RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 FAM210BQ96KR6 192 aa5.34□□□□□ -1.55
SMAD4-210ENST00000590061 GNB1LQ9BYB4 327 aa5.34□□□□□ -1.55
SMAD4-210ENST00000590061 TRAV12-2A0A075B6T6 113 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 IGKV3D-20A0A0C4DH25 116 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 A8MWV9 139 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 G3V4G9 280 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 RHODO00212 210 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 CRXO43186 299 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-210ENST00000590061 SPRY2O43597 315 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 SNAI2O43623 268 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 HLA-DQA1P01909 254 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 PPBPP02775 128 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 IGLC6P0CF74 106 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 NHLRC4P0CG21 123 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-210ENST00000590061 DAZ2Q13117 558 aaKnown RBP5.33□□□□□ -1.56
SMAD4-210ENST00000590061 TWIST1Q15672 202 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 LINC00322Q6ZN03 302 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-210ENST00000590061 NUP35Q8NFH5 326 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 RNF183Q96D59 192 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 AP1S3Q96PC3 154 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 SCRT2Q9NQ03 307 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 TIMM8BQ9Y5J9 83 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-210ENST00000590061 URGCP-MRPS24S4R325 110 aa5.33□□□□□ -1.56
SMAD4-210ENST00000590061 IGHV3-16A0A0C4DH30 117 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 RBMY1BA6NDE4 496 aaKnown RBP5.32□□□□□ -1.56
SMAD4-210ENST00000590061 RBMY1EA6NEQ0 496 aaKnown RBP5.32□□□□□ -1.56
SMAD4-210ENST00000590061 LYRM9A8MSI8 78 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 H7C1H1 209 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 RBMY1DP0C7P1 496 aaKnown RBP5.32□□□□□ -1.56
SMAD4-210ENST00000590061 ARMS2P0C7Q2 107 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 TCL1AP56279 114 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 DEFB1P60022 68 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 KRTAP10-11P60412 298 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 ELOBQ15370 118 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 MUC21Q5SSG8 566 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 LYZL1Q6UWQ5 148 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 CSNK1G2-AS1Q8NCQ2 148 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 PGLYRP4Q96LB8 373 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 LAMTOR2Q9Y2Q5 125 aa5.32□□□□□ -1.56
SMAD4-210ENST00000590061 TMSB15BA0A087X1C1 80 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 NXPH4O95158 308 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 FRMD6-AS1P0C7T7 363 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 HTN1P15515 57 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 RAB5AP20339 215 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 FXYD7P58549 80 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 ZNF876PQ49A33 203 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 DEFB121Q5J5C9 76 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 PRR9Q5T870 116 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 OR11H2Q8NH07 326 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 GTSF1Q8WW33 167 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 RASL10AQ92737 203 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 C9orf85Q96MD7 179 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 OVOL2Q9BRP0 275 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 TMEM191AQ9H0A3 160 aa5.31□□□□□ -1.56
SMAD4-210ENST00000590061 IGHV3OR16-12A0A075B7B8 117 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 A0A0U1RRA0 63 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 GRIFINA4D1Z8 144 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 TMEM238C9JI98 176 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 H3BVH4 76 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 TCAPO15273 167 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 GIG44P09565 113 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-210ENST00000590061 SPART-AS1P0CW21 52 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 NTF3P20783 257 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 ATRAIDQ6UW56 229 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 ZFP2Q6ZN57 461 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 CBLN2Q8IUK8 224 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 C1orf158Q8N1D5 194 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 GATD1Q8NB37 220 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 MRAP2Q96G30 205 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 PACRGQ96M98 296 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-210ENST00000590061 C18orf15Q96N68 181 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 WFDC10AQ9H1F0 79 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 DPH3P1Q9H4G8 78 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 TRAPPC1Q9Y5R8 145 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 NBEAL2Q6ZNJ1 2754 aa5.3□□□□□ -1.56
SMAD4-210ENST00000590061 A0A1B0GXF2 115 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 COLCA2A8K830 154 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 C1orf196B1AJZ1 125 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 M0R381 172 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 PHOX2AO14813 284 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 GNRH2O43555 120 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 APCSP02743 223 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 RNASE3P12724 160 aaKnown RBP5.29□□□□□ -1.56
SMAD4-210ENST00000590061 RPS10P46783 165 aaKnown RBP5.29□□□□□ -1.56
SMAD4-210ENST00000590061 SERTAD4-AS1Q5TG53 156 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 MTURNQ8N3F0 131 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 C11orf68Q9H3H3 251 aaKnown RBP5.29□□□□□ -1.56
SMAD4-210ENST00000590061 C11orf21Q9P2W6 132 aa5.29□□□□□ -1.56
SMAD4-210ENST00000590061 TRGV2A0A075B6R0 118 aa5.28□□□□□ -1.56
SMAD4-210ENST00000590061 A0A1B0GV72 72 aa5.28□□□□□ -1.56
SMAD4-210ENST00000590061 LINC01549A6NIU2 74 aa5.28□□□□□ -1.56
SMAD4-210ENST00000590061 K7EMI3 77 aa5.28□□□□□ -1.56
SMAD4-210ENST00000590061 SPINK4O60575 86 aa5.28□□□□□ -1.56
SMAD4-210ENST00000590061 GZMBP10144 247 aa5.28□□□□□ -1.56
SMAD4-210ENST00000590061 AZU1P20160 251 aa5.28□□□□□ -1.56
SMAD4-210ENST00000590061 RAB5BP61020 215 aa5.28□□□□□ -1.56
SMAD4-210ENST00000590061 FABP9Q0Z7S8 132 aa5.28□□□□□ -1.56
SMAD4-210ENST00000590061 DEFB135Q30KP9 77 aa5.28□□□□□ -1.56
SMAD4-210ENST00000590061 C6orf226Q5I0X4 101 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms