62891 51 aaKnown RBP10.53□□□□□ -0.72
VRK3-217ENST00000599538 ZFP2Q6ZN57 461 aa10.53□□□□□ -0.72
VRK3-217ENST00000599538 Q9UF83 564 aa10.53□□□□□ -0.72
VRK3-217ENST00000599538 VWFP04275 2813 aa10.53□□□□□ -0.72
VRK3-217ENST00000599538 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.72
VRK3-217ENST00000599538 A0A087WX48 190 aa10.52□□□□□ -0.72
VRK3-217ENST00000599538 K7EMI3 77 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms