RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 NFE4Q86UQ8 179 aa15.33■□□□□ 0.04
CCDC9-204ENST00000599398 C9orf62Q8N4C0 152 aa15.33■□□□□ 0.04
CCDC9-204ENST00000599398 C14orf178Q8N769 122 aaPredicted RBP15.33■□□□□ 0.04
CCDC9-204ENST00000599398 SFRP2Q96HF1 295 aa15.33■□□□□ 0.04
CCDC9-204ENST00000599398 MSRB1Q9NZV6 116 aa15.33■□□□□ 0.04
CCDC9-204ENST00000599398 MEF2BQ02080 365 aaPredicted RBP15.32■□□□□ 0.04
CCDC9-204ENST00000599398 C10orf126Q8N4M7 172 aa15.32■□□□□ 0.04
CCDC9-204ENST00000599398 CENPWQ5EE01 88 aa15.31■□□□□ 0.04
CCDC9-204ENST00000599398 LELP1Q5T871 98 aa15.31■□□□□ 0.04
CCDC9-204ENST00000599398 CXCL1P09341 107 aa15.3■□□□□ 0.04
CCDC9-204ENST00000599398 Q9UF83 564 aa15.3■□□□□ 0.04
CCDC9-204ENST00000599398 PDE6DO43924 150 aa15.29■□□□□ 0.04
CCDC9-204ENST00000599398 BCL2P10415 239 aa15.29■□□□□ 0.04
CCDC9-204ENST00000599398 LINC01556Q5JQF7 62 aa15.29■□□□□ 0.04
CCDC9-204ENST00000599398 OR10AG1Q8NH19 301 aa15.29■□□□□ 0.04
CCDC9-204ENST00000599398 MED9Q9NWA0 146 aa15.29■□□□□ 0.04
CCDC9-204ENST00000599398 BOLA1Q9Y3E2 137 aa15.29■□□□□ 0.04
CCDC9-204ENST00000599398 RAB19A4D1S5 217 aa15.28■□□□□ 0.04
CCDC9-204ENST00000599398 GNG4P50150 75 aa15.28■□□□□ 0.04
CCDC9-204ENST00000599398 MUC21A0A0G2JKD1 596 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 MUC21A0A140T8X8 626 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 EREGO14944 169 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 IGHV3-30P01768 117 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 IGHV3-33P01772 117 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 LINC00694P0DN24 101 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 IGHV3-30-3P0DP02 117 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 IGHV3-30-5P0DP03 117 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 KRTAP10-2P60368 255 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 ERVFC1-1P60608 527 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 DAZAP1Q96EP5 407 aaKnown RBP15.27■□□□□ 0.04
CCDC9-204ENST00000599398 VAX2Q9UIW0 290 aa15.27■□□□□ 0.04
CCDC9-204ENST00000599398 SSTP61278 116 aa15.26■□□□□ 0.03
CCDC9-204ENST00000599398 SPANXN1Q5VSR9 72 aa15.26■□□□□ 0.03
CCDC9-204ENST00000599398 SNAI2O43623 268 aa15.25■□□□□ 0.03
CCDC9-204ENST00000599398 IGLV2-8P01709 118 aa15.25■□□□□ 0.03
CCDC9-204ENST00000599398 ALKAL2Q6UX46 152 aa15.25■□□□□ 0.03
CCDC9-204ENST00000599398 OR5AL1P0C617 328 aa15.24■□□□□ 0.03
CCDC9-204ENST00000599398 TAGLN2P37802 199 aaKnown RBP15.24■□□□□ 0.03
CCDC9-204ENST00000599398 SSBP4Q9BWG4 385 aaPredicted RBP15.24■□□□□ 0.03
CCDC9-204ENST00000599398 RYR1P21817 5038 aa15.23■□□□□ 0.03
CCDC9-204ENST00000599398 ZNF56Q15929 161 aa15.23■□□□□ 0.03
CCDC9-204ENST00000599398 OR2D3Q8NGH3 330 aa15.23■□□□□ 0.03
CCDC9-204ENST00000599398 SMIM12Q96EX1 92 aa15.23■□□□□ 0.03
CCDC9-204ENST00000599398 TPPP3Q9BW30 176 aa15.23■□□□□ 0.03
CCDC9-204ENST00000599398 A0A087WWC5 75 aa15.22■□□□□ 0.03
CCDC9-204ENST00000599398 GZMBP10144 247 aa15.22■□□□□ 0.03
CCDC9-204ENST00000599398 Q9HAA7 133 aa15.22■□□□□ 0.03
CCDC9-204ENST00000599398 LRP1BQ9NZR2 4599 aa15.22■□□□□ 0.03
CCDC9-204ENST00000599398 TRBV10-1A0A0K0K1A3 114 aa15.21■□□□□ 0.03
CCDC9-204ENST00000599398 IBA57-AS1B1ANH7 110 aa15.21■□□□□ 0.03
CCDC9-204ENST00000599398 PSCAO43653 123 aa15.21■□□□□ 0.03
CCDC9-204ENST00000599398 RPS20P60866 119 aaKnown RBP15.21■□□□□ 0.03
CCDC9-204ENST00000599398 BLOC1S1P78537 153 aa15.21■□□□□ 0.03
CCDC9-204ENST00000599398 RPL36AP83881 106 aaKnown RBP15.21■□□□□ 0.03
CCDC9-204ENST00000599398 RPL36ALQ969Q0 106 aaKnown RBP15.21■□□□□ 0.03
CCDC9-204ENST00000599398 TRBV20OR9-2A0A075B6H5 130 aa15.2■□□□□ 0.02
CCDC9-204ENST00000599398 A0A087WTM6 91 aa15.2■□□□□ 0.02
CCDC9-204ENST00000599398 A0A1B0GVG6 124 aa15.2■□□□□ 0.02
CCDC9-204ENST00000599398 C19orf71A6NCJ1 209 aa15.2■□□□□ 0.02
CCDC9-204ENST00000599398 P01737 135 aa15.2■□□□□ 0.02
CCDC9-204ENST00000599398 NKX2-5P52952 324 aaPredicted RBP15.2■□□□□ 0.02
CCDC9-204ENST00000599398 RAB4BP61018 213 aa15.2■□□□□ 0.02
CCDC9-204ENST00000599398 BIN3Q9NQY0 253 aa15.2■□□□□ 0.02
CCDC9-204ENST00000599398 F5H697 171 aa15.19■□□□□ 0.02
CCDC9-204ENST00000599398 SMIM17P0DL12 118 aa15.19■□□□□ 0.02
CCDC9-204ENST00000599398 Q8N3U1 123 aa15.19■□□□□ 0.02
CCDC9-204ENST00000599398 FER1L6-AS1Q8NA97 138 aa15.19■□□□□ 0.02
CCDC9-204ENST00000599398 TRBV7-3A0A075B6L6 115 aa15.18■□□□□ 0.02
CCDC9-204ENST00000599398 RBFOX3A6NFN3 312 aa15.18■□□□□ 0.02
CCDC9-204ENST00000599398 FUSP35637 526 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCDC9-204ENST00000599398 AP1S3Q96PC3 154 aa15.18■□□□□ 0.02
CCDC9-204ENST00000599398 XKRY2A2RUG3 117 aa15.17■□□□□ 0.02
CCDC9-204ENST00000599398 PGPEP1Q9NXJ5 209 aa15.17■□□□□ 0.02
CCDC9-204ENST00000599398 DNAH5Q8TE73 4624 aa15.16■□□□□ 0.02
CCDC9-204ENST00000599398 CDK2AP2O75956 126 aa15.16■□□□□ 0.02
CCDC9-204ENST00000599398 IGLC6P0CF74 106 aa15.16■□□□□ 0.02
CCDC9-204ENST00000599398 UBE2D3P61077 147 aa15.16■□□□□ 0.02
CCDC9-204ENST00000599398 UBE2D2P62837 147 aa15.16■□□□□ 0.02
CCDC9-204ENST00000599398 URGCP-MRPS24S4R325 110 aa15.16■□□□□ 0.02
CCDC9-204ENST00000599398 LAGE3Q14657 143 aa15.15■□□□□ 0.02
CCDC9-204ENST00000599398 DAZ4Q86SG3 579 aaKnown RBP15.15■□□□□ 0.02
CCDC9-204ENST00000599398 NEXN-AS1Q8NBZ9 246 aa15.15■□□□□ 0.02
CCDC9-204ENST00000599398 DAZ3Q9NR90 486 aaKnown RBP15.15■□□□□ 0.02
CCDC9-204ENST00000599398 OR10G8Q8NGN5 311 aa15.14■□□□□ 0.01
CCDC9-204ENST00000599398 MGPP08493 103 aa15.13■□□□□ 0.01
CCDC9-204ENST00000599398 CACNG7P62955 275 aa15.13■□□□□ 0.01
CCDC9-204ENST00000599398 CDPF1Q6NVV7 123 aa15.13■□□□□ 0.01
CCDC9-204ENST00000599398 NUDT10Q8NFP7 164 aa15.13■□□□□ 0.01
CCDC9-204ENST00000599398 NUDT11Q96G61 164 aa15.13■□□□□ 0.01
CCDC9-204ENST00000599398 KIF25-AS1Q9Y6Z4 181 aa15.13■□□□□ 0.01
CCDC9-204ENST00000599398 CEBPGP53567 150 aa15.12■□□□□ 0.01
CCDC9-204ENST00000599398 TOR2AQ5JU69 321 aa15.12■□□□□ 0.01
CCDC9-204ENST00000599398 LYZL1Q6UWQ5 148 aa15.12■□□□□ 0.01
CCDC9-204ENST00000599398 NIT1Q86X76 327 aa15.12■□□□□ 0.01
CCDC9-204ENST00000599398 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.12■□□□□ 0.01
CCDC9-204ENST00000599398 LYPD6BQ8NI32 183 aa15.12■□□□□ 0.01
CCDC9-204ENST00000599398 OCC1Q8TAD7 63 aa15.12■□□□□ 0.01
CCDC9-204ENST00000599398 HSPG2P98160 4391 aa15.12■□□□□ 0.01
CCDC9-204ENST00000599398 F2Z2F3 143 aa15.11■□□□□ 0.01
CCDC9-204ENST00000599398 TMEM250H0YL14 139 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms